data_A1L3M # _chem_comp.id A1L3M _chem_comp.name "~{N}-[(1~{S})-4-azanyl-4-oxidanylidene-1-phenyl-butyl]-5-[4-(trifluoromethyl)phenyl]-3,4-dihydro-1~{H}-isoquinoline-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H26 F3 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-07 _chem_comp.pdbx_modified_date 2025-04-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 481.509 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1L3M _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9IXT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1L3M C10 C1 C 0 1 Y N N N N N 12.765 -10.016 -5.407 -3.912 2.054 0.289 C10 A1L3M 1 A1L3M C12 C2 C 0 1 Y N N N N N 14.906 -8.949 -5.688 -2.965 2.928 2.307 C12 A1L3M 2 A1L3M C17 C3 C 0 1 N N N N N N 9.134 -12.414 -2.648 -1.276 -2.087 -0.180 C17 A1L3M 3 A1L3M C02 C4 C 0 1 N N N N N N 11.282 -12.324 -3.888 -2.180 -0.090 -1.283 C02 A1L3M 4 A1L3M C04 C5 C 0 1 N N S N N N 11.620 -10.901 -5.916 -4.300 0.877 -0.567 C04 A1L3M 5 A1L3M C05 C6 C 0 1 N N N N N N 10.726 -10.154 -6.899 -5.630 0.303 -0.074 C05 A1L3M 6 A1L3M C06 C7 C 0 1 N N N N N N 9.975 -8.996 -6.233 -6.085 -0.812 -1.018 C06 A1L3M 7 A1L3M C07 C8 C 0 1 N N N N N N 8.504 -9.281 -5.918 -7.395 -1.378 -0.532 C07 A1L3M 8 A1L3M C11 C9 C 0 1 Y N N N N N 13.888 -9.753 -6.190 -3.321 1.848 1.522 C11 A1L3M 9 A1L3M C13 C10 C 0 1 Y N N N N N 14.799 -8.421 -4.408 -3.202 4.215 1.861 C13 A1L3M 10 A1L3M C14 C11 C 0 1 Y N N N N N 13.682 -8.690 -3.635 -3.788 4.422 0.627 C14 A1L3M 11 A1L3M C15 C12 C 0 1 Y N N N N N 12.671 -9.485 -4.133 -4.144 3.341 -0.159 C15 A1L3M 12 A1L3M C18 C13 C 0 1 Y N N N N N 8.347 -13.202 -1.621 0.016 -2.215 0.588 C18 A1L3M 13 A1L3M C19 C14 C 0 1 Y N N N N N 7.108 -12.671 -1.216 0.028 -3.048 1.699 C19 A1L3M 14 A1L3M C20 C15 C 0 1 Y N N N N N 6.338 -13.340 -0.285 1.180 -3.219 2.441 C20 A1L3M 15 A1L3M C21 C16 C 0 1 Y N N N N N 6.798 -14.547 0.250 2.335 -2.557 2.078 C21 A1L3M 16 A1L3M C22 C17 C 0 1 Y N N N N N 8.014 -15.070 -0.154 2.329 -1.718 0.969 C22 A1L3M 17 A1L3M C23 C18 C 0 1 Y N N N N N 8.472 -16.377 0.477 3.569 -1.005 0.576 C23 A1L3M 18 A1L3M C24 C19 C 0 1 Y N N N N N 8.551 -17.570 -0.217 3.573 0.384 0.467 C24 A1L3M 19 A1L3M C25 C20 C 0 1 Y N N N N N 8.962 -18.710 0.474 4.730 1.042 0.100 C25 A1L3M 20 A1L3M C26 C21 C 0 1 Y N N N N N 9.268 -18.660 1.836 5.884 0.325 -0.158 C26 A1L3M 21 A1L3M C27 C22 C 0 1 N N N N N N 9.722 -19.893 2.627 7.144 1.049 -0.558 C27 A1L3M 22 A1L3M C31 C23 C 0 1 Y N N N N N 9.181 -17.462 2.504 5.886 -1.054 -0.051 C31 A1L3M 23 A1L3M C32 C24 C 0 1 Y N N N N N 8.789 -16.332 1.822 4.737 -1.722 0.320 C32 A1L3M 24 A1L3M C33 C25 C 0 1 Y N N N N N 8.781 -14.389 -1.105 1.158 -1.543 0.222 C33 A1L3M 25 A1L3M C34 C26 C 0 1 N N N N N N 10.142 -14.992 -1.522 1.212 -0.600 -0.951 C34 A1L3M 26 A1L3M C35 C27 C 0 1 N N N N N N 11.029 -13.785 -1.881 0.063 -0.870 -1.920 C35 A1L3M 27 A1L3M F28 F1 F 0 1 N N N N