data_A1L8I # _chem_comp.id A1L8I _chem_comp.name "(3~{S})-3-[(2~{S})-2-azanyl-3-oxidanyl-propyl]pyrrolidin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H14 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-04 _chem_comp.pdbx_modified_date 2026-02-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 158.198 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1L8I _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9M2U _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1L8I N3 N1 N 0 1 N N N N N N -18.423 -0.663 12.520 1.929 -0.085 -1.518 N3 A1L8I 1 A1L8I C14 C1 C 0 1 N N N N N N -17.273 -0.284 10.392 0.406 -0.598 0.330 C14 A1L8I 2 A1L8I C15 C2 C 0 1 N N S N N N -17.687 1.141 10.034 -0.799 0.015 -0.387 C15 A1L8I 3 A1L8I C16 C3 C 0 1 N N N N N N -18.841 1.458 9.064 -1.023 1.472 0.080 C16 A1L8I 4 A1L8I C17 C4 C 0 1 N N N N N N -18.330 2.650 8.248 -2.565 1.566 0.088 C17 A1L8I 5 A1L8I C18 C5 C 0 1 N N N N N N -16.544 2.024 9.601 -2.071 -0.704 0.006 C18 A1L8I 6 A1L8I C19 C6 C 0 1 N N N N N N -18.036 -2.684 11.160 2.863 -0.381 0.726 C19 A1L8I 7 A1L8I C13 C7 C 0 1 N N S N N N -18.320 -1.135 11.127 1.678 0.142 -0.089 C13 A1L8I 8 A1L8I N4 N2 N 0 1 N N N N N N -17.001 2.959 8.792 -3.041 0.190 0.274 N4 A1L8I 9 A1L8I O2 O1 O 0 1 N N N N N N -15.441 1.933 10.023 -2.196 -1.909 0.071 O2 A1L8I 10 A1L8I O3 O2 O 0 1 N N N N N N -17.927 -3.226 9.835 4.028 0.388 0.420 O3 A1L8I 11 A1L8I H1 H1 H 0 1 N N N N N N -19.102 -1.210 13.009 1.947 -1.071 -1.730 H1 A1L8I 12 A1L8I H21 H2 H 0 1 N N N N N N -17.535 -0.756 12.970 1.246 0.395 -2.085 H21 A1L8I 13 A1L8I H24 H4 H 0 1 N N N N N N -17.017 -0.803 9.457 0.271 -0.509 1.408 H24 A1L8I 14 A1L8I H23 H5 H 0 1 N N N N N N -16.382 -0.222 11.033 0.492 -1.651 0.060 H23 A1L8I 15 A1L8I H25 H6 H 0 1 N N N N N N -18.017 1.573 10.990 -0.659 -0.022 -1.467 H25 A1L8I 16 A1L8I H27 H7 H 0 1 N N N N N N -19.753 1.726 9.617 -0.618 1.627 1.080 H27 A1L8I 17 A1L8I H26 H8 H 0 1 N N N N N N -19.048 0.598 8.410 -0.592 2.179 -0.628 H26 A1L8I 18 A1L8I H29 H9 H 0 1 N N N N N N -19.003 3.512 8.365 -2.899 2.196 0.913 H29 A1L8I 19 A1L8I H28 H10 H 0 1 N N N N N N -18.257 2.384 7.183 -2.925 1.964 -0.861 H28 A1L8I 20 A1L8I H3 H11 H 0 1 N N N N N N -18.861 -3.188 11.686 2.639 -0.294 1.789 H3 A1L8I 21 A1L8I H4 H12 H 0 1 N N N N N N -17.094 -2.864 11.699 3.043 -1.427 0.477 H4 A1L8I 22 A1L8I H22 H13 H 0 1 N N N N N N -19.290 -0.986 10.630 1.555 1.209 0.094 H22 A1L8I 23 A1L8I H30 H14 H 0 1 N N N N N N -16.495 3.793 8.571 -3.940 -0.045 0.553 H30 A1L8I 24 A1L8I H33 H15 H 0 1 N N N N N N -17.756 -4.159 9.887 4.820 0.112 0.902 H33 A1L8I 25 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1L8I C17 N4 SING N N 1 A1L8I C17 C16 SING N N 2 A1L8I N4 C18 SING N N 3 A1L8I C16 C15 SING N N 4 A1L8I C18 O2 DOUB N N 5 A1L8I C18 C15 SING N N 6 A1L8I O3 C19 SING N N 7 A1L8I C15 C14 SING N N 8 A1L8I C14 C13 SING N N 9 A1L8I C13 C19 SING N N 10 A1L8I C13 N3 SING N N 11 A1L8I N3 H1 SING N N 12 A1L8I N3 H21 SING N N 13 A1L8I C14 H24 SING N N 14 A1L8I C14 H23 SING N N 15 A1L8I C15 H25 SING N N 16 A1L8I C16 H27 SING N N 17 A1L8I C16 H26 SING N N 18 A1L8I C17 H29 SING N N 19 A1L8I C17 H28 SING N N 20 A1L8I C19 H3 SING N N 21 A1L8I C19 H4 SING N N 22 A1L8I C13 H22 SING N N 23 A1L8I N4 H30 SING N N 24 A1L8I O3 H33 SING N N 25 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1L8I InChI InChI 1.06 "InChI=1S/C7H14N2O2/c8-6(4-10)3-5-1-2-9-7(5)11/h5-6,10H,1-4,8H2,(H,9,11)/t5-,6-/m0/s1" A1L8I InChIKey InChI 1.06 AVANYHSFGMYIBM-WDSKDSINSA-N A1L8I SMILES_CANONICAL CACTVS 3.385 "N[C@H](CO)C[C@@H]1CCNC1=O" A1L8I SMILES CACTVS 3.385 "N[CH](CO)C[CH]1CCNC1=O" A1L8I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1CNC(=O)[C@@H]1C[C@@H](CO)N" A1L8I SMILES "OpenEye OEToolkits" 2.0.7 "C1CNC(=O)C1CC(CO)N" # _pdbx_chem_comp_identifier.comp_id A1L8I _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{S})-3-[(2~{S})-2-azanyl-3-oxidanyl-propyl]pyrrolidin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1L8I "Create component" 2025-03-04 PDBJ A1L8I "Modify descriptor" 2025-04-30 PDBJ A1L8I "Modify coordinates" 2025-04-30 PDBJ A1L8I "Initial release" 2026-03-04 RCSB # loop_ _pdbx_chem_comp_pcm.pcm_id _pdbx_chem_comp_pcm.comp_id _pdbx_chem_comp_pcm.modified_residue_id _pdbx_chem_comp_pcm.type _pdbx_chem_comp_pcm.category _pdbx_chem_comp_pcm.position _pdbx_chem_comp_pcm.polypeptide_position _pdbx_chem_comp_pcm.comp_id_linking_atom _pdbx_chem_comp_pcm.modified_residue_id_linking_atom _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 1 A1L8I ? None "Non-standard residue" "Amino-acid backbone" C-terminal ? ? ? ? 2 A1L8I CYS None "Covalent chemical modification" "Amino-acid side chain" "Any position" C19 SG ? ? #