data_A1L87 # _chem_comp.id A1L87 _chem_comp.name "Acylated Cefprozil" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H21 N3 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(2~{S},5~{Z})-2-[(1~{R})-1-[[(2~{S})-2-azanyl-2-(4-hydroxyphenyl)ethanoyl]amino]-2-oxidanylidene-ethyl]-5-propylidene-2~{H}-1,3-thiazine-4-carboxylic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-04-17 _chem_comp.pdbx_modified_date 2026-04-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 391.441 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1L87 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9UJ5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1L87 N1 N1 N 0 1 N N N N N N 15.144 5.428 57.309 1.571 -0.001 -0.435 N1 A1L87 1 A1L87 N3 N2 N 0 1 N N N N N N 10.830 8.852 60.853 -4.415 -2.412 -1.386 N3 A1L87 2 A1L87 C4 C1 C 0 1 N N N N N N 15.781 4.684 59.557 3.983 0.122 -0.030 C4 A1L87 3 A1L87 C5 C2 C 0 1 N N N N N N 15.512 4.450 58.177 2.647 0.669 -0.299 C5 A1L87 4 A1L87 C6 C3 C 0 1 N N S N N N 14.466 6.432 58.109 1.408 -1.445 -0.379 C6 A1L87 5 A1L87 C7 C4 C 0 1 N N R N N N 13.254 7.118 57.546 0.077 -1.779 0.299 C7 A1L87 6 A1L87 C8 C5 C 0 1 N N N N N N 12.510 6.124 56.639 0.020 -1.113 1.650 C8 A1L87 7 A1L87 C10 C6 C 0 1 N N S N N N 12.299 9.092 60.720 -3.380 -1.374 -1.295 C10 A1L87 8 A1L87 C13 C7 C 0 1 Y N N N N N 13.381 6.912 63.658 -5.374 0.897 0.966 C13 A1L87 9 A1L87 C15 C8 C 0 1 Y N N N N N 15.219 8.304 62.983 -4.155 2.253 -0.597 C15 A1L87 10 A1L87 C17 C9 C 0 1 N N N N N N 15.586 6.052 60.150 4.216 -1.369 -0.170 C17 A1L87 11 A1L87 C1 C10 C 0 1 N N N N N N 15.875 4.324 62.748 7.301 1.203 -0.488 C1 A1L87 12 A1L87 C2 C11 C 0 1 N N N N N N 16.213 3.255 61.741 6.383 0.391 0.429 C2 A1L87 13 A1L87 C3 C12 C 0 1 N N N N N N 16.247 3.664 60.290 4.977 0.927 0.333 C3 A1L87 14 A1L87 O1 O1 O 0 1 N N N N N N 11.990 5.113 57.021 -0.854 -0.316 1.894 O1 A1L87 15 A1L87 N2 N3 N 0 1 N N N N N N 12.584 7.550 58.767 -1.028 -1.294 -0.531 N2 A1L87 16 A1L87 C9 C13 C 0 1 N N N N N N 12.786 8.768 59.301 -2.243 -1.872 -0.441 C9 A1L87 17 A1L87 O2 O2 O 0 1 N N N N N N 13.359 9.681 58.679 -2.420 -2.794 0.328 O2 A1L87 18 A1L87 C11 C14 C 0 1 Y N N N N N 13.100 8.437 61.827 -3.967 -0.132 -0.675 C11 A1L87 19 A1L87 C12 C15 C 0 1 Y N N N N N 12.591 7.457 62.659 -4.839 -0.240 0.392 C12 A1L87 20 A1L87 C14 C16 C 0 1 Y N N N N N 14.697 7.331 63.819 -5.035 2.148 0.470 C14 A1L87 21 A1L87 C16 C17 C 0 1 Y N N N N N 14.410 8.852 62.007 -3.619 1.113 -1.164 C16 A1L87 22 A1L87 O3 O3 O 