data_A1L61 # _chem_comp.id A1L61 _chem_comp.name "8-methoxy-2,2-dimethyl-7-(3-methylbut-2-enyl)-5,9-bis(oxidanyl)pyrano[3,2-b]xanthen-6-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H24 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-12-19 _chem_comp.pdbx_modified_date 2025-01-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 408.444 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1L61 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6KJZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1L61 CAB C1 C 0 1 N N N N N N -24.837 -8.056 -32.234 5.438 -2.664 -0.143 CAB A1L61 1 A1L61 CAR C2 C 0 1 N N N N N N -25.956 -7.220 -31.686 4.212 -2.719 0.731 CAR A1L61 2 A1L61 CAC C3 C 0 1 N N N N N N -26.742 -6.473 -32.723 4.221 -3.546 1.991 CAC A1L61 3 A1L61 CAK C4 C 0 1 N N N N N N -26.220 -7.144 -30.389 3.138 -2.048 0.395 CAK A1L61 4 A1L61 CAN C5 C 0 1 N N N N N N -27.304 -6.351 -29.711 3.169 -1.119 -0.791 CAN A1L61 5 A1L61 CAW C6 C 0 1 Y N N N N N -27.580 -6.859 -28.311 2.704 0.251 -0.369 CAW A1L61 6 A1L61 CBC C7 C 0 1 Y N N N N N -26.995 -6.282 -27.129 1.341 0.544 -0.317 CBC A1L61 7 A1L61 CAY C8 C 0 1 N N N N N N -26.114 -5.060 -27.125 0.331 -0.478 -0.660 CAY A1L61 8 A1L61 OAF O1 O 0 1 N N N N N N -25.842 -4.439 -28.148 0.629 -1.521 -1.213 OAF A1L61 9 A1L61 CBB C9 C 0 1 Y N N N N N -25.599 -4.624 -25.802 -1.060 -0.158 -0.291 CBB A1L61 10 A1L61 CAT C10 C 0 1 Y N N N N N -24.729 -3.508 -25.663 -2.054 -1.143 -0.315 CAT A1L61 11 A1L61 OAH O2 O 0 1 N N N N N N -24.345 -2.781 -26.759 -1.755 -2.412 -0.691 OAH A1L61 12 A1L61 CAV C11 C 0 1 Y N N N N N -24.246 -3.140 -24.390 -3.353 -0.803 0.052 CAV A1L61 13 A1L61 CAI C12 C 0 1 N N N N N N -23.300 -2.056 -24.178 -4.440 -1.805 0.048 CAI A1L61 14 A1L61 CAJ C13 C 0 1 N N N N N N -22.779 -1.849 -22.973 -5.697 -1.364 0.079 CAJ A1L61 15 A1L61 CBD C14 C 0 1 N N N N N N -23.052 -2.762 -21.811 -5.975 0.116 0.103 CBD A1L61 16 A1L61 CAD C15 C 0 1 N N N N N N -23.233 -1.982 -20.517 -7.304 0.367 0.819 CAD A1L61 17 A1L61 CAE C16 C 0 1 N N N N N N -21.964 -3.814 -21.678 -6.069 0.635 -1.333 CAE A1L61 18 A1L61 OAP O3 O 0 1 N N N N N N -24.300 -3.510 -22.003 -4.933 0.811 0.788 OAP A1L61 19 A1L61 CAU C17 C 0 1 Y N N N N N -24.655 -3.890 -23.271 -3.656 0.514 0.436 CAU A1L61 20 A1L61 CAM C18 C 0 1 Y N N N N N -25.491 -4.986 -23.386 -2.670 1.482 0.453 CAM A1L61 21 A1L61 CBA C19 C 0 1 Y N N N N N -25.951 -5.334 -24.644 -1.367 1.162 0.090 CBA A1L61 22 A1L61 OAQ O4 O 0 1 N N N N N N -26.769 -6.447 -24.690 -0.417 2.119 0.100 OAQ A1L61 23 A1L61 CAZ C20 C 0 1 Y N N N N N -27.274 -6.912 -25.895 0.898 1.820 0.068 CAZ A1L61 24 A1L61 CAL C21 C 0 1 Y N N N N N -28.061 -8.042 -25.792 1.837 2.786 0.409 CAL A1L61 25 A1L61 CAS C22 C 0 1 Y N N N N N -28.618 -8.581 -26.936 3.187 2.490 0.360 CAS A1L61 26 A1L61 OAG O5 O 0 1 N N N N N N -29.348 -9.723 -26.834 4.097 3.441 0.696 OAG A1L61 27 A1L61 CAX C23 C 0 1 Y N N N N N -28.394 -7.984 -28.173 3.624 1.220 -0.026 CAX A1L61 28 A1L61 OAO O6 O 0 1 N N N N N N -29.011 -8.514 -29.287 4.955 0.942 -0.069 OAO A1L61 29 A1L61 CAA C24 C 0 1 N N N N N N -30.428 -8.369 -29.324 5.631 1.198 -1.302 CAA A1L61 30 A1L61 H1 H1 H 0 1 N N N N N N -24.319 -8.564 -31.407 6.029 -1.785 0.115 H1 A1L61 31 A1L61 H2 H2 H 0 1 N N N N N N -25.245 -8.806 -32.927 6.036 -3.562 0.012 H2 A1L61 32 A1L61 H3 H3 H 0 1 N N N N N N -24.126 -7.410 -32.770 5.137 -2.605 -1.189 H3 A1L61 33 A1L61 H4 H4 H 0 1 N N N N N N -27.536 -5.891 -32.233 4.564 -2.933 2.825 H4 A1L61 34 A1L61 H5 H5 H 0 1 N N N N N N -26.073 -5.792 -33.270 3.213 -3.907 2.196 H5 A1L61 35 A1L61 H6 H6 H 0 1 N N N N N N -27.193 -7.188 -33.427 4.892 -4.395 1.863 H6 A1L61 36 A1L61 H7 H7 H 0 1 N N N N N N -25.579 -7.722 -29.740 2.229 -2.161 0.968 H7 A1L61 37 A1L61 H8 H8 H 0 1 N N N N N N -26.991 -5.298 -29.653 4.188 -1.055 -1.175 H8 A1L61 38 A1L61 H9 H9 H 0 1 N N N N N N -28.226 -6.427 -30.306 2.511 -1.502 -1.571 H9 A1L61 39 A1L61 H10 H10 H 0 1 N N N N N N -24.749 -3.145 -27.538 -1.486 -2.985 0.040 H10 A1L61 40 A1L61 H11 H11 H 0 1 N N N N N N -23.020 -1.417 -25.002 -4.222 -2.862 0.020 H11 A1L61 41 A1L61 H12 H12 H 0 1 N N N N N N -22.136 -0.994 -22.824 -6.516 -2.068 0.086 H12 A1L61 42 A1L61 H13 H13 H 0 1 N N N N N N -23.430 -2.681 -19.691 -7.244 -0.010 1.840 H13 A1L61 43 A1L61 H14 H14 H 0 1 N N N N N N -22.318 -1.411 -20.302 -7.509 1.438 0.839 H14 A1L61 44 A1L61 H15 H15 H 0 1 N N N N N N -24.081 -1.290 -20.622 -8.106 -0.146 0.288 H15 A1L61 45 A1L61 H16 H16 H 0 1 N N N N N N -22.188 -4.467 -20.822 -6.877 0.120 -1.853 H16 A1L61 46 A1L61 H17 H17 H 0 1 N N N N N N -21.922 -4.416 -22.598 -6.271 1.706 -1.319 H17 A1L61 47 A1L61 H18 H18 H 0 1 N N N N N N -20.994 -3.320 -21.518 -5.128 0.449 -1.849 H18 A1L61 48 A1L61 H19 H19 H 0 1 N N N N N N -25.778 -5.556 -22.515 -2.913 2.492 0.750 H19 A1L61 49 A1L61 H20 H20 H 0 1 N N N N N N -28.239 -8.499 -24.830 1.512 3.769 0.714 H20 A1L61 50 A1L61 H21 H21 H 0 1 N N N N N N -29.398 -9.987 -25.923 4.332 3.447 1.634 H21 A1L61 51 A1L61 H22 H22 H 0 1 N N N N N N -30.819 -8.822 -30.247 5.181 0.600 -2.095 H22 A1L61 52 A1L61 H23 H23 H 0 1 N N N N N N -30.871 -8.873 -28.452 5.545 2.256 -1.551 H23 A1L61 53 A1L61 H24 H24 H 