data_A1L81 # _chem_comp.id A1L81 _chem_comp.name "6-[2-(3,5-dinitro-4-oxidanyl-phenyl)ethanoylamino]hexanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H19 N3 O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 2 _chem_comp.pdbx_initial_date 2025-04-08 _chem_comp.pdbx_modified_date 2025-10-31 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 357.316 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1L81 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9UDO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1L81 C10 C1 C 0 1 N N N N N N -23.237 15.341 -2.095 -0.298 -0.006 -0.568 C10 A1L81 1 A1L81 N12 N1 N 0 1 N N N N N N -23.644 15.177 -3.417 -1.599 -0.008 -0.918 N12 A1L81 2 A1L81 C20 C2 C 0 1 N N N N N N -23.882 13.762 -5.541 -4.016 -0.005 -0.543 C20 A1L81 3 A1L81 C21 C3 C 0 1 N N N N N N -22.400 13.953 -5.996 -5.099 0.002 0.538 C21 A1L81 4 A1L81 C22 C4 C 0 1 N N N N N N -21.933 11.458 -6.573 -7.562 0.005 0.959 C22 A1L81 5 A1L81 C01 C5 C 0 1 Y N N N N N -18.907 16.940 -1.838 4.011 1.219 -0.084 C01 A1L81 6 A1L81 C02 C6 C 0 1 Y N N N N N -18.709 17.065 -3.212 4.656 0.002 0.227 C02 A1L81 7 A1L81 C03 C7 C 0 1 Y N N N N N -19.834 17.070 -4.035 4.013 -1.217 -0.078 C03 A1L81 8 A1L81 C04 C8 C 0 1 Y N N N N N -21.111 16.955 -3.507 2.744 -1.202 -0.686 C04 A1L81 9 A1L81 C05 C9 C 0 1 Y N N N N N -21.326 16.838 -2.125 2.128 -0.004 -0.983 C05 A1L81 10 A1L81 C06 C10 C 0 1 Y N N N N N -20.195 16.822 -1.309 2.742 1.197 -0.691 C06 A1L81 11 A1L81 C09 C11 C 0 1 N N N N N N -22.705 16.693 -1.581 0.769 -0.007 -1.633 C09 A1L81 12 A1L81 C18 C12 C 0 1 N N N N N N -24.139 13.903 -3.998 -2.636 -0.001 0.117 C18 A1L81 13 A1L81 C19 C13 C 0 1 N N N N N N -21.476 12.717 -5.827 -6.479 -0.002 -0.123 C19 A1L81 14 A1L81 C23 C14 C 0 1 N N N N N N -20.861 10.319 -6.566 -8.921 0.001 0.308 C23 A1L81 15 A1L81 N08 N2 N 1 1 N N N N N N -17.771 16.922 -0.869 4.601 2.387 0.203 N08 A1L81 16 A1L81 N11 N3 N 1 1 N N N N N N -19.769 17.194 -5.531 4.609 -2.383 0.209 N11 A1L81 17 A1L81 O07 O1 O 0 1 N N N N N N -17.437 17.184 -3.764 5.873 0.005 0.810 O07 A1L81 18 A1L81 O13 O2 O 0 1 N N N N N N -17.993 16.546 0.259 4.041 3.435 -0.067 O13 A1L81 19 A1L81 O14 O3 O 0 1 N N N N N N -16.691 17.277 -1.265 5.697 2.401 0.734 O14 A1L81 20 A1L81 O15 O4 O 0 1 N N N N N N -20.431 16.381 -6.127 4.051 -3.433 -0.056 O15 A1L81 21 A1L81 O16 O5 O 0 1 N N N N N N -19.096 18.043 -6.040 5.707 -2.393 0.734 O16 A1L81 22 A1L81 O17 O6 O 0 1 N N N N N N -23.242 14.395 -1.319 0.015 0.002 0.604 O17 A1L81 23 A1L81 O24 O7 O 0 1 N N N N N N -21.281 9.142 -6.647 -9.014 -0.007 -0.896 O24 A1L81 24 A1L81 O25 O8 O 0 1 N N N N N N -19.658 10.657 -6.477 -10.028 0.006 1.067 O25 A1L81 25 A1L81 H121 H1 H 0 0 N N N N N N -23.600 15.975 -4.018 -1.850 -0.014 -1.855 H121 A1L81 26 A1L81 H202 H2 H 0 0 N N N N N N -24.204 12.756 -5.848 -4.122 -0.899 -1.157 H202 A1L81 27 A1L81 H201 H3 H 0 0 N N N N N N -24.495 14.516 -6.057 -4.122 0.881 -1.170 H201 A1L81 28 A1L81 H212 H4 H 0 0 N N N N N N -21.971 14.778 -5.409 -4.993 -0.883 1.164 H212 A1L81 29 A1L81 H211 H5 H 0 0 N N N N N N -22.407 14.226 -7.062 -4.993 0.896 1.152 H211 A1L81 30 A1L81 H222 H6 H 0 0 N N N N N N -22.849 11.080 -6.094 -7.456 -0.880 1.585 H222 A1L81 31 A1L81 H221 H7 H 0 0 N N N N N N -22.150 11.729 -7.617 -7.456 0.900 1.573 H221 A1L81 32 A1L81 H041 H8 