0 1 N N N N N N 15.504 6.782 64.786 -5.565 3.268 1.029 O3 A1L87 23 A1L87 S1 S1 S 0 1 N N N N N N 15.758 7.386 58.939 2.767 -2.197 0.563 S1 A1L87 24 A1L87 C18 C18 C 0 1 N N N N N N 15.608 3.058 57.549 2.539 2.147 -0.427 C18 A1L87 25 A1L87 O4 O4 O 0 1 N N N N N N 15.179 2.092 58.237 1.329 2.727 -0.534 O4 A1L87 26 A1L87 O5 O5 O 0 1 N N N N N N 16.085 2.993 56.389 3.542 2.830 -0.436 O5 A1L87 27 A1L87 H2 H2 H 0 1 N N N N N N 10.539 9.070 61.785 -4.064 -3.233 -1.857 H2 A1L87 28 A1L87 H3 H3 H 0 1 N N N N N N 10.337 9.433 60.205 -4.775 -2.646 -0.472 H3 A1L87 29 A1L87 H5 H5 H 0 1 N N N N N N 14.058 5.857 58.953 1.405 -1.847 -1.392 H5 A1L87 30 A1L87 H6 H6 H 0 1 N N N N N N 13.564 7.990 56.951 -0.007 -2.858 0.422 H6 A1L87 31 A1L87 H8 H8 H 0 1 N N N N N N 12.444 10.175 60.844 -3.010 -1.142 -2.293 H8 A1L87 32 A1L87 H9 H9 H 0 1 N N N N N N 12.973 6.158 64.315 -6.059 0.813 1.797 H9 A1L87 33 A1L87 H10 H10 H 0 1 N N N N N N 16.243 8.629 63.093 -3.891 3.226 -0.985 H10 A1L87 34 A1L87 H11 H11 H 0 1 N N N N N N 16.335 6.200 60.942 4.304 -1.635 -1.224 H11 A1L87 35 A1L87 H12 H12 H 0 1 N N N N N N 14.577 6.103 60.586 5.122 -1.657 0.364 H12 A1L87 36 A1L87 H13 H13 H 0 1 N N N N N N 15.885 3.892 63.760 7.288 2.249 -0.180 H13 A1L87 37 A1L87 H14 H14 H 0 1 N N N N N N 16.618 5.133 62.687 8.317 0.816 -0.418 H14 A1L87 38 A1L87 H15 H15 H 0 1 N N N N N N 14.875 4.728 62.532 6.951 1.122 -1.516 H15 A1L87 39 A1L87 H16 H16 H 0 1 N N N N N N 15.464 2.456 61.842 6.395 -0.654 0.122 H16 A1L87 40 A1L87 H18 H18 H 0 1 N N N N N N 16.787 2.950 59.685 4.778 1.964 0.559 H18 A1L87 41 A1L87 H20 H20 H 0 1 N N N N N N 11.954 6.921 59.222 -0.887 -0.558 -1.146 H20 A1L87 42 A1L87 H21 H21 H 0 1 N N N N N N 11.575 7.115 62.530 -5.102 -1.214 0.778 H21 A1L87 43 A1L87 H22 H22 H 0 1 N N N N N N 14.809 9.625 61.367 -2.927 1.195 -1.989 H22 A1L87 44 A1L87 H23 H23 H 0 1 N N N N N N 15.013 6.134 65.278 -5.040 3.632 1.754 H23 A1L87 45 A1L87 H24 H24 H 0 1 N N N N N N 15.269 1.286 57.743 1.310 3.690 -0.614 H24 A1L87 46 A1L87 H1 H1 H 0 1 N N N N N N 12.452 6.352 55.585 0.761 -1.348 2.399 H1 A1L87 47 A1L87 H4 H4 H 0 1 N N N N N N 17.207 2.861 61.997 6.733 0.472 1.458 H4 A1L87 48 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1L87 O5 C18 DOUB N N 1 A1L87 C8 O1 DOUB N N 2 A1L87 C8 C7 SING N N 3 A1L87 N1 C6 SING N N 4 A1L87 N1 C5 DOUB N N 5 A1L87 C7 C6 SING N N 6 A1L87 C7 N2 SING N N 7 A1L87 C18 C5 SING N N 8 A1L87 C18 O4 SING N N 9 A1L87 C6 S1 SING N N 10 A1L87 C5 C4 SING N N 11 A1L87 O2 C9 DOUB N N 12 A1L87 