data_A1L3V # _chem_comp.id A1L3V _chem_comp.name "(7~{S},9~{S})-7-[(2~{R},4~{S},5~{S},6~{S})-4-azanyl-6-methyl-5-oxidanyl-oxan-2-yl]oxy-9-ethyl-4-methoxy-6,9,11-tris(oxidanyl)-8,10-dihydro-7~{H}-tetracene-5,12-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H31 N O9" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-21 _chem_comp.pdbx_modified_date 2024-11-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 513.536 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1L3V _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9J56 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1L3V O01 O1 O 0 1 N N N N N N 44.341 36.483 106.020 -3.851 -2.703 1.180 O01 A1L3V 1 A1L3V C02 C1 C 0 1 N N N N N N 44.686 37.185 106.850 -3.629 -1.637 0.639 C02 A1L3V 2 A1L3V C03 C2 C 0 1 Y N N N N N 45.427 36.667 108.042 -2.265 -1.292 0.199 C03 A1L3V 3 A1L3V C04 C3 C 0 1 Y N N N N N 45.833 37.488 109.012 -1.958 0.040 -0.150 C04 A1L3V 4 A1L3V C05 C4 C 0 1 Y N N N N N 46.509 37.022 110.129 -0.668 0.359 -0.562 C05 A1L3V 5 A1L3V O06 O2 O 0 1 N N N N N N 46.896 37.885 111.129 -0.365 1.638 -0.895 O06 A1L3V 6 A1L3V C07 C5 C 0 1 Y N N N N N 46.765 35.668 110.236 0.321 -0.632 -0.635 C07 A1L3V 7 A1L3V C08 C6 C 0 1 N N S N N N 47.519 35.183 111.471 1.695 -0.206 -1.084 C08 A1L3V 8 A1L3V O09 O3 O 0 1 N N N N N N 46.731 35.336 112.655 2.362 0.448 -0.002 O09 A1L3V 9 A1L3V C10 C7 C 0 1 N N R N N N 47.421 35.931 113.698 2.850 1.752 -0.323 C10 A1L3V 10 A1L3V O11 O4 O 0 1 N N N N N N 47.074 35.342 115.025 3.991 1.637 -1.177 O11 A1L3V 11 A1L3V C12 C8 C 0 1 N N S N N N 45.750 35.727 115.483 5.069 0.889 -0.612 C12 A1L3V 12 A1L3V C13 C9 C 0 1 N N N N N N 45.616 35.290 116.905 6.217 0.809 -1.620 C13 A1L3V 13 A1L3V C14 C10 C 0 1 N N S N N N 45.391 37.233 115.324 5.556 1.582 0.663 C14 A1L3V 14 A1L3V O15 O5 O 0 1 N N N N N N 44.818 37.908 116.482 6.056 2.881 0.340 O15 A1L3V 15 A1L3V C16 C11 C 0 1 N N S N N N 46.494 38.086 114.804 4.386 1.712 1.643 C16 A1L3V 16 A1L3V N17 N1 N 0 1 N N N N N N 47.283 38.659 115.977 4.826 2.443 2.839 N17 A1L3V 17 A1L3V C18 C12 C 0 1 N N N N N N 47.309 37.441 113.762 3.248 2.480 0.964 C18 A1L3V 18 A1L3V C19 C13 C 0 1 N N N N N N 48.061 33.793 111.243 2.517 -1.415 -1.524 C19 A1L3V 19 A1L3V C20 C14 C 0 1 N N S N N N 47.200 32.825 110.455 2.456 -2.470 -0.412 C20 A1L3V 20 A1L3V C21 C15 C 0 1 N N N N N N 47.961 31.575 110.049 3.453 -3.591 -0.710 C21 A1L3V 21 A1L3V C22 