data_A1LVE # _chem_comp.id A1LVE _chem_comp.name "(3S,6S)-3-(2-methylpropyl)-6-[(2S)-4-oxidanylbutan-2-yl]piperazine-2,5-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H22 N2 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-12-20 _chem_comp.pdbx_modified_date 2025-05-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 242.315 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1LVE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8XHQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1LVE C02 C1 C 0 1 N N S N N N 50.532 -19.447 46.517 1.001 -1.225 -0.440 C02 A1LVE 1 A1LVE C03 C2 C 0 1 N N N N N N 51.305 -19.228 45.219 -0.178 -1.806 0.281 C03 A1LVE 2 A1LVE C05 C3 C 0 1 N N S N N N 53.484 -20.059 46.277 -1.750 -0.257 -0.791 C05 A1LVE 3 A1LVE C06 C4 C 0 1 N N N N N N 52.565 -20.851 47.211 -0.663 -0.039 -1.799 C06 A1LVE 4 A1LVE C07 C5 C 0 1 N N S N N N 50.529 -18.177 47.385 1.749 -0.280 0.502 C07 A1LVE 5 A1LVE C08 C6 C 0 1 N N N N N N 49.956 -16.998 46.622 2.229 -1.058 1.729 C08 A1LVE 6 A1LVE C09 C7 C 0 1 N N N N N N 49.703 -18.395 48.677 2.954 0.318 -0.227 C09 A1LVE 7 A1LVE C10 C8 C 0 1 N N N N N N 48.226 -18.721 48.343 3.629 1.356 0.671 C10 A1LVE 8 A1LVE C11 C9 C 0 1 N N N N N N 54.170 -18.889 47.017 -1.939 1.023 0.027 C11 A1LVE 9 A1LVE C12 C10 C 0 1 N N N N N N 55.328 -19.384 47.936 -3.105 0.839 0.999 C12 A1LVE 10 A1LVE C13 C11 C 0 1 N N N N N N 56.405 -20.116 47.124 -3.203 2.061 1.915 C13 A1LVE 11 A1LVE C14 C12 C 0 1 N N N N N N 56.009 -18.168 48.597 -4.408 0.687 0.211 C14 A1LVE 12 A1LVE N01 N1 N 0 1 N N N N N N 51.127 -20.527 47.288 0.584 -0.487 -1.625 N01 A1LVE 13 A1LVE N04 N2 N 0 1 N N N N N N 52.727 -19.553 45.152 -1.424 -1.354 0.110 N04 A1LVE 14 A1LVE O15 O1 O 0 1 N N N N N N 53.038 -21.723 47.859 -0.926 0.568 -2.816 O15 A1LVE 15 A1LVE O16 O2 O 0 1 N N N N N N 50.754 -18.801 44.250 0.007 -2.724 1.052 O16 A1LVE 16 A1LVE O17 O3 O 0 1 N N N N N N 48.100 -20.104 48.023 4.755 1.914 -0.009 O17 A1LVE 17 A1LVE H021 H1 H 0 0 N N N N N N 49.491 -19.702 46.268 1.669 -2.033 -0.740 H021 A1LVE 18 A1LVE H051 H2 H 0 0 N N N N N N 54.269 -20.737 45.911 -2.679 -0.488 -1.312 H051 A1LVE 19 A1LVE H071 H3 H 0 0 N N N N N N 51.566 -17.945 47.670 1.081 0.521 0.818 H071 A1LVE 20 A1LVE H081 H4 H 0 0 N N N N N N 49.966 -16.105 47.264 2.762 -0.384 2.400 H081 A1LVE 21 A1LVE H082 H5 H 0 0 N N N N N N 50.565 -16.811 45.725 1.370 -1.483 2.248 H082 A1LVE 22 A1LVE H083 H6 H 0 0 N N N N N N 48.922 -17.223 46.323 2.897 -1.859 1.413 H083 A1LVE 23 A1LVE H091 H7 H 0 0 N N N N N N 50.137 -19.232 49.244 3.664 -0.474 -0.465 H091 A1LVE 24 A1LVE H092 H8 H 0 0 N N N N N N 49.740 -17.480 49.287 2.621 0.796 -1.148 H092 A1LVE 25 A1LVE H101 H9 H 0 0 N N N N N N 47.594 -18.488 49.213 2.919 2.148 0.909 H101 A1LVE 26 A1LVE H102 H10 H 0 0 N N N N N N 47.903 -18.116 47.483 3.962 0.878 1.592 H102 A1LVE 27 A1LVE H112 H11 H 0 0 N N N N N N 54.580 -18.189 46.274 -1.028 1.234 0.587 H112 A1LVE 28 A1LVE H111 