data_A1L64 # _chem_comp.id A1L64 _chem_comp.name "Coenzyme Q4" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H42 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "Ubiquinone-4; 2,3-dimethoxy-5-methyl-6-[(2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraenyl]cyclohexa-2,5-diene-1,4-dione" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-12-25 _chem_comp.pdbx_modified_date 2025-04-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 454.641 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1L64 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9KC5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1L64 C1 C1 C 0 1 N N N N N N 110.971 126.260 114.117 5.264 -0.652 1.535 C1 A1L64 1 A1L64 C2 C2 C 0 1 N N N N N N 112.210 126.977 113.986 6.002 0.629 1.556 C2 A1L64 2 A1L64 C3 C3 C 0 1 N N N N N N 112.341 128.310 114.408 6.206 1.384 0.305 C3 A1L64 3 A1L64 C4 C4 C 0 1 N N N N N N 111.198 129.003 114.877 5.715 0.902 -0.860 C4 A1L64 4 A1L64 C5 C5 C 0 1 N N N N N N 109.993 128.279 115.031 4.979 -0.377 -0.875 C5 A1L64 5 A1L64 C6 C6 C 0 1 N N N N N N 109.871 126.924 114.619 4.778 -1.129 0.383 C6 A1L64 6 A1L64 C1M C7 C 0 1 N N N N N N 110.963 124.826 113.687 5.062 -1.425 2.813 C1M A1L64 7 A1L64 C3M C8 C 0 1 N N N N N N 113.981 129.879 113.722 6.296 3.636 1.057 C3M A1L64 8 A1L64 C4M C9 C 0 1 N N N N N N 112.101 130.844 116.092 6.743 0.996 -3.001 C4M A1L64 9 A1L64 C7 C10 C 0 1 N N N N N N 108.545 126.230 114.781 4.026 -2.435 0.366 C7 A1L64 10 A1L64 C8 C11 C 0 1 N N N N N N 108.384 125.577 116.125 2.547 -2.163 0.461 C8 A1L64 11 A1L64 C9 C12 C 0 1 N N N N N N 107.452 125.829 117.027 1.747 -2.548 -0.503 C9 A1L64 12 A1L64 C10 C13 C 0 1 N N N N N N 106.335 126.826 116.816 2.303 -3.282 -1.696 C10 A1L64 13 A1L64 C11 C14 C 0 1 N N N N N N 107.474 125.142 118.361 0.271 -2.257 -0.418 C11 A1L64 14 A1L64 C12 C15 C 0 1 N N N N N N 106.826 123.789 118.363 -0.038 -0.964 -1.174 C12 A1L64 15 A1L64 C13 C16 C 0 1 N N N N N N 106.104 123.508 119.638 -1.514 -0.673 -1.090 C13 A1L64 16 A1L64 C14 C17 C 0 1 N N N N N N 105.241 122.528 119.882 -1.933 0.429 -0.519 C14 A1L64 17 A1L64 C15 C18 C 0 1 N N N N N N 105.418 121.106 119.453 -0.938 1.413 0.042 C15 A1L64 18 A1L64 C16 C19 C 0 1 N N N N N N 103.837 122.884 120.269 -3.410 0.714 -0.422 C16 A1L64 19 A1L64 C17 C20 C 0 1 N N N N N N 103.519 122.666 121.707 -3.932 0.244 0.937 C17 A1L64 20 A1L64 C18 C21 C 0 1 N N N N N N 102.142 122.111 121.863 -5.409 0.528 1.034 C18 A1L64 21 A1L64 C19 C22 C 0 1 N N N N N N 101.596 121.575 122.945 -6.259 -0.460 1.165 C19 A1L64 22 A1L64 C20 C23 C 0 1 N N N N N N 102.250 121.564 124.293 -5.767 -1.884 1.150 C20 A1L64 