C16 C 0 1 N N N N N N 48.661 31.808 108.716 3.301 -4.700 0.334 C22 A1L3V 22 A1L3V O23 O6 O 0 1 N N N N N N 46.128 32.500 111.265 2.773 -1.864 0.843 O23 A1L3V 23 A1L3V C24 C17 C 0 1 N N N N N N 46.570 33.355 109.159 1.039 -3.038 -0.366 C24 A1L3V 24 A1L3V C25 C18 C 0 1 Y N N N N N 46.356 34.861 109.228 0.022 -1.928 -0.300 C25 A1L3V 25 A1L3V C26 C19 C 0 1 Y N N N N N 45.688 35.333 108.125 -1.272 -2.266 0.120 C26 A1L3V 26 A1L3V O27 O7 O 0 1 N N N N N N 45.289 34.479 107.134 -1.559 -3.548 0.454 O27 A1L3V 27 A1L3V C28 C20 C 0 1 N N N N N N 45.551 38.950 108.924 -3.007 1.074 -0.075 C28 A1L3V 28 A1L3V C29 C21 C 0 1 Y N N N N N 44.801 39.498 107.715 -4.417 0.661 0.065 C29 A1L3V 29 A1L3V C30 C22 C 0 1 Y N N N N N 44.517 40.849 107.592 -5.450 1.577 -0.147 C30 A1L3V 30 A1L3V O31 O8 O 0 1 N N N N N N 44.919 41.706 108.565 -5.167 2.859 -0.485 O31 A1L3V 31 A1L3V C32 C23 C 0 1 N N N N N N 44.367 42.966 108.494 -6.276 3.737 -0.685 C32 A1L3V 32 A1L3V C33 C24 C 0 1 Y N N N N N 43.849 41.327 106.501 -6.773 1.165 -0.010 C33 A1L3V 33 A1L3V C34 C25 C 0 1 Y N N N N N 43.442 40.453 105.522 -7.067 -0.139 0.334 C34 A1L3V 34 A1L3V C35 C26 C 0 1 Y N N N N N 43.727 39.115 105.636 -6.051 -1.057 0.547 C35 A1L3V 35 A1L3V C36 C27 C 0 1 Y N N N N N 44.405 38.659 106.748 -4.725 -0.670 0.409 C36 A1L3V 36 A1L3V O37 O9 O 0 1 N N N N N N 45.920 39.602 109.794 -2.713 2.253 -0.126 O37 A1L3V 37 A1L3V H1 H1 H 0 1 N N N N N N 46.635 38.770 110.903 -0.094 2.187 -0.146 H1 A1L3V 38 A1L3V H2 H2 H 0 1 N N N N N N 48.393 35.843 111.574 1.601 0.488 -1.919 H2 A1L3V 39 A1L3V H3 H3 H 0 1 N N N N N N 48.489 35.719 113.544 2.069 2.317 -0.833 H3 A1L3V 40 A1L3V H4 H4 H 0 1 N N N N N N 45.011 35.163 114.895 4.726 -0.117 -0.371 H4 A1L3V 41 A1L3V H5 H5 H 0 1 N N N N N N 44.621 35.568 117.282 6.560 1.815 -1.860 H5 A1L3V 42 A1L3V H6 H6 H 0 1 N N N N N N 45.740 34.199 116.966 7.040 0.238 -1.189 H6 A1L3V 43 A1L3V H7 H7 H 0 1 N N N N N N 46.389 35.781 117.514 5.870 0.316 -2.528 H7 A1L3V 44 A1L3V H8 H8 H 0 1 N N N N N N 44.612 37.255 114.548 6.350 0.989 1.119 H8 A1L3V 45 A1L3V H9 H9 H 0 1 N N N N N N 44.109 37.384 116.836 6.796 2.874 -0.282 H9 A1L3V 46 A1L3V H10 H10 H 0 1 N N N N N N 46.009 38.949 114.324 4.038 0.720 1.930 H10 A1L3V 47 A1L3V H11 H11 H 0 1 N N N N N N 46.652 39.075 116.632 4.071 2.541 3.501 H11 A1L3V 48 A1L3V H12 H12 H 0 1 N N N N N N 47.793 37.925 116.426 5.623 1.994 3.265 H12 A1L3V 49 A1L3V H14 H14 