data_A1L2A # _chem_comp.id A1L2A _chem_comp.name "2-methyl-5-(4-methylpiperazin-1-yl)-~{N}-(1-quinolin-4-ylcyclopropyl)benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H28 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-06-06 _chem_comp.pdbx_modified_date 2025-06-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 400.516 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1L2A _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8ZSE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1L2A C16 C1 C 0 1 Y N N N N N -5.694 -22.444 31.462 -5.223 1.198 2.137 C16 A1L2A 1 A1L2A C17 C2 C 0 1 Y N N N N N -1.725 -28.377 29.247 0.644 -1.382 -0.115 C17 A1L2A 2 A1L2A C22 C3 C 0 1 N N N N N N 3.984 -25.656 28.575 6.539 0.135 -0.030 C22 A1L2A 3 A1L2A C21 C4 C 0 1 N N N N N N 3.145 -26.869 29.010 5.336 -0.723 0.368 C21 A1L2A 4 A1L2A N23 N1 N 0 1 N N N N N N 3.806 -24.445 29.416 6.331 1.513 0.436 N23 A1L2A 5 A1L2A C26 C5 C 0 1 N N N N N N 1.406 -25.289 29.937 3.907 1.227 0.249 C26 A1L2A 6 A1L2A C19 C6 C 0 1 Y N N N N N 0.667 -27.740 29.114 3.004 -0.949 0.065 C19 A1L2A 7 A1L2A C18 C7 C 0 1 Y N N N N N -0.705 -27.420 29.283 1.750 -0.581 -0.400 C18 A1L2A 8 A1L2A C13 C8 C 0 1 Y N N N N N -4.609 -23.528 29.020 -3.066 2.063 0.586 C13 A1L2A 9 A1L2A C11 C9 C 0 1 Y N N N N N -5.920 -23.840 31.122 -4.833 0.440 1.019 C11 A1L2A 10 A1L2A C12 C10 C 0 1 Y N N N N N -5.396 -24.373 29.926 -3.739 0.882 0.235 C12 A1L2A 11 A1L2A C14 C11 C 0 1 Y N N N N N -4.382 -22.183 29.349 -3.476 2.774 1.673 C14 A1L2A 12 A1L2A C02 C12 C 0 1 N N N N N N -3.193 -27.929 29.343 -0.696 -0.996 -0.607 C02 A1L2A 13 A1L2A C04 C13 C 0 1 N N N N N N -5.124 -26.494 28.326 -2.193 0.552 -1.748 C04 A1L2A 14 A1L2A C05 C14 C 0 1 N N N N N N -5.601 -26.501 26.814 -2.318 1.888 -2.484 C05 A1L2A 15 A1L2A C06 C15 C 0 1 N N N N N N -6.208 -27.488 27.807 -2.410 0.573 -3.262 C06 A1L2A 16 A1L2A C07 C16 C 0 1 Y N N N N N -5.631 -25.779 29.591 -3.350 0.122 -0.884 C07 A1L2A 17 A1L2A C08 C17 C 0 1 Y N N N N N -6.378 -26.540 30.515 -4.051 -1.016 -1.166 C08 A1L2A 18 A1L2A C09 C18 C 0 1 Y N N N N N -6.894 -25.930 31.737 -5.117 -1.394 -0.353 C09 A1L2A 19 A1L2A C15 C19 C 0 1 Y N N N N N -4.929 -21.642 30.583 -4.552 2.341 2.445 C15 A1L2A 20 A1L2A C24 C20 C 0 1 N N N N N N 4.573 -23.405 28.874 7.500 2.351 0.139 C24 A1L2A 21 A1L2A C25 C21 C 0 1 N N N N N N 2.357 -24.082 29.557 5.110 2.085 -0.148 C25 A1L2A 22 A1L2A C27 C22 C 0 1 Y N N N N N 0.998 -29.107 28.873 3.154 -2.112 0.812 C27 A1L2A 23 A1L2A C28 C23 C 0 1 Y N N N N N -0.045 -30.108 28.827 2.059 -2.911 1.084 C28 A1L2A 24 A1L2A C29 C24 C 0 1 Y N N N N N -1.418 -29.734 29.006 0.807 -2.550 0.630 C29 A1L2A 25 A1L2A C30 C25 C 0 1 N N N N N N -2.539 -30.763 