data_A1L2I # _chem_comp.id A1L2I _chem_comp.name Acarviosin _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H25 N O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(1~{S},2~{S},3~{R},6~{S})-4-(hydroxymethyl)-6-[[(2~{R},3~{S},4~{S},5~{R},6~{S})-6-methoxy-2-methyl-4,5-bis(oxidanyl)oxan-3-yl]amino]cyclohex-4-ene-1,2,3-triol" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-06-21 _chem_comp.pdbx_modified_date 2024-06-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 335.350 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1L2I _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8YIF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1L2I C4C C1 C 0 1 N N N N N N 4.707 17.946 -21.114 -5.401 0.936 1.415 C4C A1L2I 1 A1L2I O4C O1 O 0 1 N N N N N N 3.750 17.821 -22.179 -4.479 0.006 0.842 O4C A1L2I 2 A1L2I C1B C2 C 0 1 N N S N N N 4.223 17.244 -23.368 -4.018 0.373 -0.460 C1B A1L2I 3 A1L2I O2B O2 O 0 1 N N N N N N 3.737 19.324 -24.432 -4.083 -1.952 -1.124 O2B A1L2I 4 A1L2I C2B C3 C 0 1 N N R N N N 3.519 17.920 -24.533 -3.244 -0.796 -1.075 C2B A1L2I 5 A1L2I C4A C4 C 0 1 N N R N N N -0.136 12.808 -26.768 4.114 -0.336 0.068 C4A A1L2I 6 A1L2I C3B C5 C 0 1 N N S N N N 2.031 17.604 -24.490 -2.013 -1.093 -0.213 C3B A1L2I 7 A1L2I O3B O3 O 0 1 N N N N N N 1.400 18.174 -25.628 -1.245 -2.135 -0.819 O3B A1L2I 8 A1L2I C4B C6 C 0 1 N N S N N N 1.812 16.091 -24.453 -1.162 0.175 -0.104 C4B A1L2I 9 A1L2I N4B N1 N 0 1 N N N N N N 0.387 15.733 -24.304 -0.017 -0.077 0.782 N4B A1L2I 10 A1L2I C5B C7 C 0 1 N N R N N N 2.587 15.487 -23.279 -2.016 1.306 0.474 C5B A1L2I 11 A1L2I O5B O4 O 0 1 N N N N N N 3.978 15.853 -23.363 -3.160 1.510 -0.359 O5B A1L2I 12 A1L2I C6B C8 C 0 1 N N N N N N 2.556 13.975 -23.261 -1.190 2.592 0.530 C6B A1L2I 13 A1L2I C1A C9 C 0 1 N N S N N N -0.399 15.490 -25.544 1.146 -0.548 0.019 C1A A1L2I 14 A1L2I C2A C10 C 0 1 N N S N N N -1.446 14.375 -25.360 2.037 -1.400 0.926 C2A A1L2I 15 A1L2I O2A O5 O 0 1 N N N N N N -2.244 14.571 -24.196 2.291 -0.699 2.145 O2A A1L2I 16 A1L2I C3A C11 C 0 1 N N S N N N -0.646 13.075 -25.352 3.361 -1.662 0.197 C3A A1L2I 17 A1L2I O3A O6 O 0 1 N N N N N N -1.429 11.979 -24.899 3.097 -2.192 -1.104 O3A A1L2I 18 A1L2I O4A O7 O 0 1 N N N N N N 0.743 11.690 -26.808 4.585 0.068 1.356 O4A A1L2I 19 A1L2I C5A C12 C 0 1 N N N N N N 0.473 14.047 -27.397 3.204 0.724 -0.481 C5A A1L2I 20 A1L2I C7A C13 C 0 1 N N N N N N 0.450 15.209 -26.757 1.913 0.633 -0.498 C7A A1L2I 21 A1L2I C6A C14 C 0 1 N N