23 A1L64 C21 C24 C 0 1 N N N N N N 100.274 120.873 122.855 -7.729 -0.172 1.332 C21 A1L64 24 A1L64 C22 C25 C 0 1 N N N N N N 100.422 119.395 122.549 -8.420 -0.242 -0.031 C22 A1L64 25 A1L64 C23 C26 C 0 1 N N N N N N 99.774 118.578 123.622 -9.889 0.046 0.135 C23 A1L64 26 A1L64 C24 C27 C 0 1 N N N N N N 100.095 117.363 124.056 -10.434 1.057 -0.494 C24 A1L64 27 A1L64 C25 C28 C 0 1 N N N N N N 99.628 116.819 125.370 -9.569 2.016 -1.270 C25 A1L64 28 A1L64 C26 C29 C 0 1 N N N N N N 100.891 116.404 123.214 -11.927 1.262 -0.443 C26 A1L64 29 A1L64 O2 O1 O 0 1 N N N N N N 113.189 126.440 113.488 6.441 1.059 2.604 O2 A1L64 30 A1L64 O3 O2 O 0 1 N N N N N N 113.657 128.631 114.318 6.884 2.560 0.323 O3 A1L64 31 A1L64 O4 O3 O 0 1 N N N N N N 111.012 130.252 115.384 5.900 1.594 -2.014 O4 A1L64 32 A1L64 O5 O4 O 0 1 N N N N N N 109.061 128.863 115.563 4.538 -0.812 -1.920 O5 A1L64 33 A1L64 H1 H1 H 0 1 N N N N N N 109.960 124.402 113.840 5.895 -2.113 2.957 H1 A1L64 34 A1L64 H2 H2 H 0 1 N N N N N N 111.229 124.761 112.622 5.013 -0.732 3.653 H2 A1L64 35 A1L64 H3 H3 H 0 1 N N N N N N 111.695 124.261 114.283 4.131 -1.990 2.753 H3 A1L64 36 A1L64 H4 H4 H 0 1 N N N N N N 115.073 130.010 113.714 5.281 3.808 0.700 H4 A1L64 37 A1L64 H5 H5 H 0 1 N N N N N N 113.602 129.902 112.690 6.270 3.382 2.117 H5 A1L64 38 A1L64 H6 H6 H 0 1 N N N N N N 113.519 130.692 114.301 6.889 4.540 0.914 H6 A1L64 39 A1L64 H7 H7 H 0 1 N N N N N N 111.810 131.845 116.442 6.374 -0.001 -3.239 H7 A1L64 40 A1L64 H8 H8 H 0 1 N N N N N N 112.362 130.215 116.956 6.739 1.610 -3.902 H8 A1L64 41 A1L64 H9 H9 H 0 1 N N N N N N 112.971 130.928 115.424 7.760 0.924 -2.614 H9 A1L64 42 A1L64 H10 H10 H 0 1 N N N N N N 107.743 126.972 114.654 4.239 -2.965 -0.562 H10 A1L64 43 A1L64 H11 H11 H 0 1 N N N N N N 108.456 125.457 114.003 4.339 -3.045 1.214 H11 A1L64 44 A1L64 H12 H12 H 0 1 N N N N N N 109.109 124.819 116.382 2.146 -1.651 1.323 H12 A1L64 45 A1L64 H13 H13 H 0 1 N N N N N N 105.693 126.853 117.709 2.383 -4.345 -1.464 H13 A1L64 46 A1L64 H14 H14 H 0 1 N N N N N N 106.763 127.824 116.642 1.639 -3.145 -2.549 H14 A1L64 47 A1L64 H15 H15 H 0 1 N N N N N N 105.736 126.526 115.943 3.291 -2.888 -1.937 H15 A1L64 48 A1L64 H16 H16 H 0 1 N N N N N N 108.523 125.023 118.671 -0.288 -3.081 -0.864 H16 A1L64 49 A1L64 H17 H17 H 0 1 N N N N N N 106.947 125.779 119.086 -0.018 -2.146 0.627 H17 A1L64 50 A1L64 H18 H18 H 0 1 N N N N N N 106.107 123.740 117.532 0.521 -0.140 -0.728 H18 A1L64 51 A1L64 H19 H19 H 0 1 N N N N N N 107.604 123.024 118.221 0.251 -1.075 -2.219 H19 A1L64 52 A1L64 H20 H20 H 0 1 N N N N N N 106.307 124.180 120.459 -2.227 -1.373 -1.500 H20 A1L64 53 