data_A1L7I # _chem_comp.id A1L7I _chem_comp.name "(2~{S})-~{N}-[3-[3-[bis(azanyl)methylideneamino]propyl]-5-(1~{H}-indol-3-yl)pyrazin-2-yl]-2-methyl-butanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H27 N7 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-02-05 _chem_comp.pdbx_modified_date 2026-04-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 393.485 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1L7I _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9LR8 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1L7I C10 C1 C 0 1 N N S N N N 72.517 12.722 21.595 -4.974 1.456 0.115 C10 A1L7I 1 A1L7I C13 C2 C 0 1 Y N N N N N 77.809 9.390 25.084 2.838 1.829 -0.337 C13 A1L7I 2 A1L7I C15 C3 C 0 1 Y N N N N N 73.602 10.842 24.097 -1.230 1.089 0.137 C15 A1L7I 3 A1L7I C17 C4 C 0 1 Y N N N N N 78.283 8.091 24.966 3.958 0.980 0.100 C17 A1L7I 4 A1L7I C20 C5 C 0 1 Y N N N N N 79.604 8.096 25.494 5.128 1.653 -0.290 C20 A1L7I 5 A1L7I C21 C6 C 0 1 N N N N N N 73.947 13.155 21.962 -5.269 1.211 1.596 C21 A1L7I 6 A1L7I C22 C7 C 0 1 Y N N N N N 78.804 10.205 25.687 3.384 2.916 -0.938 C22 A1L7I 7 A1L7I C24 C8 C 0 1 N N N N N N 72.960 12.499 19.256 -7.281 2.315 -0.310 C24 A1L7I 8 A1L7I C26 C9 C 0 1 Y N N N N N 80.430 6.743 25.461 6.367 1.085 -0.008 C26 A1L7I 9 A1L7I C28 C10 C 0 1 Y N N N N N 79.763 5.497 24.919 6.431 -0.126 0.646 C28 A1L7I 10 A1L7I C09 C11 C 0 1 N N N N N N 73.592 11.439 26.793 -0.734 -1.174 1.104 C09 A1L7I 11 A1L7I C11 C12 C 0 1 Y N N N N N 74.268 10.925 25.501 -0.286 0.140 0.515 C11 A1L7I 12 A1L7I C12 C13 C 0 1 N N N N N N 74.539 11.059 27.993 -0.933 -2.194 -0.019 C12 A1L7I 13 A1L7I C14 C14 C 0 1 N N N N N N 72.650 11.673 20.507 -5.791 2.653 -0.376 C14 A1L7I 14 A1L7I C16 C15 C 0 1 Y N N N N N 76.406 9.851 24.663 1.395 1.548 -0.160 C16 A1L7I 15 A1L7I C18 C16 C 0 1 N N N N N N 71.732 12.216 22.806 -3.505 1.743 -0.064 C18 A1L7I 16 A1L7I C19 C17 C 0 1 N N N N N N 73.887 11.184 29.353 -1.387 -3.527 0.578 C19 A1L7I 17 A1L7I C23 C18 C 0 1 Y N N N N N 75.789 9.801 23.243 0.446 2.504 -0.529 C23 A1L7I 18 A1L7I C25 C19 C 0 1 Y N N N N N 77.577 6.768 24.405 4.045 -0.244 0.761 C25 A1L7I 19 A1L7I C27 C20 C 0 1 Y N N N N N 78.375 5.491 24.394 5.271 -0.786 1.028 C27 A1L7I 20 A1L7I C29 C21 C 0 1 N N N N N N 72.960 9.174 30.389 -0.807 -5.551 -0.571 C29 A1L7I 21 A1L7I N02 N1 N 0 1 N N N N N N 72.253 11.372 23.924 -2.590 0.824 0.303 N02 A1L7I 22 A1L7I N03 N2 N 0 1 Y N N N N N 75.625 10.420 25.732 1.000 0.388 0.359 N03 A1L7I 23 A1L7I N04 N3 N 0 1 Y N N N N N 79.911 9.389 25.922 4.744 2.820 -0.914 N04 A1L7I 24 A1L7I N05 N4 N 0 1 Y N N N N N 74.383 10.279 