N N 9.056 -19.952 3.808 7.879 1.371 0.588 F28 A1L3M 28 A1L3M F29 F2 F 0 1 N N N N N N 9.499 -21.057 1.945 7.912 0.225 -1.388 F29 A1L3M 29 A1L3M F30 F3 F 0 1 N N N N N N 11.041 -19.772 2.929 6.811 2.221 -1.243 F30 A1L3M 30 A1L3M N03 N1 N 0 1 N N N N N N 10.764 -11.360 -4.823 -3.261 -0.153 -0.480 N03 A1L3M 31 A1L3M N08 N2 N 0 1 N N N N N N 7.480 -8.692 -6.745 -7.990 -2.378 -1.211 N08 A1L3M 32 A1L3M N16 N3 N 0 1 N N N N N N 10.466 -12.827 -2.810 -1.177 -0.977 -1.133 N16 A1L3M 33 A1L3M O01 O1 O 0 1 N N N N N N 12.401 -12.691 -4.012 -2.111 0.768 -2.142 O01 A1L3M 34 A1L3M O09 O2 O 0 1 N N N N N N 8.174 -9.952 -4.990 -7.913 -0.933 0.470 O09 A1L3M 35 A1L3M H121 H1 H 0 0 N N N N N N 15.776 -8.736 -6.291 -2.503 2.767 3.270 H121 A1L3M 36 A1L3M H172 H2 H 0 0 N N N N N N 9.138 -11.358 -2.340 -1.470 -3.013 -0.721 H172 A1L3M 37 A1L3M H171 H3 H 0 0 N N N N N N 8.625 -12.511 -3.618 -2.093 -1.896 0.515 H171 A1L3M 38 A1L3M H041 H4 H 0 0 N N N N N N 12.055 -11.771 -6.430 -4.405 1.200 -1.603 H041 A1L3M 39 A1L3M H052 H5 H 0 0 N N N N N N 9.992 -10.859 -7.316 -5.501 -0.101 0.930 H052 A1L3M 40 A1L3M H051 H6 H 0 0 N N N N N N 11.350 -9.751 -7.710 -6.381 1.092 -0.055 H051 A1L3M 41 A1L3M H061 H7 H 0 0 N N N N N N 10.486 -8.754 -5.290 -6.214 -0.409 -2.022 H061 A1L3M 42 A1L3M H062 H8 H 0 0 N N N N N N 10.019 -8.128 -6.907 -5.333 -1.602 -1.037 H062 A1L3M 43 A1L3M H111 H9 H 0 0 N N N N N N 13.967 -10.172 -7.182 -3.136 0.842 1.870 H111 A1L3M 44 A1L3M H131 H10 H 0 0 N N N N N N 15.589 -7.799 -4.014 -2.924 5.059 2.475 H131 A1L3M 45 A1L3M H141 H11 H 0 0 N N N N N N 13.602 -8.277 -2.640 -3.973 5.427 0.278 H141 A1L3M 46 A1L3M H151 H12 H 0 0 N N N N N N 11.802 -9.694 -3.526 -4.602 3.503 -1.124 H151 A1L3M 47 A1L3M H191 H13 H 0 0 N N N N N N 6.759 -11.738 -1.634 -0.874 -3.569 1.986 H191 A1L3M 48 A1L3M H201 H14 H 0 0 N N N N N N 5.387 -12.934 0.028 1.176 -3.868 3.304 H201 A1L3M 49 A1L3M H211 H15 H 0 0 N N N N N N 6.202 -15.073 0.981 3.240 -2.689 2.653 H211 A1L3M 50 A1L3M H241 H16 H 0 0 N N N N N N 8.301 -17.618 -1.267 2.672 0.945 0.668 H241 A1L3M 51 A1L3M H251 H17 H 0 0 N N N N N N 9.045 -19.649 -0.054 4.734 2.118 0.015 H251 A1L3M 52 A1L3M H311 H18 H 0 0 N N N N N N 9.418 -17.407 3.556 6.790 -1.610 -0.255 H311 A1L3M 53 A1L3M H321 H19 H 0 0 N N N N N N 8.728 -15.391 2.349 4.740 -2.799 0.407 H321 A1L3M 54 A1L3M H341 H20 H 0 0 N N N N N N 10.583 -15.560 -0.690 1.142 0.426 -0.589 H341 A1L3M 55 A1L3M H342 H21 H 0 0 N N N N N N 10.020 -15.653 -2.393 2.160 -0.732 -1.473 H342 A1L3M 56 A1L3M H352 H22 H 0 0 N N N N N N 11.261 -13.250 -0.948 -0.021 -0.048 -2.631 H352 A1L3M 57 A1L3M H351 H23 H 0 0 N N N N N N 11.959 -14.172 -2.322 0.243 -1.803 -2.454 H351 A1L3M 58 A1L3M H031 H24 H 0 0 N N N N N N 9.832 -11.009 -4.727 -3.352 -0.881 0.155 H031 A1L3M 59 A1L3M H082 H25 H 0 0 N N N N N N 6.515 -8.850 -6.535 -7.576 -2.734 -2.013 H082 A1L3M 60 A1L3M H081 H26 H 0 0 N N N N