data_A1L7O # _chem_comp.id A1L7O _chem_comp.name "3-[1-[[(2~{S})-4-(phenylmethyl)-1,4-oxazepan-2-yl]methyl]piperidin-4-yl]phenol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H32 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-02-12 _chem_comp.pdbx_modified_date 2026-02-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 380.523 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1L7O _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9LUS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1L7O OBB O1 O 0 1 N N N N N N -6.152 14.529 7.782 8.162 1.248 0.763 OBB A1L7O 1 A1L7O CAX C1 C 0 1 Y N N N N N -6.612 13.584 8.653 6.860 1.331 0.380 CAX A1L7O 2 A1L7O CAY C2 C 0 1 Y N N N N N -7.960 13.561 8.953 6.330 2.548 -0.020 CAY A1L7O 3 A1L7O CAZ C3 C 0 1 Y N N N N N -8.441 12.604 9.836 5.007 2.630 -0.409 CAZ A1L7O 4 A1L7O CBA C4 C 0 1 Y N N N N N -7.597 11.671 10.421 4.212 1.499 -0.400 CBA A1L7O 5 A1L7O CAV C5 C 0 1 Y N N N N N -6.233 11.678 10.122 4.738 0.284 -0.002 CAV A1L7O 6 A1L7O CAW C6 C 0 1 Y N N N N N -5.755 12.646 9.234 6.062 0.196 0.382 CAW A1L7O 7 A1L7O CAS C7 C 0 1 N N N N N N -5.310 10.644 10.724 3.868 -0.947 0.007 CAS A1L7O 8 A1L7O CAR C8 C 0 1 N N N N N N -5.736 9.623 11.703 3.348 -1.216 -1.407 CAR A1L7O 9 A1L7O CAQ C9 C 0 1 N N N N N N -5.367 10.317 12.992 2.417 -2.430 -1.381 CAQ A1L7O 10 A1L7O NAP N1 N 0 1 N N N N N N -3.938 10.721 13.096 1.296 -2.169 -0.469 NAP A1L7O 11 A1L7O CAU C10 C 0 1 N N N N N N -3.323 11.259 11.852 1.768 -1.955 0.905 CAU A1L7O 12 A1L7O CAT C11 C 0 1 N N N N N N -3.831 10.580 10.579 2.679 -0.726 0.947 CAT A1L7O 13 A1L7O CAO C12 C 0 1 N N N N N N -3.761 11.679 14.226 0.493 -1.030 -0.933 CAO A1L7O 14 A1L7O CAA C13 C 0 1 N N S N N N -4.896 12.696 14.311 -0.794 -0.943 -0.110 CAA A1L7O 15 A1L7O OAG O2 O 0 1 N N N N N N -4.450 13.988 14.718 -1.515 -2.131 -0.276 OAG A1L7O 16 A1L7O CAF C14 C 0 1 N N N N N N -5.340 15.048 14.330 -2.212 -2.537 0.924 CAF A1L7O 17 A1L7O CAE C15 C 0 1 N N N N N N -6.407 14.672 13.288 -3.454 -1.784 1.099 CAE A1L7O 18 A1L7O CAD C16 C 0 1 N N N N N N -7.419 13.603 13.735 -3.200 -0.269 1.204 CAD A1L7O 19 A1L7O NAC N2 N 0 1 N N N N N N -7.121 13.081 15.066 -3.001 0.249 -0.126 NAC A1L7O 20 A1L7O CAB C17 C 0 1 N N N N N N -5.963 12.231 15.299 -1.579 0.310 -0.549 CAB A1L7O 21 A1L7O CAH C18 C 0 1 N N N N N N -7.998 13.245 15.956 -3.654 1.556 -0.285 CAH A1L7O 22 A1L7O CAI C19 C 0 1 Y N N N N N -8.554 12.085 16.710 -5.148 1.386 -0.186 CAI A1L7O 23 A1L7O CAN C20 C 0 1 Y N N N N N -9.625 12.392 17.538 -5.891 1.129 -1.323 CAN A1L7O 24 A1L7O CAM C21 C 0 1 Y N N N N N -10.182 11.432 18.356 -7.262 0.974 -1.232 CAM A1L7O 25 A1L7O CAL C22 C 0 1 Y N N N N N -9.694 10.136 18.389 -7.889 1.075 -0.004 CAL A1L7O 26 A1L7O CAK C23 C 0 