H 0 1 N N N N N N 48.332 37.828 113.877 3.582 3.489 0.723 H14 A1L3V 50 A1L3V H15 H15 H 0 1 N N N N N N 46.900 37.768 112.795 2.391 2.529 1.634 H15 A1L3V 51 A1L3V H16 H16 H 0 1 N N N N N N 48.242 33.344 112.231 2.101 -1.827 -2.444 H16 A1L3V 52 A1L3V H17 H17 H 0 1 N N N N N N 49.016 33.896 110.707 3.552 -1.116 -1.691 H17 A1L3V 53 A1L3V H18 H18 H 0 1 N N N N N N 47.258 30.735 109.950 3.257 -3.998 -1.702 H18 A1L3V 54 A1L3V H19 H19 H 0 1 N N N N N N 48.710 31.337 110.818 4.468 -3.195 -0.673 H19 A1L3V 55 A1L3V H20 H20 H 0 1 N N N N N N 49.211 30.900 108.426 4.011 -5.499 0.122 H20 A1L3V 56 A1L3V H21 H21 H 0 1 N N N N N N 47.913 32.045 107.945 3.497 -4.293 1.326 H21 A1L3V 57 A1L3V H22 H22 H 0 1 N N N N N N 49.365 32.647 108.814 2.286 -5.096 0.298 H22 A1L3V 58 A1L3V H23 H23 H 0 1 N N N N N N 46.447 32.162 112.093 2.753 -2.477 1.591 H23 A1L3V 59 A1L3V H24 H24 H 0 1 N N N N N N 45.599 32.861 109.004 0.863 -3.635 -1.261 H24 A1L3V 60 A1L3V H25 H25 H 0 1 N N N N N N 47.237 33.125 108.315 0.936 -3.672 0.514 H25 A1L3V 61 A1L3V H26 H26 H 0 1 N N N N N N 44.836 34.968 106.457 -1.872 -4.087 -0.287 H26 A1L3V 62 A1L3V H27 H27 H 0 1 N N N N N N 44.752 43.583 109.320 -5.911 4.730 -0.950 H27 A1L3V 63 A1L3V H28 H28 H 0 1 N N N N N N 44.636 43.430 107.534 -6.902 3.354 -1.491 H28 A1L3V 64 A1L3V H29 H29 H 0 1 N N N N N N 43.272 42.891 108.572 -6.861 3.799 0.232 H29 A1L3V 65 A1L3V H30 H30 H 0 1 N N N N N N 43.642 42.383 106.408 -7.574 1.871 -0.173 H30 A1L3V 66 A1L3V H31 H31 H 0 1 N N N N N N 42.898 40.818 104.663 -8.097 -0.445 0.442 H31 A1L3V 67 A1L3V H32 H32 H 0 1 N N N N N N 43.423 38.425 104.862 -6.291 -2.076 0.816 H32 A1L3V 68 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1L3V C34 C35 DOUB Y N 1 A1L3V C34 C33 SING Y N 2 A1L3V C35 C36 SING Y N 3 A1L3V O01 C02 DOUB N N 4 A1L3V C33 C30 DOUB Y N 5 A1L3V C36 C02 SING N N 6 A1L3V C36 C29 DOUB Y N 7 A1L3V C02 C03 SING N N 8 A1L3V O27 C26 SING N N 9 A1L3V C30 C29 SING Y N 10 A1L3V C30 O31 SING N N 11 A1L3V C29 C28 SING N N 12 A1L3V C03 C26 DOUB Y N 13 A1L3V C03 C04 SING Y N 14 A1L3V C26 C25 SING Y N 15 A1L3V C32 O31 SING N N 16 A1L3V C22 C21 SING N N 17 A1L3V C28 C04 SING N N 18 A1L3V C28 O37 DOUB N N 19 A1L3V C04 C05 DOUB Y N 20 A1L3V C24 C25 SING N N 21 A1L3V C24 C20 SING N N 22 A1L3V C25 C07 DOUB Y N 23 A1L3V C21 C20 SING N N 24 A1L3V C05 C07 SING Y N 25 A1L3V C05 O06 SING N N 26 A1L3V C07 C08 SING N N 27 A1L3V C20 C19 SING N