data_A1L3Z # _chem_comp.id A1L3Z _chem_comp.name "(2~{S},3~{S},4~{S})-2-[(1~{S})-1,2-bis(oxidanyl)ethyl]pyrrolidine-3,4-diol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H13 N O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-08-22 _chem_comp.pdbx_modified_date 2024-11-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 163.172 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1L3Z _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9J6N _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1L3Z C4 C1 C 0 1 N N N N N N -12.149 16.576 15.017 -1.660 1.397 -0.776 C4 A1L3Z 1 A1L3Z C5 C2 C 0 1 N N S N N N -11.648 15.546 16.028 -2.249 0.162 -0.063 C5 A1L3Z 2 A1L3Z C6 C3 C 0 1 N N S N N N -12.920 14.856 16.550 -1.086 -0.849 0.015 C6 A1L3Z 3 A1L3Z N1 N1 N 0 1 N N N N N N -13.588 16.232 14.796 -0.197 1.310 -0.531 N1 A1L3Z 4 A1L3Z C3 C4 C 0 1 N N S N N N -14.090 15.756 16.151 0.108 -0.138 -0.658 C3 A1L3Z 5 A1L3Z O1 O1 O 0 1 N N N N N N -15.860 15.574 18.489 3.779 0.001 0.120 O1 A1L3Z 6 A1L3Z C1 C5 C 0 1 N N N N N N -15.947 14.646 17.419 2.542 0.396 -0.477 C1 A1L3Z 7 A1L3Z C2 C6 C 0 1 N N S N N N -15.467 15.153 16.068 1.410 -0.475 0.071 C2 A1L3Z 8 A1L3Z O2 O2 O 0 1 N N N N N N -16.400 16.143 15.581 1.251 -0.226 1.469 O2 A1L3Z 9 A1L3Z O3 O3 O 0 1 N N N N N N -10.772 14.585 15.446 -2.691 0.511 1.250 O3 A1L3Z 10 A1L3Z O4 O4 O 0 1 N N N N N N -12.890 14.703 17.962 -1.418 -2.043 -0.696 O4 A1L3Z 11 A1L3Z H1 H1 H 0 1 N N N N N N -11.584 16.501 14.076 -1.869 1.355 -1.845 H1 A1L3Z 12 A1L3Z H2 H2 H 0 1 N N N N N N -12.053 17.594 15.422 -2.065 2.313 -0.347 H2 A1L3Z 13 A1L3Z H3 H3 H 0 1 N N N N N N -11.154 16.067 16.861 -3.073 -0.254 -0.643 H3 A1L3Z 14 A1L3Z H4 H4 H 0 1 N N N N N N -13.029 13.880 16.055 -0.853 -1.079 1.055 H4 A1L3Z 15 A1L3Z H5 H5 H 0 1 N N N N N N -14.100 17.036 14.494 0.317 1.849 -1.211 H5 A1L3Z 16 A1L3Z H7 H7 H 0 1 N N N N N N -14.120 16.616 16.837 0.176 -0.421 -1.709 H7 A1L3Z 17 A1L3Z H8 H8 H 0 1 N N N N N N -16.180 15.169 19.287 4.542 0.512 -0.181 H8 A1L3Z 18 A1L3Z H9 H9 H 0 1 N N N N N N -17.001 14.349 17.314 2.343 1.441 -0.242 H9 A1L3Z 19 A1L3Z H10 H10 H 0 1 N N N N N N -15.343 13.766 17.684 2.605 0.271 -1.558 H10 A1L3Z 20 A1L3Z H11 H11 H 0 1 N N N N N N -15.437 14.304 15.369 1.653 -1.527 -0.085 H11 A1L3Z 21 A1L3Z H12 H12 H 0 1 N N N N N N -17.269 15.762 15.529 1.034 0.692 1.683 H12 A1L3Z 22 A1L3Z H13 H13 H 0 1 N N N N N N -10.489 13.969 16.112 -3.392 1.177 1.265 H13 A1L3Z 23 A1L3Z H14 H14 H 0 1 N N N N N N -13.687 14.275 18.252 -2.189 -2.508 -0.344 H14 A1L3Z 24 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1L3Z N1 C4 SING N N 1 A1L3Z N1 C3 SING N N 2 A1L3Z C4 C5 SING N N 3 A1L3Z O3 C5 SING N N 4 A1L3Z O2 C2 SING N N 5 A1L3Z C5 C6 SING N N 6 A1L3Z C2 C3 SING N N 7 A1L3Z C2 C1 SING N N 8 A1L3Z C3 C6 SING N N 9 A1L3Z C6 O4 SING N N 10 A1L3Z C1 O1 SING N N 11 A1L3Z C4 H1 SING N N 12 A1L3Z C4 H2 SING N N 13 A1L3Z C5 H3 SING N N 14 A1L3Z C6 H4 SING N N 15 A1L3Z N1 H5 SING N N 16 A1L3Z C3 H7 SING N N 17 A1L3Z O1 H8 SING N N 18 A1L3Z C1 H9 SING N N 19 A1L3Z C1 H10 SING N N 20 A1L3Z C2 H11 SING N N 21 A1L3Z O2 H12 SING N N 22 A1L3Z O3 H13 SING N N 23 A1L3Z O4 H14 SING N N 24 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1L3Z InChI InChI 1.06 "InChI=1S/C6H13NO4/c8-2-4(10)5-6(11)3(9)1-7-5/h3-11H,1-2H2/t3-,4+,5-,6+/m0/s1" A1L3Z InChIKey InChI 1.06 RVNSAAIWCWTCTJ-BGPJRJDNSA-N A1L3Z SMILES_CANONICAL CACTVS 3.385 "OC[C@@H](O)[C@@H]1NC[C@H](O)[C@H]1O" A1L3Z SMILES CACTVS 3.385 "OC[CH](O)[CH]1NC[CH](O)[CH]1O" A1L3Z SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1[C@@H]([C@H]([C@@H](N1)[C@@H](CO)O)O)O" A1L3Z SMILES "OpenEye OEToolkits" 2.0.7 "C1C(C(C(N1)C(CO)O)O)O" # _pdbx_chem_comp_identifier.comp_id A1L3Z _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{S},4~{S})-2-[(1~{S})-1,2-bis(oxidanyl)ethyl]pyrrolidine-3,4-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1L3Z "Create component" 2024-08-22 PDBJ A1L3Z "Initial release" 2024-11-27 RCSB #