N N 7.735 -8.125 -7.529 -8.833 -2.742 -0.898 H081 A1L3M 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1L3M C02 O01 DOUB N N 1 A1L3M C04 N03 SING N N 2 A1L3M C06 C05 SING N N 3 A1L3M C07 C06 SING N N 4 A1L3M N08 C07 SING N N 5 A1L3M O09 C07 DOUB N N 6 A1L3M C05 C04 SING N N 7 A1L3M C10 C04 SING N N 8 A1L3M C11 C10 DOUB Y N 9 A1L3M C12 C11 SING Y N 10 A1L3M C13 C12 DOUB Y N 11 A1L3M C14 C13 SING Y N 12 A1L3M C15 C14 DOUB Y N 13 A1L3M N03 C02 SING N N 14 A1L3M N16 C02 SING N N 15 A1L3M C17 N16 SING N N 16 A1L3M C18 C17 SING N N 17 A1L3M C19 C18 DOUB Y N 18 A1L3M C20 C19 SING Y N 19 A1L3M C21 C20 DOUB Y N 20 A1L3M C22 C21 SING Y N 21 A1L3M C24 C23 DOUB Y N 22 A1L3M C25 C24 SING Y N 23 A1L3M C26 C25 DOUB Y N 24 A1L3M F28 C27 SING N N 25 A1L3M F29 C27 SING N N 26 A1L3M F30 C27 SING N N 27 A1L3M C27 C26 SING N N 28 A1L3M C31 C26 SING Y N 29 A1L3M C32 C31 DOUB Y N 30 A1L3M C23 C22 SING N N 31 A1L3M C33 C22 DOUB Y N 32 A1L3M C34 C33 SING N N 33 A1L3M C35 C34 SING N N 34 A1L3M C10 C15 SING Y N 35 A1L3M N16 C35 SING N N 36 A1L3M C18 C33 SING Y N 37 A1L3M C23 C32 SING Y N 38 A1L3M C12 H121 SING N N 39 A1L3M C17 H172 SING N N 40 A1L3M C17 H171 SING N N 41 A1L3M C04 H041 SING N N 42 A1L3M C05 H052 SING N N 43 A1L3M C05 H051 SING N N 44 A1L3M C06 H061 SING N N 45 A1L3M C06 H062 SING N N 46 A1L3M C11 H111 SING N N 47 A1L3M C13 H131 SING N N 48 A1L3M C14 H141 SING N N 49 A1L3M C15 H151 SING N N 50 A1L3M C19 H191 SING N N 51 A1L3M C20 H201 SING N N 52 A1L3M C21 H211 SING N N 53 A1L3M C24 H241 SING N N 54 A1L3M C25 H251 SING N N 55 A1L3M C31 H311 SING N N 56 A1L3M C32 H321 SING N N 57 A1L3M C34 H341 SING N N 58 A1L3M C34 H342 SING N N 59 A1L3M C35 H352 SING N N 60 A1L3M C35 H351 SING N N 61 A1L3M N03 H031 SING N N 62 A1L3M N08 H082 SING N N 63 A1L3M N08 H081 SING N N 64 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1L3M InChI InChI 1.06 "InChI=1S/C27H26F3N3O2/c28-27(29,30)21-11-9-18(10-12-21)22-8-4-7-20-17-33(16-15-23(20)22)26(35)32-24(13-14-25(31)34)19-5-2-1-3-6-19/h1-12,24H,13-17H2,(H2,31,34)(H,32,35)/t24-/m1/s1" A1L3M InChIKey InChI 1.06 HWEZEMYRSACYJY-XMMPIXPASA-N A1L3M SMILES_CANONICAL CACTVS 3.385 "NC(=O)CC[C@H](NC(=O)N1CCc2c(C1)cccc2c3ccc(cc3)C(F)(F)F)c4ccccc4" A1L3M SMILES CACTVS 3.385 "NC(=O)CC[CH](NC(=O)N1CCc2c(C1)cccc2c3ccc(cc3)C(F)(F)F)c4ccccc4" A1L3M SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)[C@H](CCC(=O)N)NC(=O)N2CCc3c(cccc3c4ccc(cc4)C(F)(F)F)C2" A1L3M SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C(CCC(=O)N)NC(=O)N2CCc3c(cccc3c4ccc(cc4)C(F)(F)F)C2" # _pdbx_chem_comp_identifier.comp_id A1L3M _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(1~{S})-4-azanyl-4-oxidanylidene-1-phenyl-butyl]-5-[4-(trifluoromethyl)phenyl]-3,4-dihydro-1~{H}-isoquinoline-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1L3M "Create component" 2024-08-07 PDBJ A1L3M "Initial release" 2025-04-16 RCSB #