data_A1LV4 # _chem_comp.id A1LV4 _chem_comp.name "cyclopropyl-[5-[[4-[4-[[(3~{S},4~{S})-3-methoxy-4-oxidanyl-pyrrolidin-1-yl]methyl]-3-methyl-pyrazol-1-yl]pyrimidin-2-yl]amino]-1-methyl-indol-3-yl]methanone" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H31 N7 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-01-11 _chem_comp.pdbx_modified_date 2025-01-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 501.580 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1LV4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8XQ0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1LV4 N1 N1 N 0 1 Y N N N N N 0.074 -11.596 4.950 -0.337 -0.854 -0.399 N1 A1LV4 1 A1LV4 N3 N2 N 0 1 N N N N N N 1.155 -13.280 3.498 1.837 -0.125 0.053 N3 A1LV4 2 A1LV4 C4 C1 C 0 1 Y N N N N N 0.008 -12.469 3.908 0.927 -1.152 -0.134 C4 A1LV4 3 A1LV4 C5 C2 C 0 1 Y N N N N N 2.519 -13.261 4.037 3.149 -0.416 0.448 C5 A1LV4 4 A1LV4 C6 C3 C 0 1 Y N N N N N 2.904 -12.453 5.137 4.196 0.373 0.004 C6 A1LV4 5 A1LV4 C7 C4 C 0 1 Y N N N N N 4.241 -12.521 5.574 5.496 0.077 0.401 C7 A1LV4 6 A1LV4 C8 C5 C 0 1 Y N N N N N 5.148 -13.406 4.874 5.746 -1.014 1.248 C8 A1LV4 7 A1LV4 C10 C6 C 0 1 Y N N N N N 3.439 -14.106 3.402 3.397 -1.496 1.293 C10 A1LV4 8 A1LV4 C13 C7 C 0 1 N N N N N N 7.394 -14.029 4.985 7.777 -2.066 2.308 C13 A1LV4 9 A1LV4 C15 C8 C 0 1 N N N N N N 5.678 -10.401 8.710 8.490 2.310 -0.853 C15 A1LV4 10 A1LV4 C17 C9 C 0 1 N N N N N N 5.064 -9.725 9.941 8.729 3.819 -0.770 C17 A1LV4 11 A1LV4 C20 C10 C 0 1 Y N N N N N -1.462 -8.365 7.807 -4.702 -1.737 -1.300 C20 A1LV4 12 A1LV4 C21 C11 C 0 1 N N N N N N -2.306 -7.381 8.623 -6.060 -2.330 -1.573 C21 A1LV4 13 A1LV4 C22 C12 C 0 1 N N N N N N 0.924 -7.892 8.870 -5.373 0.761 -1.459 C22 A1LV4 14 A1LV4 C24 C13 C 0 1 N N S N N N 3.446 -6.049 8.885 -8.055 2.056 0.740 C24 A1LV4 15 A1LV4 C26 C14 C 0 1 N N N N N N 2.221 -6.994 7.261 -7.162 -0.087 -0.040 C26 A1LV4 16 A1LV4 C1 C15 C 0 1 Y N N N N N -0.997 -10.897 5.273 -1.234 -1.815 -0.583 C1 A1LV4 17 A1LV4 C11 C16 C 0 1 Y N N N N N 6.368 -12.466 6.448 7.737 -0.072 0.818 C11 A1LV4 18 A1LV4 C12 C17 C 0 1 Y N N N N N 5.100 -11.919 6.620 6.813 0.686 0.128 C12 A1LV4 19 A1LV4 C14 C18 C 0 1 N N N N N N 4.658 -10.885 7.663 7.076 1.819 -0.680 C14 A1LV4 20 A1LV4 C16 C19 C 0 1 N N N N N N 5.762 -8.878 8.869 8.812 3.105 -2.120 C16 A1LV4 21 