N N N N 0.844 13.919 -28.850 3.833 1.971 -1.046 C6A A1L2I 22 A1L2I O6A O8 O 0 1 N N N N N N -0.290 13.953 -29.703 2.809 2.851 -1.514 O6A A1L2I 23 A1L2I H1 H1 H 0 1 N N N N N N 4.225 18.408 -20.240 -6.279 1.019 0.774 H1 A1L2I 24 A1L2I H2 H2 H 0 1 N N N N N N 5.083 16.949 -20.841 -5.703 0.586 2.402 H2 A1L2I 25 A1L2I H3 H3 H 0 1 N N N N N N 5.545 18.576 -21.446 -4.924 1.911 1.506 H3 A1L2I 26 A1L2I H4 H4 H 0 1 N N N N N N 5.303 17.428 -23.466 -4.872 0.617 -1.093 H4 A1L2I 27 A1L2I H5 H5 H 0 1 N N N N N N 4.670 19.503 -24.460 -4.883 -1.835 -1.655 H5 A1L2I 28 A1L2I H6 H6 H 0 1 N N N N N N 3.938 17.536 -25.475 -2.927 -0.532 -2.084 H6 A1L2I 29 A1L2I H7 H7 H 0 1 N N N N N N -1.020 12.556 -27.372 4.963 -0.467 -0.603 H7 A1L2I 30 A1L2I H8 H8 H 0 1 N N N N N N 1.609 18.038 -23.572 -2.332 -1.405 0.782 H8 A1L2I 31 A1L2I H9 H9 H 0 1 N N N N N N 0.470 17.979 -25.606 -1.726 -2.967 -0.926 H9 A1L2I 32 A1L2I H10 H10 H 0 1 N N N N N N 2.199 15.658 -25.387 -0.801 0.458 -1.093 H10 A1L2I 33 A1L2I H11 H11 H 0 1 N N N N N N -0.058 16.480 -23.810 -0.261 -0.732 1.510 H11 A1L2I 34 A1L2I H13 H13 H 0 1 N N N N N N 2.156 15.864 -22.340 -2.342 1.039 1.479 H13 A1L2I 35 A1L2I H14 H14 H 0 1 N N N N N N 3.128 13.606 -22.397 -0.932 2.903 -0.482 H14 A1L2I 36 A1L2I H15 H15 H 0 1 N N N N N N 1.514 13.631 -23.184 -1.771 3.377 1.014 H15 A1L2I 37 A1L2I H16 H16 H 0 1 N N N N N N 3.003 13.588 -24.189 -0.277 2.413 1.099 H16 A1L2I 38 A1L2I H17 H17 H 0 1 N N N N N N -0.960 16.412 -25.755 0.805 -1.151 -0.823 H17 A1L2I 39 A1L2I H18 H18 H 0 1 N N N N N N -2.093 14.371 -26.249 1.543 -2.347 1.140 H18 A1L2I 40 A1L2I H19 H19 H 0 1 N N N N N N -2.874 13.864 -24.121 2.851 -1.182 2.767 H19 A1L2I 41 A1L2I H20 H20 H 0 1 N N N N N N 0.223 13.208 -24.691 3.960 -2.370 0.769 H20 A1L2I 42 A1L2I H21 H21 H 0 1 N N N N N N -1.741 12.154 -24.019 3.891 -2.367 -1.626 H21 A1L2I 43 A1L2I H22 H22 H 0 1 N N N N N N 0.321 10.940 -26.405 5.073 0.902 1.352 H22 A1L2I 44 A1L2I H24 H24 H 0 1 N N N N N N 1.080 16.004 -27.129 1.354 1.460 -0.911 H24 A1L2I 45 A1L2I H26 H26 H 0 1 N N N N N N 1.369 12.964 -28.998 4.413 2.470 -0.270 H26 A1L2I 46 A1L2I H27 H27 H 0 1 N N N N N N 1.513 14.750 -29.118 4.489 1.704 -1.875 H27 A1L2I 47 A1L2I H28 H28 H 0 1 N N N N N N -0.010 13.869 -30.607 3.142 3.676 -1.893 H28 A1L2I 48 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1L2I O6A C6A SING N N 1 A1L2I C6A C5A SING N N 2 A1L2I C5A C4A SING N N 3 A1L2I C5A C7A DOUB N N 4 A1L2I O4A C4A SING N N 5 A1L2I C4A C3A SING N N 