22.996 -0.839 2.249 -0.376 N05 A1L7I 25 A1L7I N06 N5 N 0 1 N N N N N N 72.899 10.111 29.506 -1.579 -4.504 -0.497 N06 A1L7I 26 A1L7I N07 N6 N 0 1 N N N N N N 74.049 9.063 31.391 -1.065 -6.531 -1.500 N07 A1L7I 27 A1L7I N08 N7 N 0 1 N N N N N N 71.897 8.130 30.424 0.267 -5.675 0.279 N08 A1L7I 28 A1L7I O01 O1 O 0 1 N N N N N N 70.599 12.599 22.813 -3.147 2.800 -0.537 O01 A1L7I 29 A1L7I H1 H1 H 0 1 N N N N N N 71.989 13.593 21.179 -5.244 0.571 -0.461 H1 A1L7I 30 A1L7I H2 H2 H 0 1 N N N N N N 73.908 13.920 22.752 -4.998 2.095 2.172 H2 A1L7I 31 A1L7I H3 H3 H 0 1 N N N N N N 74.513 12.283 22.323 -6.331 1.003 1.726 H3 A1L7I 32 A1L7I H4 H4 H 0 1 N N N N N N 74.443 13.571 21.073 -4.687 0.358 1.946 H4 A1L7I 33 A1L7I H5 H5 H 0 1 N N N N N N 78.720 11.256 25.919 2.826 3.734 -1.369 H5 A1L7I 34 A1L7I H6 H6 H 0 1 N N N N N N 73.078 11.828 18.393 -7.863 3.168 -0.660 H6 A1L7I 35 A1L7I H7 H7 H 0 1 N N N N N N 72.134 13.200 19.065 -7.486 1.451 -0.943 H7 A1L7I 36 A1L7I H8 H8 H 0 1 N N N N N N 73.891 13.064 19.411 -7.557 2.084 0.719 H8 A1L7I 37 A1L7I H9 H9 H 0 1 N N N N N N 81.449 6.711 25.818 7.275 1.590 -0.302 H9 A1L7I 38 A1L7I H10 H10 H 0 1 N N N N N N 80.321 4.573 24.914 7.393 -0.566 0.864 H10 A1L7I 39 A1L7I H11 H11 H 0 1 N N N N N N 73.465 12.530 26.744 0.025 -1.539 1.796 H11 A1L7I 40 A1L7I H12 H12 H 0 1 N N N N N N 72.610 10.961 26.921 -1.673 -1.032 1.637 H12 A1L7I 41 A1L7I H13 H13 H 0 1 N N N N N N 74.865 10.017 27.860 -1.692 -1.828 -0.711 H13 A1L7I 42 A1L7I H14 H14 H 0 1 N N N N N N 75.415 11.724 27.967 0.006 -2.336 -0.553 H14 A1L7I 43 A1L7I H15 H15 H 0 1 N N N N N N 71.712 11.111 20.385 -5.586 3.517 0.257 H15 A1L7I 44 A1L7I H16 H16 H 0 1 N N N N N N 73.470 10.975 20.731 -5.515 2.884 -1.405 H16 A1L7I 45 A1L7I H17 H17 H 0 1 N N N N N N 74.652 11.097 30.139 -0.628 -3.893 1.270 H17 A1L7I 46 A1L7I H18 H18 H 0 1 N N N N N N 73.387 12.161 29.435 -2.327 -3.385 1.112 H18 A1L7I 47 A1L7I H19 H19 H 0 1 N N N N N N 76.375 9.419 22.420 0.765 3.449 -0.943 H19 A1L7I 48 A1L7I H20 H20 H 0 1 N N N N N N 76.559 6.791 24.045 3.146 -0.762 1.061 H20 A1L7I 49 A1L7I H21 H21 H 0 1 N N N N N N 77.942 4.580 24.008 5.338 -1.734 1.540 H21 A1L7I 50 A1L7I H22 H22 H 0 1 N N N N N N 71.596 11.142 24.642 -2.876 -0.022 0.681 H22 A1L7I 51 A1L7I H23 H23 H 0 1 N N N N N N 80.777 9.681 26.328 5.353 3.479 -1.284 H23 A1L7I 52 A1L7I H25 H25 H 0 1 N N N N N N 74.047 8.311 32.050 -0.490 -7.311 -1.555 H25 A1L7I 53 A1L7I H26 H26 H 0 1 N N N N N N 74.785 9.740 31.407 -1.822 -6.444 -2.099 H26 A1L7I 54 A1L7I H27 H27 H 0 1 N N N N N N 71.938 7.397 31.103 0.883 -6.417 0.177 H27 A1L7I 55 A1L7I H24 H24 H 0 1 N N N N