A1LV4 C18 C20 C 0 1 Y N N N N N 0.225 -9.565 6.984 -3.082 -0.245 -0.973 C18 A1LV4 22 A1LV4 C19 C21 C 0 1 Y N N N N N -0.094 -8.587 7.906 -4.400 -0.371 -1.247 C19 A1LV4 23 A1LV4 C2 C22 C 0 1 Y N N N N N -2.164 -11.037 4.584 -0.829 -3.146 -0.495 C2 A1LV4 24 A1LV4 C23 C23 C 0 1 N N N N N N 2.025 -6.056 9.433 -6.940 2.231 -0.313 C23 A1LV4 25 A1LV4 C25 C24 C 0 1 N N S N N N 3.223 -5.876 7.519 -8.201 0.531 0.919 C25 A1LV4 26 A1LV4 C27 C25 C 0 1 N N N N N N 3.733 -3.690 9.470 -8.145 4.007 2.130 C27 A1LV4 27 A1LV4 C3 C26 C 0 1 Y N N N N N -2.232 -11.915 3.545 0.499 -3.414 -0.216 C3 A1LV4 28 A1LV4 C9 C27 C 0 1 Y N N N N N 4.755 -14.175 3.809 4.682 -1.797 1.685 C9 A1LV4 29 A1LV4 N2 N3 N 0 1 Y N N N N N -1.152 -12.620 3.215 1.341 -2.407 -0.044 N2 A1LV4 30 A1LV4 N4 N4 N 0 1 Y N N N N N 6.248 -13.243 5.480 7.108 -1.066 1.472 N4 A1LV4 31 A1LV4 N5 N5 N 0 1 Y N N N N N -0.900 -9.923 6.353 -2.564 -1.497 -0.861 N5 A1LV4 32 A1LV4 N6 N6 N 0 1 Y N N N N N -1.958 -9.160 6.848 -3.606 -2.411 -1.066 N6 A1LV4 33 A1LV4 N7 N7 N 0 1 N N N N N N 1.318 -6.851 8.419 -6.145 0.979 -0.228 N7 A1LV4 34 A1LV4 O1 O1 O 0 1 N N N N N N 3.544 -10.455 7.659 6.162 2.395 -1.234 O1 A1LV4 35 A1LV4 O2 O2 O 0 1 N N N N N N 4.456 -5.978 6.695 -9.519 0.113 0.559 O2 A1LV4 36 A1LV4 O3 O3 O 0 1 N N N N N N 4.293 -4.991 9.472 -7.673 2.667 1.974 O3 A1LV4 37 A1LV4 H1 H1 H 0 1 N N N N N N 0.988 -13.930 2.756 1.567 0.795 -0.089 H1 A1LV4 38 A1LV4 H2 H2 H 0 1 N N N N N N 2.192 -11.804 5.626 4.004 1.212 -0.648 H2 A1LV4 39 A1LV4 H3 H3 H 0 1 N N N N N N 3.110 -14.717 2.575 2.575 -2.105 1.639 H3 A1LV4 40 A1LV4 H4 H4 H 0 1 N N N N N N 8.284 -13.801 5.589 8.055 -2.924 1.696 H4 A1LV4 41 A1LV4 H5 H5 H 0 1 N N N N N N 7.164 -15.102 5.063 8.673 -1.630 2.750 H5 A1LV4 42 A1LV4 H6 H6 H 0 1 N N N N N N 7.589 -13.771 3.934 7.101 -2.388 3.100 H6 A1LV4 43 A1LV4 H7 H7 H 0 1 N N N N N N 6.598 -10.988 8.845 9.267 1.655 -0.458 H7 A1LV4 44 A1LV4 H8 H8 H 0 1 N N N N N N 3.971 -9.677 10.054 7.863 4.457 -0.590 H8 A1LV4 45 A1LV4 H9 H9 H 0 1 N N N N N N 5.530 -9.854 10.929 9.663 4.157 -0.320 H9 A1LV4 46 A1LV4 H10 H10 H 0 1 N N N N N N -3.355 -7.438 8.296 -6.595 -2.461 -0.633 H10 A1LV4 47 A1LV4 H11 H11 H 0 1 N N N N N N -2.240 -7.639 9.690 -6.625 -1.660 -2.222 H11 A1LV4 48 A1LV4 H12 H12 H 0 1 N N N N N N -1.929 -6.359 8.469 -5.943 -3.296 -2.063 H12 A1LV4 49 A1LV4 H13 H13 H 0 