N 28 A1L3V C20 O23 SING N N 29 A1L3V C19 C08 SING N N 30 A1L3V C08 O09 SING N N 31 A1L3V O09 C10 SING N N 32 A1L3V C10 C18 SING N N 33 A1L3V C10 O11 SING N N 34 A1L3V C18 C16 SING N N 35 A1L3V C16 C14 SING N N 36 A1L3V C16 N17 SING N N 37 A1L3V O11 C12 SING N N 38 A1L3V C14 C12 SING N N 39 A1L3V C14 O15 SING N N 40 A1L3V C12 C13 SING N N 41 A1L3V O06 H1 SING N N 42 A1L3V C08 H2 SING N N 43 A1L3V C10 H3 SING N N 44 A1L3V C12 H4 SING N N 45 A1L3V C13 H5 SING N N 46 A1L3V C13 H6 SING N N 47 A1L3V C13 H7 SING N N 48 A1L3V C14 H8 SING N N 49 A1L3V O15 H9 SING N N 50 A1L3V C16 H10 SING N N 51 A1L3V N17 H11 SING N N 52 A1L3V N17 H12 SING N N 53 A1L3V C18 H14 SING N N 54 A1L3V C18 H15 SING N N 55 A1L3V C19 H16 SING N N 56 A1L3V C19 H17 SING N N 57 A1L3V C21 H18 SING N N 58 A1L3V C21 H19 SING N N 59 A1L3V C22 H20 SING N N 60 A1L3V C22 H21 SING N N 61 A1L3V C22 H22 SING N N 62 A1L3V O23 H23 SING N N 63 A1L3V C24 H24 SING N N 64 A1L3V C24 H25 SING N N 65 A1L3V O27 H26 SING N N 66 A1L3V C32 H27 SING N N 67 A1L3V C32 H28 SING N N 68 A1L3V C32 H29 SING N N 69 A1L3V C33 H30 SING N N 70 A1L3V C34 H31 SING N N 71 A1L3V C35 H32 SING N N 72 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1L3V InChI InChI 1.06 "InChI=1S/C27H31NO9/c1-4-27(34)9-13-19(16(10-27)37-17-8-14(28)22(29)11(2)36-17)26(33)21-20(24(13)31)23(30)12-6-5-7-15(35-3)18(12)25(21)32/h5-7,11,14,16-17,22,29,31,33-34H,4,8-10,28H2,1-3H3/t11-,14-,16-,17-,22+,27-/m0/s1" A1L3V InChIKey InChI 1.06 XAMIMZAWZUSOPA-JIGXQNLBSA-N A1L3V SMILES_CANONICAL CACTVS 3.385 "CC[C@@]1(O)C[C@H](O[C@H]2C[C@H](N)[C@H](O)[C@H](C)O2)c3c(O)c4C(=O)c5c(OC)cccc5C(=O)c4c(O)c3C1" A1L3V SMILES CACTVS 3.385 "CC[C]1(O)C[CH](O[CH]2C[CH](N)[CH](O)[CH](C)O2)c3c(O)c4C(=O)c5c(OC)cccc5C(=O)c4c(O)c3C1" A1L3V SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@@]1(Cc2c(c(c3c(c2O)C(=O)c4cccc(c4C3=O)OC)O)[C@H](C1)O[C@H]5C[C@@H]([C@@H]([C@@H](O5)C)O)N)O" A1L3V SMILES "OpenEye OEToolkits" 2.0.7 "CCC1(Cc2c(c(c3c(c2O)C(=O)c4cccc(c4C3=O)OC)O)C(C1)OC5CC(C(C(O5)C)O)N)O" # _pdbx_chem_comp_identifier.comp_id A1L3V _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(7~{S},9~{S})-7-[(2~{R},4~{S},5~{S},6~{S})-4-azanyl-6-methyl-5-oxidanyl-oxan-2-yl]oxy-9-ethyl-4-methoxy-6,9,11-tris(oxidanyl)-8,10-dihydro-7~{H}-tetracene-5,12-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1L3V "Create component" 2024-08-21 PDBJ A1L3V "Initial release" 2024-11-06 RCSB #