N N 71.142 8.163 29.769 0.408 -5.021 0.981 H24 A1L7I 56 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1L7I C24 C14 SING N N 1 A1L7I C14 C10 SING N N 2 A1L7I C10 C21 SING N N 3 A1L7I C10 C18 SING N N 4 A1L7I C18 O01 DOUB N N 5 A1L7I C18 N02 SING N N 6 A1L7I N05 C23 DOUB Y N 7 A1L7I N05 C15 SING Y N 8 A1L7I C23 C16 SING Y N 9 A1L7I N02 C15 SING N N 10 A1L7I C15 C11 DOUB Y N 11 A1L7I C27 C25 DOUB Y N 12 A1L7I C27 C28 SING Y N 13 A1L7I C25 C17 SING Y N 14 A1L7I C16 C13 SING N N 15 A1L7I C16 N03 DOUB Y N 16 A1L7I C28 C26 DOUB Y N 17 A1L7I C17 C13 SING Y N 18 A1L7I C17 C20 DOUB Y N 19 A1L7I C13 C22 DOUB Y N 20 A1L7I C26 C20 SING Y N 21 A1L7I C20 N04 SING Y N 22 A1L7I C11 N03 SING Y N 23 A1L7I C11 C09 SING N N 24 A1L7I C22 N04 SING Y N 25 A1L7I C09 C12 SING N N 26 A1L7I C12 C19 SING N N 27 A1L7I C19 N06 SING N N 28 A1L7I N06 C29 DOUB N N 29 A1L7I C29 N08 SING N N 30 A1L7I C29 N07 SING N N 31 A1L7I C10 H1 SING N N 32 A1L7I C21 H2 SING N N 33 A1L7I C21 H3 SING N N 34 A1L7I C21 H4 SING N N 35 A1L7I C22 H5 SING N N 36 A1L7I C24 H6 SING N N 37 A1L7I C24 H7 SING N N 38 A1L7I C24 H8 SING N N 39 A1L7I C26 H9 SING N N 40 A1L7I C28 H10 SING N N 41 A1L7I C09 H11 SING N N 42 A1L7I C09 H12 SING N N 43 A1L7I C12 H13 SING N N 44 A1L7I C12 H14 SING N N 45 A1L7I C14 H15 SING N N 46 A1L7I C14 H16 SING N N 47 A1L7I C19 H17 SING N N 48 A1L7I C19 H18 SING N N 49 A1L7I C23 H19 SING N N 50 A1L7I C25 H20 SING N N 51 A1L7I C27 H21 SING N N 52 A1L7I N02 H22 SING N N 53 A1L7I N04 H23 SING N N 54 A1L7I N07 H25 SING N N 55 A1L7I N07 H26 SING N N 56 A1L7I N08 H27 SING N N 57 A1L7I N08 H24 SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1L7I InChI InChI 1.06 "InChI=1S/C21H27N7O/c1-3-13(2)20(29)28-19-17(9-6-10-24-21(22)23)27-18(12-26-19)15-11-25-16-8-5-4-7-14(15)16/h4-5,7-8,11-13,25H,3,6,9-10H2,1-2H3,(H4,22,23,24)(H,26,28,29)/t13-/m0/s1" A1L7I InChIKey InChI 1.06 PSYJEEMZZIZTSR-ZDUSSCGKSA-N A1L7I SMILES_CANONICAL CACTVS 3.385 "CC[C@H](C)C(=O)Nc1ncc(nc1CCCN=C(N)N)c2c[nH]c3ccccc23" A1L7I SMILES CACTVS 3.385 "CC[CH](C)C(=O)Nc1ncc(nc1CCCN=C(N)N)c2c[nH]c3ccccc23" A1L7I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@H](C)C(=O)Nc1c(nc(cn1)c2c[nH]c3c2cccc3)CCCN=C(N)N" A1L7I SMILES "OpenEye OEToolkits" 2.0.7 "CCC(C)C(=O)Nc1c(nc(cn1)c2c[nH]c3c2cccc3)CCCN=C(N)N" # _pdbx_chem_comp_identifier.comp_id A1L7I _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-~{N}-[3-[3-[bis(azanyl)methylideneamino]propyl]-5-(1~{H}-indol-3-yl)pyrazin-2-yl]-2-methyl-butanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1L7I "Create component" 2025-02-05 PDBJ A1L7I "Initial release" 2026-04-08 RCSB #