H 0 0 N N N N N N -21.960 16.955 -4.175 2.250 -2.133 -0.921 H041 A1L81 33 A1L81 H061 H9 H 0 0 N N N N N N -20.318 16.716 -0.241 2.245 2.126 -0.931 H061 A1L81 34 A1L81 H092 H10 H 0 0 N N N N N N -22.683 16.699 -0.481 0.664 -0.898 -2.251 H092 A1L81 35 A1L81 H091 H11 H 0 0 N N N N N N -23.343 17.514 -1.940 0.661 0.882 -2.255 H091 A1L81 36 A1L81 H182 H12 H 0 0 N N N N N N -23.635 13.070 -3.486 -2.530 -0.887 0.744 H182 A1L81 37 A1L81 H181 H13 H 0 0 N N N N N N -25.223 13.840 -3.821 -2.530 0.893 0.731 H181 A1L81 38 A1L81 H192 H14 H 0 0 N N N N N N -20.475 12.987 -6.195 -6.585 0.884 -0.749 H192 A1L81 39 A1L81 H191 H15 H 0 0 N N N N N N -21.420 12.477 -4.755 -6.585 -0.896 -0.737 H191 A1L81 40 A1L81 H071 H16 H 0 0 N N N N N N -17.507 17.258 -4.709 5.847 0.007 1.776 H071 A1L81 41 A1L81 H3 H19 H 0 1 N N N N N N -19.110 9.881 -6.480 -10.877 0.003 0.605 H3 A1L81 42 A1L81 H1 H18 H 0 1 N N N N N N -16.058 17.214 -0.559 6.083 3.268 0.921 H1 A1L81 43 A1L81 H2 H20 H 0 1 N N N N N N -19.164 17.977 -6.985 6.097 -3.258 0.922 H2 A1L81 44 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1L81 C01 C02 DOUB Y N 1 A1L81 C01 C06 SING Y N 2 A1L81 C01 N08 SING N N 3 A1L81 C02 C03 SING Y N 4 A1L81 C02 O07 SING N N 5 A1L81 C03 C04 DOUB Y N 6 A1L81 C03 N11 SING N N 7 A1L81 C04 C05 SING Y N 8 A1L81 C05 C06 DOUB Y N 9 A1L81 C05 C09 SING N N 10 A1L81 N08 O13 DOUB N N 11 A1L81 N08 O14 SING N N 12 A1L81 C09 C10 SING N N 13 A1L81 C10 N12 SING N N 14 A1L81 C10 O17 DOUB N N 15 A1L81 N11 O15 DOUB N N 16 A1L81 N11 O16 SING N N 17 A1L81 C18 N12 SING N N 18 A1L81 C18 C20 SING N N 19 A1L81 C21 C19 SING N N 20 A1L81 C19 C22 SING N N 21 A1L81 C20 C21 SING N N 22 A1L81 C22 C23 SING N N 23 A1L81 C23 O24 DOUB N N 24 A1L81 C23 O25 SING N N 25 A1L81 N12 H121 SING N N 26 A1L81 C20 H202 SING N N 27 A1L81 C20 H201 SING N N 28 A1L81 C21 H212 SING N N 29 A1L81 C21 H211 SING N N 30 A1L81 C22 H222 SING N N 31 A1L81 C22 H221 SING N N 32 A1L81 C04 H041 SING N N 33 A1L81 C06 H061 SING N N 34 A1L81 C09 H092 SING N N 35 A1L81 C09 H091 SING N N 36 A1L81 C18 H182 SING N N 37 A1L81 C18 H181 SING N N 38 A1L81 C19 H192 SING N N 39 A1L81 C19 H191 SING N N 40 A1L81 O07 H071 SING N N 41 A1L81 O25 H3 SING N N 42 A1L81 O14 H1 SING N N 43 A1L81 O16 H2 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1L81 InChI InChI 1.06 "InChI=1S/C14H17N3O8/c18-12(15-5-3-1-2-4-13(19)20)8-9-6-10(16(22)23)14(21)11(7-9)17(24)25/h6-7H,1-5,8H2,(H3-2,15,18,19,20,21,22,23,24,25)/p+2" A1L81 InChIKey InChI 1.06 QPRRCFGXTFIQKQ-UHFFFAOYSA-P A1L81 SMILES_CANONICAL CACTVS 3.385 "OC(=O)CCCCCNC(=O)Cc1cc(c(O)c(c1)[N+](O)=O)[N+](O)=O" A1L81 SMILES CACTVS 3.385 "OC(=O)CCCCCNC(=O)Cc1cc(c(O)c(c1)[N+](O)=O)[N+](O)=O" A1L81 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c(cc(c(c1[N+](=O)O)O)[N+](=O)O)CC(=O)NCCCCCC(=O)O" A1L81 SMILES "OpenEye OEToolkits" 2.0.7 "c1c(cc(c(c1[N+](=O)O)O)[N+](=O)O)CC(=O)NCCCCCC(=O)O" # _pdbx_chem_comp_identifier.comp_id A1L81 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "oxidanyl-oxidanylidene-[2-oxidanyl-5-[2-oxidanylidene-2-[(6-oxidanyl-6-oxidanylidene-hexyl)amino]ethyl]-3-[oxidanyl(oxidanylidene)azaniumyl]phenyl]azanium" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1L81 "Create component" 2025-04-08 PDBJ A1L81 "Modify atom id" 2025-10-30 PDBJ A1L81 "Initial release" 2025-11-05 RCSB #