1 Y N N N N N -8.627 9.824 17.567 -7.145 1.332 1.133 CAK A1L7O 27 A1L7O CAJ C24 C 0 1 Y N N N N N -8.059 10.776 16.725 -5.774 1.482 1.042 CAJ A1L7O 28 A1L7O H1 H1 H 0 1 N N N N N N -5.214 14.427 7.670 8.304 1.395 1.708 H1 A1L7O 29 A1L7O H2 H2 H 0 1 N N N N N N -8.632 14.279 8.506 6.951 3.432 -0.027 H2 A1L7O 30 A1L7O H3 H3 H 0 1 N N N N N N -9.495 12.585 10.073 4.593 3.578 -0.720 H3 A1L7O 31 A1L7O H4 H4 H 0 1 N N N N N N -7.995 10.939 11.108 3.178 1.565 -0.705 H4 A1L7O 32 A1L7O H5 H5 H 0 1 N N N N N N -4.703 12.669 8.992 6.474 -0.754 0.689 H5 A1L7O 33 A1L7O H6 H6 H 0 1 N N N N N N -5.463 9.957 9.879 4.451 -1.802 0.350 H6 A1L7O 34 A1L7O H7 H7 H 0 1 N N N N N N -6.816 9.426 11.642 2.799 -0.344 -1.765 H7 A1L7O 35 A1L7O H8 H8 H 0 1 N N N N N N -5.183 8.681 11.575 4.188 -1.416 -2.072 H8 A1L7O 36 A1L7O H9 H9 H 0 1 N N N N N N -5.986 11.222 13.083 2.033 -2.616 -2.384 H9 A1L7O 37 A1L7O H10 H10 H 0 1 N N N N N N -5.591 9.634 13.825 2.969 -3.304 -1.036 H10 A1L7O 38 A1L7O H12 H12 H 0 1 N N N N N N -2.234 11.117 11.912 0.913 -1.795 1.562 H12 A1L7O 39 A1L7O H13 H13 H 0 1 N N N N N N -3.549 12.334 11.788 2.324 -2.831 1.239 H13 A1L7O 40 A1L7O H14 H14 H 0 1 N N N N N N -3.485 9.537 10.524 3.042 -0.576 1.964 H14 A1L7O 41 A1L7O H15 H15 H 0 1 N N N N N N -3.499 11.124 9.683 2.120 0.153 0.626 H15 A1L7O 42 A1L7O H16 H16 H 0 1 N N N N N N -3.724 11.111 15.168 1.065 -0.110 -0.813 H16 A1L7O 43 A1L7O H17 H17 H 0 1 N N N N N N -2.813 12.219 14.086 0.243 -1.167 -1.985 H17 A1L7O 44 A1L7O H18 H18 H 0 1 N N N N N N -5.362 12.769 13.317 -0.529 -0.837 0.942 H18 A1L7O 45 A1L7O H19 H19 H 0 1 N N N N N N -4.732 15.864 13.913 -2.446 -3.600 0.858 H19 A1L7O 46 A1L7O H20 H20 H 0 1 N N N N N N -5.859 15.402 15.233 -1.567 -2.367 1.786 H20 A1L7O 47 A1L7O H21 H21 H 0 1 N N N N N N -5.890 14.296 12.393 -4.108 -1.976 0.249 H21 A1L7O 48 A1L7O H22 H22 H 0 1 N N N N N N -6.967 15.583 13.032 -3.949 -2.124 2.009 H22 A1L7O 49 A1L7O H23 H23 H 0 1 N N N N N N -8.424 14.050 13.747 -4.061 0.217 1.663 H23 A1L7O 50 A1L7O H24 H24 H 0 1 N N N N N N -7.396 12.771 13.015 -2.310 -0.086 1.806 H24 A1L7O 51 A1L7O H26 H26 H 0 1 N N N N N N -6.219 11.177 15.117 -1.115 1.191 -0.107 H26 A1L7O 52 A1L7O H27 H27 H 0 1 N N N N N N -5.604 12.348 16.332 -1.535 0.393 -1.635 H27 A1L7O 53 A1L7O H28 H28 H 0 1 N N N N N N -7.562 13.924 16.704 -3.312 2.231 0.499 H28 A1L7O 54 A1L7O H29 H29 H 0 1 N N N N N N -8.851 13.738 15.467 -3.399 1.972 -1.260 H29 A1L7O 55 A1L7O H30 H30 H 0 1 N N N N N N -10.027 13.395 17.542 -5.401 1.050 -2.282 H30 A1L7O 56 A1L7O H31 H31 H 0 1 N N N N N N -11.018 11.697 18.986 -7.843 0.774 -2.120 H31 A1L7O 57 A1L7O H32 H32 H 0 1 N N N N N N -10.134 9.392 19.037 -8.960 0.954 0.067 H32 A1L7O 58 A1L7O H33 H33 H 0 1 N N N N N N -8.226 8.821 17.578 -7.635 1.411 2.092 H33 A1L7O 59 A1L7O H34 H34 H 0 1 N N N N N N -7.235 10.504 16.082 -5.193 1.679 1.931 H34 A1L7O 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1L7O OBB CAX SING N N 1 A1L7O CAX CAY DOUB Y N 2 A1L7O CAX CAW SING Y N 3 A1L7O CAY CAZ SING Y N 4 A1L7O CAW CAV DOUB Y N 5 A1L7O CAZ CBA DOUB Y N 6 A1L7O CAV CBA SING Y N 7 A1L7O CAV CAS SING N N 8 A1L7O CAT CAS SING N N 9 A1L7O CAT CAU SING N N 10 A1L7O CAS CAR SING N N 11 A1L7O CAR CAQ SING N N 12 A1L7O CAU NAP SING N N 13 A1L7O CAQ NAP SING N N 14 A1L7O NAP CAO SING N N 15 A1L7O CAE CAD SING N N 16 A1L7O CAE CAF SING N N 17 A1L7O CAD NAC SING N N 18 A1L7O CAO CAA SING N N 19 A1L7O CAA OAG SING N N 20 A1L7O CAA CAB SING N N 21 A1L7O CAF OAG SING N N 22 A1L7O NAC CAB SING N N 23 A1L7O NAC CAH SING N N 24 A1L7O CAH CAI SING N N 25 A1L7O CAI CAJ DOUB Y N 26 A1L7O CAI CAN SING Y N 27 A1L7O CAJ CAK SING Y N 28 A1L7O CAN CAM DOUB Y N 29 A1L7O CAK CAL DOUB Y N 30 A1L7O CAM CAL SING Y N 31 A1L7O OBB H1 SING N N 32 A1L7O CAY H2 SING N N 33 A1L7O CAZ H3 SING N N 34 A1L7O CBA H4 SING N N 35 A1L7O CAW H5 SING N N 36 A1L7O CAS H6 SING N N 37 A1L7O CAR H7 SING N N 38 A1L7O CAR H8 SING N N 39 A1L7O CAQ H9 SING N N 40 A1L7O CAQ H10 SING N N 41 A1L7O CAU H12 SING N N 42 A1L7O CAU H13 SING N N 43 A1L7O CAT H14 SING N N 44 A1L7O CAT H15 SING N N 45 A1L7O CAO H16 SING N N 46 A1L7O CAO H17 SING N N 47 A1L7O CAA H18 SING N N 48 A1L7O CAF H19 SING N N 49 A1L7O CAF H20 SING N N 50 A1L7O CAE H21 SING N N 51 A1L7O CAE H22 SING N N 52 A1L7O CAD H23 SING N N 53 A1L7O CAD H24 SING N N 54 A1L7O CAB H26 SING N N 55 A1L7O CAB H27 SING N N 56 A1L7O CAH H28 SING N N 57 A1L7O CAH H29 SING N N 58 A1L7O CAN H30 SING N N 59 A1L7O CAM H31 SING N N 60 A1L7O CAL H32 SING N N 61 A1L7O CAK H33 SING N N 62 A1L7O CAJ H34 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1L7O InChI InChI 1.06 "InChI=1S/C24H32N2O2/c27-23-9-4-8-22(16-23)21-10-13-25(14-11-21)18-24-19-26(12-5-15-28-24)17-20-6-2-1-3-7-20/h1-4,6-9,16,21,24,27H,5,10-15,17-19H2/t24-/m0/s1" A1L7O InChIKey InChI 1.06 UQIBNGMNYAIMIZ-DEOSSOPVSA-N A1L7O SMILES_CANONICAL CACTVS 3.385 "Oc1cccc(c1)C2CCN(CC2)C[C@H]3CN(CCCO3)Cc4ccccc4" A1L7O SMILES CACTVS 3.385 "Oc1cccc(c1)C2CCN(CC2)C[CH]3CN(CCCO3)Cc4ccccc4" A1L7O SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CN2CCCO[C@H](C2)CN3CCC(CC3)c4cccc(c4)O" A1L7O SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CN2CCCOC(C2)CN3CCC(CC3)c4cccc(c4)O" # _pdbx_chem_comp_identifier.comp_id A1L7O _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "3-[1-[[(2~{S})-4-(phenylmethyl)-1,4-oxazepan-2-yl]methyl]piperidin-4-yl]phenol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1L7O "Create component" 2025-02-12 PDBJ A1L7O "Initial release" 2026-02-18 RCSB #