A1L64 H23 H23 H 0 1 N N N N N N 104.555 120.512 119.787 -0.588 2.069 -0.755 H23 A1L64 54 A1L64 H24 H24 H 0 1 N N N N N N 105.492 121.060 118.356 -1.415 2.009 0.820 H24 A1L64 55 A1L64 H25 H25 H 0 1 N N N N N N 106.338 120.700 119.900 -0.092 0.872 0.465 H25 A1L64 56 A1L64 H26 H26 H 0 1 N N N N N N 103.676 123.948 120.039 -3.581 1.785 -0.526 H26 A1L64 57 A1L64 H27 H27 H 0 1 N N N N N N 103.149 122.271 119.668 -3.935 0.183 -1.216 H27 A1L64 58 A1L64 H28 H28 H 0 1 N N N N N N 104.244 121.958 122.134 -3.761 -0.828 1.041 H28 A1L64 59 A1L64 H29 H29 H 0 1 N N N N N N 103.585 123.625 122.241 -3.407 0.775 1.731 H29 A1L64 60 A1L64 H30 H30 H 0 1 N N N N N N 101.513 122.151 120.986 -5.766 1.546 0.994 H30 A1L64 61 A1L64 H31 H31 H 0 1 N N N N N N 101.591 121.061 125.017 -5.492 -2.185 2.161 H31 A1L64 62 A1L64 H32 H32 H 0 1 N N N N N N 103.207 121.025 124.232 -6.556 -2.537 0.779 H32 A1L64 63 A1L64 H33 H33 H 0 1 N N N N N N 102.432 122.598 124.620 -4.896 -1.961 0.499 H33 A1L64 64 A1L64 H34 H34 H 0 1 N N N N N N 99.680 121.341 122.056 -8.170 -0.911 2.001 H34 A1L64 65 A1L64 H35 H35 H 0 1 N N N N N N 99.749 120.984 123.816 -7.858 0.824 1.755 H35 A1L64 66 A1L64 H36 H36 H 0 1 N N N N N N 99.942 119.174 121.584 -7.978 0.497 -0.701 H36 A1L64 67 A1L64 H37 H37 H 0 1 N N N N N N 101.491 119.141 122.494 -8.290 -1.238 -0.454 H37 A1L64 68 A1L64 H38 H38 H 0 1 N N N N N N 98.929 119.039 124.112 -10.494 -0.582 0.774 H38 A1L64 69 A1L64 H41 H41 H 0 1 N N N N N N 99.059 117.593 125.906 -9.498 1.685 -2.306 H41 A1L64 70 A1L64 H42 H42 H 0 1 N N N N N N 98.984 115.944 125.197 -10.011 3.013 -1.237 H42 A1L64 71 A1L64 H43 H43 H 0 1 N N N N N N 100.498 116.520 125.973 -8.573 2.046 -0.829 H43 A1L64 72 A1L64 H44 H44 H 0 1 N N N N N N 101.039 115.465 123.768 -12.239 1.396 0.593 H44 A1L64 73 A1L64 H45 H45 H 0 1 N N N N N N 100.347 116.197 122.281 -12.193 2.147 -1.021 H45 A1L64 74 A1L64 H46 H46 H 0 1 N N N N N N 101.869 116.848 122.978 -12.428 0.389 -0.862 H46 A1L64 75 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1L64 O2 C2 DOUB N N 1 A1L64 C1M C1 SING N N 2 A1L64 C3M O3 SING N N 3 A1L64 C2 C1 SING N N 4 A1L64 C2 C3 SING N N 5 A1L64 C1 C6 DOUB N N 6 A1L64 O3 C3 SING N N 7 A1L64 C3 C4 DOUB N N 8 A1L64 C6 C7 SING N N 9 A1L64 C6 C5 SING N N 10 A1L64 C7 C8 SING N N 11 A1L64 C4 C5 SING N N 12 A1L64 C4 O4 SING N N 13 A1L64 C5 O5 DOUB N N 14 A1L64 O4 C4M SING N N 15 A1L64 C8 C9 DOUB N E 16 A1L64 C10 C9 SING N N 17 A1L64 C9 C11 SING N N 18 A1L64 C11 C12 SING N N 19 A1L64 C12 C13 SING N N 20 A1L64 C15 C14 SING N N 21 A1L64 C13 C14 DOUB N E 22 A1L64 C14 C16 SING N N 23 A1L64 C16 C17 SING N N 24 A1L64 C17 C18 SING N N 25 A1L64 C18 C19 