0 1 N N N N N N -30.688 -7.300 -29.301 6.684 0.933 -1.201 H24 A1L61 54 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1L61 CAC CAR SING N N 1 A1L61 CAB CAR SING N N 2 A1L61 CAR CAK DOUB N N 3 A1L61 CAK CAN SING N N 4 A1L61 CAN CAW SING N N 5 A1L61 CAA OAO SING N N 6 A1L61 OAO CAX SING N N 7 A1L61 CAW CAX DOUB Y N 8 A1L61 CAW CBC SING Y N 9 A1L61 CAX CAS SING Y N 10 A1L61 OAF CAY DOUB N N 11 A1L61 CBC CAY SING N N 12 A1L61 CBC CAZ DOUB Y N 13 A1L61 CAY CBB SING N N 14 A1L61 CAS OAG SING N N 15 A1L61 CAS CAL DOUB Y N 16 A1L61 OAH CAT SING N N 17 A1L61 CAZ CAL SING Y N 18 A1L61 CAZ OAQ SING N N 19 A1L61 CBB CAT DOUB Y N 20 A1L61 CBB CBA SING Y N 21 A1L61 CAT CAV SING Y N 22 A1L61 OAQ CBA SING N N 23 A1L61 CBA CAM DOUB Y N 24 A1L61 CAV CAI SING N N 25 A1L61 CAV CAU DOUB Y N 26 A1L61 CAI CAJ DOUB N N 27 A1L61 CAM CAU SING Y N 28 A1L61 CAU OAP SING N N 29 A1L61 CAJ CBD SING N N 30 A1L61 OAP CBD SING N N 31 A1L61 CBD CAE SING N N 32 A1L61 CBD CAD SING N N 33 A1L61 CAB H1 SING N N 34 A1L61 CAB H2 SING N N 35 A1L61 CAB H3 SING N N 36 A1L61 CAC H4 SING N N 37 A1L61 CAC H5 SING N N 38 A1L61 CAC H6 SING N N 39 A1L61 CAK H7 SING N N 40 A1L61 CAN H8 SING N N 41 A1L61 CAN H9 SING N N 42 A1L61 OAH H10 SING N N 43 A1L61 CAI H11 SING N N 44 A1L61 CAJ H12 SING N N 45 A1L61 CAD H13 SING N N 46 A1L61 CAD H14 SING N N 47 A1L61 CAD H15 SING N N 48 A1L61 CAE H16 SING N N 49 A1L61 CAE H17 SING N N 50 A1L61 CAE H18 SING N N 51 A1L61 CAM H19 SING N N 52 A1L61 CAL H20 SING N N 53 A1L61 OAG H21 SING N N 54 A1L61 CAA H22 SING N N 55 A1L61 CAA H23 SING N N 56 A1L61 CAA H24 SING N N 57 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1L61 InChI InChI 1.06 "InChI=1S/C24H24O6/c1-12(2)6-7-14-19-17(10-15(25)23(14)28-5)29-18-11-16-13(8-9-24(3,4)30-16)21(26)20(18)22(19)27/h6,8-11,25-26H,7H2,1-5H3" A1L61 InChIKey InChI 1.06 HQWHKELJHUFLGD-UHFFFAOYSA-N A1L61 SMILES_CANONICAL CACTVS 3.385 "COc1c(O)cc2Oc3cc4OC(C)(C)C=Cc4c(O)c3C(=O)c2c1CC=C(C)C" A1L61 SMILES CACTVS 3.385 "COc1c(O)cc2Oc3cc4OC(C)(C)C=Cc4c(O)c3C(=O)c2c1CC=C(C)C" A1L61 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=CCc1c2c(cc(c1OC)O)Oc3cc4c(c(c3C2=O)O)C=CC(O4)(C)C)C" A1L61 SMILES "OpenEye OEToolkits" 2.0.7 "CC(=CCc1c2c(cc(c1OC)O)Oc3cc4c(c(c3C2=O)O)C=CC(O4)(C)C)C" # _pdbx_chem_comp_identifier.comp_id A1L61 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "8-methoxy-2,2-dimethyl-7-(3-methylbut-2-enyl)-5,9-bis(oxidanyl)pyrano[3,2-b]xanthen-6-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1L61 "Create component" 2024-12-19 PDBJ A1L61 "Initial release" 2025-01-22 RCSB #