N2 C9 SING N N 13 A1L87 S1 C17 SING N N 14 A1L87 C9 C10 SING N N 15 A1L87 C4 C17 SING N N 16 A1L87 C4 C3 DOUB N Z 17 A1L87 C3 C2 SING N N 18 A1L87 C10 N3 SING N N 19 A1L87 C10 C11 SING N N 20 A1L87 C2 C1 SING N N 21 A1L87 C11 C16 DOUB Y N 22 A1L87 C11 C12 SING Y N 23 A1L87 C16 C15 SING Y N 24 A1L87 C12 C13 DOUB Y N 25 A1L87 C15 C14 DOUB Y N 26 A1L87 C13 C14 SING Y N 27 A1L87 C14 O3 SING N N 28 A1L87 N3 H2 SING N N 29 A1L87 N3 H3 SING N N 30 A1L87 C6 H5 SING N N 31 A1L87 C7 H6 SING N N 32 A1L87 C10 H8 SING N N 33 A1L87 C13 H9 SING N N 34 A1L87 C15 H10 SING N N 35 A1L87 C17 H11 SING N N 36 A1L87 C17 H12 SING N N 37 A1L87 C1 H13 SING N N 38 A1L87 C1 H14 SING N N 39 A1L87 C1 H15 SING N N 40 A1L87 C2 H16 SING N N 41 A1L87 C3 H18 SING N N 42 A1L87 N2 H20 SING N N 43 A1L87 C12 H21 SING N N 44 A1L87 C16 H22 SING N N 45 A1L87 O3 H23 SING N N 46 A1L87 O4 H24 SING N N 47 A1L87 C8 H1 SING N N 48 A1L87 C2 H4 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1L87 InChI InChI 1.06 "InChI=1S/C18H21N3O5S/c1-2-3-11-9-27-17(21-15(11)18(25)26)13(8-22)20-16(24)14(19)10-4-6-12(23)7-5-10/h3-8,13-14,17,23H,2,9,19H2,1H3,(H,20,24)(H,25,26)/b11-3+/t13-,14+,17+/m1/s1" A1L87 InChIKey InChI 1.06 HNFSEOTXXHWIMD-FUINVQLHSA-N A1L87 SMILES_CANONICAL CACTVS 3.385 "CC/C=C/1CS[C@H](N=C/1C(O)=O)[C@H](NC(=O)[C@@H](N)c2ccc(O)cc2)C=O" A1L87 SMILES CACTVS 3.385 "CCC=C1CS[CH](N=C1C(O)=O)[CH](NC(=O)[CH](N)c2ccc(O)cc2)C=O" A1L87 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC/C=C/1\CS[C@H](N=C1C(=O)O)[C@@H](C=O)NC(=O)[C@H](c2ccc(cc2)O)N" A1L87 SMILES "OpenEye OEToolkits" 2.0.7 "CCC=C1CSC(N=C1C(=O)O)C(C=O)NC(=O)C(c2ccc(cc2)O)N" # _pdbx_chem_comp_identifier.comp_id A1L87 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},5~{Z})-2-[(1~{R})-1-[[(2~{S})-2-azanyl-2-(4-hydroxyphenyl)ethanoyl]amino]-2-oxidanylidene-ethyl]-5-propylidene-2~{H}-1,3-thiazine-4-carboxylic acid" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1L87 _pdbx_chem_comp_synonyms.name "(2~{S},5~{Z})-2-[(1~{R})-1-[[(2~{S})-2-azanyl-2-(4-hydroxyphenyl)ethanoyl]amino]-2-oxidanylidene-ethyl]-5-propylidene-2~{H}-1,3-thiazine-4-carboxylic acid" _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1L87 _pdbx_chem_comp_pcm.modified_residue_id SER _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C8 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1L87 "Create component" 2025-04-17 PDBJ A1L87 "Modify PCM" 2025-04-22 PDBJ A1L87 "Modify coordinates" 2025-04-25 PDBJ A1L87 "Initial release" 2026-04-22 RCSB #