28.934 -0.386 -3.418 0.941 C30 A1L2A 26 A1L2A N03 N2 N 0 1 N N N N N N -3.758 -27.021 28.409 -0.865 0.170 -1.260 N03 A1L2A 27 A1L2A N10 N3 N 0 1 Y N N N N N -6.668 -24.618 32.028 -5.477 -0.684 0.689 N10 A1L2A 28 A1L2A N20 N4 N 0 1 N N N N N N 1.667 -26.619 29.176 4.115 -0.151 -0.217 N20 A1L2A 29 A1L2A O01 O1 O 0 1 N N N N N N -3.944 -28.390 30.218 -1.646 -1.732 -0.422 O01 A1L2A 30 A1L2A H1 H1 H 0 1 N N N N N N -6.103 -22.027 32.370 -6.055 0.876 2.747 H1 A1L2A 31 A1L2A H2 H2 H 0 1 N N N N N N 5.045 -25.944 28.609 7.442 -0.271 0.426 H2 A1L2A 32 A1L2A H3 H3 H 0 1 N N N N N N 3.706 -25.400 27.542 6.646 0.130 -1.115 H3 A1L2A 33 A1L2A H4 H4 H 0 1 N N N N N N 3.271 -27.656 28.252 5.475 -1.739 -0.003 H4 A1L2A 34 A1L2A H5 H5 H 0 1 N N N N N N 3.538 -27.223 29.975 5.245 -0.741 1.454 H5 A1L2A 35 A1L2A H7 H7 H 0 1 N N N N N N 0.370 -24.980 29.732 3.800 1.231 1.334 H7 A1L2A 36 A1L2A H8 H8 H 0 1 N N N N N N 1.524 -25.486 31.013 3.004 1.633 -0.207 H8 A1L2A 37 A1L2A H9 H9 H 0 1 N N N N N N -0.975 -26.387 29.447 1.631 0.322 -0.980 H9 A1L2A 38 A1L2A H10 H10 H 0 1 N N N N N N -4.207 -23.939 28.106 -2.230 2.409 -0.005 H10 A1L2A 39 A1L2A H11 H11 H 0 1 N N N N N N -3.804 -21.553 28.689 -2.958 3.682 1.942 H11 A1L2A 40 A1L2A H12 H12 H 0 1 N N N N N N -4.924 -26.861 26.026 -3.238 2.455 -2.344 H12 A1L2A 41 A1L2A H13 H13 H 0 1 N N N N N N -6.207 -25.670 26.425 -1.412 2.482 -2.606 H13 A1L2A 42 A1L2A H14 H14 H 0 1 N N N N N N -7.254 -27.368 28.124 -1.565 0.303 -3.896 H14 A1L2A 43 A1L2A H15 H15 H 0 1 N N N N N N -5.971 -28.559 27.725 -3.391 0.276 -3.634 H15 A1L2A 44 A1L2A H16 H16 H 0 1 N N N N N N -6.570 -27.584 30.316 -3.779 -1.622 -2.017 H16 A1L2A 45 A1L2A H17 H17 H 0 1 N N N N N N -7.468 -26.532 32.426 -5.663 -2.297 -0.588 H17 A1L2A 46 A1L2A H18 H18 H 0 1 N N N N N N -4.748 -20.607 30.833 -4.859 2.922 3.302 H18 A1L2A 47 A1L2A H19 H19 H 0 1 N N N N N N 4.451 -22.500 29.488 7.670 2.369 -0.937 H19 A1L2A 48 A1L2A H20 H20 H 0 1 N N N N N N 5.633 -23.699 28.862 7.319 3.366 0.495 H20 A1L2A 49 A1L2A H21 H21 H 0 1 N N N N N N 4.238 -23.199 27.847 8.377 1.942 0.640 H21 A1L2A 50 A1L2A H22 H22 H 0 1 N N N N N N 2.270 -23.317 30.343 4.971 3.100 0.222 H22 A1L2A 51 A1L2A H23 H23 H 0 1 N N N N N N 2.014 -23.664 28.599 5.201 2.102 -1.235 H23 A1L2A 52 A1L2A H24 H24 H 0 1 N N N N N N 2.028 -29.394 28.725 4.131 -2.397 1.173 H24 A1L2A 53 A1L2A H25 H25 H 0 1 N N N N N N 0.212 -31.143 28.657 2.182 -3.813 1.664 H25 A1L2A 54 A1L2A H26 H26 H 0 1 N N N N N N -2.724 -31.175 29.937 -0.907 -3.021 1.812 H26 A1L2A 55 A1L2A H27 H27 H 0 1 N N N N N N -3.455 -30.282 28.561 -1.061 -3.427 0.086 H27 A1L2A 56 A1L2A H28 H28 H 0 1 N N N N N N -2.248 -31.575 28.252 -0.051 -4.434 1.150 H28 A1L2A 57 A1L2A H29 