1 N N N N N N 0.429 -7.700 9.833 -4.825 1.669 -1.710 H13 A1LV4 50 A1LV4 H14 H14 H 0 1 N N N N N N 1.783 -8.562 9.026 -6.052 0.508 -2.273 H14 A1LV4 51 A1LV4 H15 H15 H 0 1 N N N N N N 3.903 -7.030 9.079 -8.990 2.486 0.379 H15 A1LV4 52 A1LV4 H16 H16 H 0 1 N N N N N N 2.711 -7.979 7.252 -6.708 -0.970 0.409 H16 A1LV4 53 A1LV4 H17 H17 H 0 1 N N N N N N 1.685 -6.843 6.312 -7.628 -0.342 -0.992 H17 A1LV4 54 A1LV4 H18 H18 H 0 1 N N N N N N 7.258 -12.263 7.025 8.802 0.106 0.831 H18 A1LV4 55 A1LV4 H19 H19 H 0 1 N N N N N N 6.728 -8.400 9.088 9.801 2.973 -2.559 H19 A1LV4 56 A1LV4 H20 H20 H 0 1 N N N N N N 5.169 -8.223 8.213 8.002 3.272 -2.829 H20 A1LV4 57 A1LV4 H21 H21 H 0 1 N N N N N N 1.210 -9.970 6.804 -2.538 0.682 -0.866 H21 A1LV4 58 A1LV4 H22 H22 H 0 1 N N N N N N -3.031 -10.455 4.860 -1.536 -3.949 -0.639 H22 A1LV4 59 A1LV4 H23 H23 H 0 1 N N N N N N 1.616 -5.037 9.500 -7.370 2.341 -1.309 H23 A1LV4 60 A1LV4 H24 H24 H 0 1 N N N N N N 1.979 -6.535 10.422 -6.320 3.095 -0.071 H24 A1LV4 61 A1LV4 H25 H25 H 0 1 N N N N N N 2.735 -4.910 7.325 -7.982 0.248 1.949 H25 A1LV4 62 A1LV4 H26 H26 H 0 1 N N N N N N 4.442 -2.984 9.927 -7.813 4.399 3.091 H26 A1LV4 63 A1LV4 H27 H27 H 0 1 N N N N N N 3.525 -3.382 8.435 -7.747 4.628 1.327 H27 A1LV4 64 A1LV4 H28 H28 H 0 1 N N N N N N 2.796 -3.693 10.047 -9.234 4.016 2.090 H28 A1LV4 65 A1LV4 H29 H29 H 0 1 N N N N N N -3.153 -12.038 2.994 0.845 -4.435 -0.141 H29 A1LV4 66 A1LV4 H30 H30 H 0 1 N N N N N N 5.458 -14.819 3.302 4.864 -2.639 2.336 H30 A1LV4 67 A1LV4 H32 H32 H 0 1 N N N N N N 4.237 -5.852 5.779 -9.670 -0.838 0.652 H32 A1LV4 68 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1LV4 N1 C1 DOUB Y N 1 A1LV4 N1 C4 SING Y N 2 A1LV4 C1 C2 SING Y N 3 A1LV4 C1 N5 SING N N 4 A1LV4 C2 C3 DOUB Y N 5 A1LV4 C3 N2 SING Y N 6 A1LV4 N2 C4 DOUB Y N 7 A1LV4 C4 N3 SING N N 8 A1LV4 N3 C5 SING N N 9 A1LV4 C5 C6 DOUB Y N 10 A1LV4 C5 C10 SING Y N 11 A1LV4 C6 C7 SING Y N 12 A1LV4 C7 C8 DOUB Y N 13 A1LV4 C7 C12 SING Y N 14 A1LV4 C8 C9 SING Y N 15 A1LV4 C8 N4 SING Y N 16 A1LV4 C9 C10 DOUB Y N 17 A1LV4 N4 C11 SING Y N 18 A1LV4 N4 C13 SING N N 19 A1LV4 C11 C12 DOUB Y N 20 A1LV4 C12 C14 SING N N 21 A1LV4 C14 C15 SING N N 22 A1LV4 C14 O1 DOUB N N 23 A1LV4 C15 C16 SING N N 24 A1LV4 C15 C17 SING N N 25 A1LV4 C16 C17 SING N N 26 A1LV4 N5 C18 SING Y N 27 A1LV4 N5 N6 SING Y N 28 A1LV4 C18 C19 