H12 H 0 0 N N N N N N 53.422 -18.371 47.635 -2.153 1.854 -0.645 H111 A1LVE 29 A1LVE H121 H13 H 0 0 N N N N N N 54.924 -20.052 48.711 -2.939 -0.054 1.602 H121 A1LVE 30 A1LVE H132 H14 H 0 0 N N N N N N 57.207 -20.453 47.797 -4.067 1.955 2.572 H132 A1LVE 31 A1LVE H131 H15 H 0 0 N N N N N N 55.957 -20.987 46.623 -2.297 2.137 2.517 H131 A1LVE 32 A1LVE H133 H16 H 0 0 N N N N N N 56.823 -19.433 46.369 -3.314 2.961 1.310 H133 A1LVE 33 A1LVE H141 H17 H 0 0 N N N N N N 56.827 -18.513 49.246 -4.338 -0.183 -0.441 H141 A1LVE 34 A1LVE H143 H18 H 0 0 N N N N N N 56.414 -17.506 47.817 -5.239 0.557 0.905 H143 A1LVE 35 A1LVE H142 H19 H 0 0 N N N N N N 55.271 -17.617 49.198 -4.574 1.581 -0.391 H142 A1LVE 36 A1LVE H011 H20 H 0 0 N N N N N N 50.542 -21.069 47.891 1.241 -0.313 -2.318 H011 A1LVE 37 A1LVE H041 H21 H 0 0 N N N N N N 53.203 -19.419 44.283 -2.143 -1.776 0.607 H041 A1LVE 38 A1LVE H171 H22 H 0 0 N N N N N N 47.193 -20.301 47.819 5.233 2.582 0.502 H171 A1LVE 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1LVE N01 C02 SING N N 1 A1LVE N01 C06 SING N N 2 A1LVE C02 C03 SING N N 3 A1LVE C02 C07 SING N N 4 A1LVE C03 N04 SING N N 5 A1LVE C03 O16 DOUB N N 6 A1LVE N04 C05 SING N N 7 A1LVE C05 C06 SING N N 8 A1LVE C05 C11 SING N N 9 A1LVE C06 O15 DOUB N N 10 A1LVE C07 C08 SING N N 11 A1LVE C07 C09 SING N N 12 A1LVE C09 C10 SING N N 13 A1LVE C10 O17 SING N N 14 A1LVE C11 C12 SING N N 15 A1LVE C12 C13 SING N N 16 A1LVE C12 C14 SING N N 17 A1LVE C02 H021 SING N N 18 A1LVE C05 H051 SING N N 19 A1LVE C07 H071 SING N N 20 A1LVE C08 H081 SING N N 21 A1LVE C08 H082 SING N N 22 A1LVE C08 H083 SING N N 23 A1LVE C09 H091 SING N N 24 A1LVE C09 H092 SING N N 25 A1LVE C10 H101 SING N N 26 A1LVE C10 H102 SING N N 27 A1LVE C11 H112 SING N N 28 A1LVE C11 H111 SING N N 29 A1LVE C12 H121 SING N N 30 A1LVE C13 H132 SING N N 31 A1LVE C13 H131 SING N N 32 A1LVE C13 H133 SING N N 33 A1LVE C14 H141 SING N N 34 A1LVE C14 H143 SING N N 35 A1LVE C14 H142 SING N N 36 A1LVE N01 H011 SING N N 37 A1LVE N04 H041 SING N N 38 A1LVE O17 H171 SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1LVE InChI InChI 1.06 "InChI=1S/C12H22N2O3/c1-7(2)6-9-11(16)14-10(12(17)13-9)8(3)4-5-15/h7-10,15H,4-6H2,1-3H3,(H,13,17)(H,14,16)" A1LVE InChIKey InChI 1.06 PBPDVGRYZDBSCX-UHFFFAOYSA-N A1LVE SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@@H]1NC(=O)[C@@H](NC1=O)[C@@H](C)CCO" A1LVE SMILES CACTVS 3.385 "CC(C)C[CH]1NC(=O)[CH](NC1=O)[CH](C)CCO" A1LVE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](CCO)[C@H]1C(=O)N[C@H](C(=O)N1)CC(C)C" A1LVE SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC1C(=O)NC(C(=O)N1)C(C)CCO" # _pdbx_chem_comp_identifier.comp_id A1LVE _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{S},6~{S})-3-(2-methylpropyl)-6-[(2~{S})-4-oxidanylbutan-2-yl]piperazine-2,5-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1LVE "Create component" 2023-12-20 PDBJ A1LVE "Initial release" 2025-05-28 RCSB #