H29 H 0 1 N N N N N N -3.131 -26.692 27.703 -0.107 0.757 -1.408 H29 A1L2A 58 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1L2A C05 C06 SING N N 1 A1L2A C05 C04 SING N N 2 A1L2A C06 C04 SING N N 3 A1L2A C04 N03 SING N N 4 A1L2A C04 C07 SING N N 5 A1L2A N03 C02 SING N N 6 A1L2A C22 C21 SING N N 7 A1L2A C22 N23 SING N N 8 A1L2A C28 C27 DOUB Y N 9 A1L2A C28 C29 SING Y N 10 A1L2A C27 C19 SING Y N 11 A1L2A C24 N23 SING N N 12 A1L2A C30 C29 SING N N 13 A1L2A C29 C17 DOUB Y N 14 A1L2A C21 N20 SING N N 15 A1L2A C13 C14 DOUB Y N 16 A1L2A C13 C12 SING Y N 17 A1L2A C19 N20 SING N N 18 A1L2A C19 C18 DOUB Y N 19 A1L2A N20 C26 SING N N 20 A1L2A C17 C18 SING Y N 21 A1L2A C17 C02 SING N N 22 A1L2A C02 O01 DOUB N N 23 A1L2A C14 C15 SING Y N 24 A1L2A N23 C25 SING N N 25 A1L2A C25 C26 SING N N 26 A1L2A C07 C12 DOUB Y N 27 A1L2A C07 C08 SING Y N 28 A1L2A C12 C11 SING Y N 29 A1L2A C08 C09 DOUB Y N 30 A1L2A C15 C16 DOUB Y N 31 A1L2A C11 C16 SING Y N 32 A1L2A C11 N10 DOUB Y N 33 A1L2A C09 N10 SING Y N 34 A1L2A C16 H1 SING N N 35 A1L2A C22 H2 SING N N 36 A1L2A C22 H3 SING N N 37 A1L2A C21 H4 SING N N 38 A1L2A C21 H5 SING N N 39 A1L2A C26 H7 SING N N 40 A1L2A C26 H8 SING N N 41 A1L2A C18 H9 SING N N 42 A1L2A C13 H10 SING N N 43 A1L2A C14 H11 SING N N 44 A1L2A C05 H12 SING N N 45 A1L2A C05 H13 SING N N 46 A1L2A C06 H14 SING N N 47 A1L2A C06 H15 SING N N 48 A1L2A C08 H16 SING N N 49 A1L2A C09 H17 SING N N 50 A1L2A C15 H18 SING N N 51 A1L2A C24 H19 SING N N 52 A1L2A C24 H20 SING N N 53 A1L2A C24 H21 SING N N 54 A1L2A C25 H22 SING N N 55 A1L2A C25 H23 SING N N 56 A1L2A C27 H24 SING N N 57 A1L2A C28 H25 SING N N 58 A1L2A C30 H26 SING N N 59 A1L2A C30 H27 SING N N 60 A1L2A C30 H28 SING N N 61 A1L2A N03 H29 SING N N 62 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1L2A InChI InChI 1.06 "InChI=1S/C25H28N4O/c1-18-7-8-19(29-15-13-28(2)14-16-29)17-21(18)24(30)27-25(10-11-25)22-9-12-26-23-6-4-3-5-20(22)23/h3-9,12,17H,10-11,13-16H2,1-2H3,(H,27,30)" A1L2A InChIKey InChI 1.06 LZLUSPLHJLQEPU-UHFFFAOYSA-N A1L2A SMILES_CANONICAL CACTVS 3.385 "CN1CCN(CC1)c2ccc(C)c(c2)C(=O)NC3(CC3)c4ccnc5ccccc45" A1L2A SMILES CACTVS 3.385 "CN1CCN(CC1)c2ccc(C)c(c2)C(=O)NC3(CC3)c4ccnc5ccccc45" A1L2A SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1C(=O)NC2(CC2)c3ccnc4c3cccc4)N5CCN(CC5)C" A1L2A SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1C(=O)NC2(CC2)c3ccnc4c3cccc4)N5CCN(CC5)C" # _pdbx_chem_comp_identifier.comp_id A1L2A _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-methyl-5-(4-methylpiperazin-1-yl)-~{N}-(1-quinolin-4-ylcyclopropyl)benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1L2A "Create component" 2024-06-06 PDBJ A1L2A "Initial release" 2025-06-11 RCSB #