DOUB Y N 29 A1LV4 C19 C20 SING Y N 30 A1LV4 C19 C22 SING N N 31 A1LV4 C20 N6 DOUB Y N 32 A1LV4 C20 C21 SING N N 33 A1LV4 C22 N7 SING N N 34 A1LV4 N7 C23 SING N N 35 A1LV4 N7 C26 SING N N 36 A1LV4 C23 C24 SING N N 37 A1LV4 C24 C25 SING N N 38 A1LV4 C24 O3 SING N N 39 A1LV4 C25 C26 SING N N 40 A1LV4 C25 O2 SING N N 41 A1LV4 O3 C27 SING N N 42 A1LV4 N3 H1 SING N N 43 A1LV4 C6 H2 SING N N 44 A1LV4 C10 H3 SING N N 45 A1LV4 C13 H4 SING N N 46 A1LV4 C13 H5 SING N N 47 A1LV4 C13 H6 SING N N 48 A1LV4 C15 H7 SING N N 49 A1LV4 C17 H8 SING N N 50 A1LV4 C17 H9 SING N N 51 A1LV4 C21 H10 SING N N 52 A1LV4 C21 H11 SING N N 53 A1LV4 C21 H12 SING N N 54 A1LV4 C22 H13 SING N N 55 A1LV4 C22 H14 SING N N 56 A1LV4 C24 H15 SING N N 57 A1LV4 C26 H16 SING N N 58 A1LV4 C26 H17 SING N N 59 A1LV4 C11 H18 SING N N 60 A1LV4 C16 H19 SING N N 61 A1LV4 C16 H20 SING N N 62 A1LV4 C18 H21 SING N N 63 A1LV4 C2 H22 SING N N 64 A1LV4 C23 H23 SING N N 65 A1LV4 C23 H24 SING N N 66 A1LV4 C25 H25 SING N N 67 A1LV4 C27 H26 SING N N 68 A1LV4 C27 H27 SING N N 69 A1LV4 C27 H28 SING N N 70 A1LV4 C3 H29 SING N N 71 A1LV4 C9 H30 SING N N 72 A1LV4 O2 H32 SING N N 73 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1LV4 InChI InChI 1.06 "InChI=1S/C27H31N7O3/c1-16-18(11-33-14-23(35)24(15-33)37-3)12-34(31-16)25-8-9-28-27(30-25)29-19-6-7-22-20(10-19)21(13-32(22)2)26(36)17-4-5-17/h6-10,12-13,17,23-24,35H,4-5,11,14-15H2,1-3H3,(H,28,29,30)/t23-,24-/m0/s1" A1LV4 InChIKey InChI 1.06 CBNDBWHBUUWRCT-ZEQRLZLVSA-N A1LV4 SMILES_CANONICAL CACTVS 3.385 "CO[C@H]1CN(C[C@@H]1O)Cc2cn(nc2C)c3ccnc(Nc4ccc5n(C)cc(C(=O)C6CC6)c5c4)n3" A1LV4 SMILES CACTVS 3.385 "CO[CH]1CN(C[CH]1O)Cc2cn(nc2C)c3ccnc(Nc4ccc5n(C)cc(C(=O)C6CC6)c5c4)n3" A1LV4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(cn(n1)c2ccnc(n2)Nc3ccc4c(c3)c(cn4C)C(=O)C5CC5)CN6C[C@@H]([C@H](C6)OC)O" A1LV4 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(cn(n1)c2ccnc(n2)Nc3ccc4c(c3)c(cn4C)C(=O)C5CC5)CN6CC(C(C6)OC)O" # _pdbx_chem_comp_identifier.comp_id A1LV4 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "cyclopropyl-[5-[[4-[4-[[(3~{S},4~{S})-3-methoxy-4-oxidanyl-pyrrolidin-1-yl]methyl]-3-methyl-pyrazol-1-yl]pyrimidin-2-yl]amino]-1-methyl-indol-3-yl]methanone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1LV4 "Create component" 2024-01-11 PDBJ A1LV4 "Initial release" 2025-01-15 RCSB #