DOUB N E 26 A1L64 C22 C21 SING N N 27 A1L64 C22 C23 SING N N 28 A1L64 C21 C19 SING N N 29 A1L64 C19 C20 SING N N 30 A1L64 C26 C24 SING N N 31 A1L64 C23 C24 DOUB N N 32 A1L64 C24 C25 SING N N 33 A1L64 C1M H1 SING N N 34 A1L64 C1M H2 SING N N 35 A1L64 C1M H3 SING N N 36 A1L64 C3M H4 SING N N 37 A1L64 C3M H5 SING N N 38 A1L64 C3M H6 SING N N 39 A1L64 C4M H7 SING N N 40 A1L64 C4M H8 SING N N 41 A1L64 C4M H9 SING N N 42 A1L64 C7 H10 SING N N 43 A1L64 C7 H11 SING N N 44 A1L64 C8 H12 SING N N 45 A1L64 C10 H13 SING N N 46 A1L64 C10 H14 SING N N 47 A1L64 C10 H15 SING N N 48 A1L64 C11 H16 SING N N 49 A1L64 C11 H17 SING N N 50 A1L64 C12 H18 SING N N 51 A1L64 C12 H19 SING N N 52 A1L64 C13 H20 SING N N 53 A1L64 C15 H23 SING N N 54 A1L64 C15 H24 SING N N 55 A1L64 C15 H25 SING N N 56 A1L64 C16 H26 SING N N 57 A1L64 C16 H27 SING N N 58 A1L64 C17 H28 SING N N 59 A1L64 C17 H29 SING N N 60 A1L64 C18 H30 SING N N 61 A1L64 C20 H31 SING N N 62 A1L64 C20 H32 SING N N 63 A1L64 C20 H33 SING N N 64 A1L64 C21 H34 SING N N 65 A1L64 C21 H35 SING N N 66 A1L64 C22 H36 SING N N 67 A1L64 C22 H37 SING N N 68 A1L64 C23 H38 SING N N 69 A1L64 C25 H41 SING N N 70 A1L64 C25 H42 SING N N 71 A1L64 C25 H43 SING N N 72 A1L64 C26 H44 SING N N 73 A1L64 C26 H45 SING N N 74 A1L64 C26 H46 SING N N 75 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1L64 InChI InChI 1.06 "InChI=1S/C29H42O4/c1-20(2)12-9-13-21(3)14-10-15-22(4)16-11-17-23(5)18-19-25-24(6)26(30)28(32-7)29(33-8)27(25)31/h12,14,16,18H,9-11,13,15,17,19H2,1-8H3/b21-14+,22-16+,23-18+" A1L64 InChIKey InChI 1.06 XGCJRRDNIMSYNC-INVBOZNNSA-N A1L64 SMILES_CANONICAL CACTVS 3.385 "COC1=C(OC)C(=O)C(=C(C)C1=O)C\C=C(/C)CC\C=C(/C)CC\C=C(/C)CCC=C(C)C" A1L64 SMILES CACTVS 3.385 "COC1=C(OC)C(=O)C(=C(C)C1=O)CC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)C" A1L64 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=C(C(=O)C(=C(C1=O)OC)OC)C/C=C(\C)/CCC=C(C)CC/C=C(\C)/CCC=C(C)C" A1L64 SMILES "OpenEye OEToolkits" 2.0.7 "CC1=C(C(=O)C(=C(C1=O)OC)OC)CC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)C" # _pdbx_chem_comp_identifier.comp_id A1L64 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2,3-dimethoxy-5-methyl-6-[(2~{E},10~{E})-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraenyl]cyclohexa-2,5-diene-1,4-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1L64 "Create component" 2024-12-25 PDBJ A1L64 "Initial release" 2025-04-23 RCSB # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 A1L64 Ubiquinone-4 PUBCHEM ? 2 A1L64 "2,3-dimethoxy-5-methyl-6-[(2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraenyl]cyclohexa-2,5-diene-1,4-dione" PUBCHEM ? #