6 A1L2I C7A C1A SING N N 7 A1L2I O3B C3B SING N N 8 A1L2I C1A C2A SING N N 9 A1L2I C1A N4B SING N N 10 A1L2I C2A C3A SING N N 11 A1L2I C2A O2A SING N N 12 A1L2I C3A O3A SING N N 13 A1L2I C2B C3B SING N N 14 A1L2I C2B O2B SING N N 15 A1L2I C2B C1B SING N N 16 A1L2I C3B C4B SING N N 17 A1L2I C4B N4B SING N N 18 A1L2I C4B C5B SING N N 19 A1L2I C1B O5B SING N N 20 A1L2I C1B O4C SING N N 21 A1L2I O5B C5B SING N N 22 A1L2I C5B C6B SING N N 23 A1L2I O4C C4C SING N N 24 A1L2I C4C H1 SING N N 25 A1L2I C4C H2 SING N N 26 A1L2I C4C H3 SING N N 27 A1L2I C1B H4 SING N N 28 A1L2I O2B H5 SING N N 29 A1L2I C2B H6 SING N N 30 A1L2I C4A H7 SING N N 31 A1L2I C3B H8 SING N N 32 A1L2I O3B H9 SING N N 33 A1L2I C4B H10 SING N N 34 A1L2I N4B H11 SING N N 35 A1L2I C5B H13 SING N N 36 A1L2I C6B H14 SING N N 37 A1L2I C6B H15 SING N N 38 A1L2I C6B H16 SING N N 39 A1L2I C1A H17 SING N N 40 A1L2I C2A H18 SING N N 41 A1L2I O2A H19 SING N N 42 A1L2I C3A H20 SING N N 43 A1L2I O3A H21 SING N N 44 A1L2I O4A H22 SING N N 45 A1L2I C7A H24 SING N N 46 A1L2I C6A H26 SING N N 47 A1L2I C6A H27 SING N N 48 A1L2I O6A H28 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1L2I InChI InChI 1.06 "InChI=1S/C14H25NO8/c1-5-8(11(19)13(21)14(22-2)23-5)15-7-3-6(4-16)9(17)12(20)10(7)18/h3,5,7-21H,4H2,1-2H3/t5-,7+,8-,9-,10+,11+,12+,13-,14+/m1/s1" A1L2I InChIKey InChI 1.06 KFHKERRGDZTZQJ-SHCNSHNESA-N A1L2I SMILES_CANONICAL CACTVS 3.385 "CO[C@H]1O[C@H](C)[C@@H](N[C@H]2C=C(CO)[C@@H](O)[C@H](O)[C@H]2O)[C@H](O)[C@H]1O" A1L2I SMILES CACTVS 3.385 "CO[CH]1O[CH](C)[CH](N[CH]2C=C(CO)[CH](O)[CH](O)[CH]2O)[CH](O)[CH]1O" A1L2I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)OC)O)O)N[C@H]2C=C([C@H]([C@@H]([C@H]2O)O)O)CO" A1L2I SMILES "OpenEye OEToolkits" 2.0.7 "CC1C(C(C(C(O1)OC)O)O)NC2C=C(C(C(C2O)O)O)CO" # _pdbx_chem_comp_identifier.comp_id A1L2I _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(1~{S},2~{S},3~{R},6~{S})-4-(hydroxymethyl)-6-[[(2~{R},3~{S},4~{S},5~{R},6~{S})-6-methoxy-2-methyl-4,5-bis(oxidanyl)oxan-3-yl]amino]cyclohex-4-ene-1,2,3-triol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1L2I "Create component" 2024-06-21 PDBJ A1L2I "Initial release" 2024-07-03 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1L2I _pdbx_chem_comp_synonyms.name "(1~{S},2~{S},3~{R},6~{S})-4-(hydroxymethyl)-6-[[(2~{R},3~{S},4~{S},5~{R},6~{S})-6-methoxy-2-methyl-4,5-bis(oxidanyl)oxan-3-yl]amino]cyclohex-4-ene-1,2,3-triol" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? #