data_A1LVT # _chem_comp.id A1LVT _chem_comp.name "5-amino-2-((6-methoxy-2-methyl-1,2,3,4-tetrahydroisoquinolin-7-yl)amino)-8-(2-(trifluoromethyl)benzyl)pyrido[2,3-d]pyrimidin-7(8H)-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H25 F3 N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-01-05 _chem_comp.pdbx_modified_date 2024-04-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 510.511 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1LVT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8XN7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1LVT C11 C1 C 0 1 Y N N N N N 14.010 -2.782 -6.466 4.909 -1.512 -2.359 C11 A1LVT 1 A1LVT C12 C2 C 0 1 Y N N N N N 12.648 -2.703 -6.661 4.448 -0.678 -3.360 C12 A1LVT 2 A1LVT C13 C3 C 0 1 Y N N N N N 12.055 -1.492 -6.948 3.650 0.405 -3.044 C13 A1LVT 3 A1LVT C14 C4 C 0 1 Y N N N N N 12.824 -0.351 -7.038 3.311 0.654 -1.727 C14 A1LVT 4 A1LVT C17 C5 C 0 1 Y N N N N N 13.176 3.915 -4.823 -0.710 0.166 0.611 C17 A1LVT 5 A1LVT C19 C6 C 0 1 Y N N N N N 13.618 2.746 -2.583 -2.760 -1.070 0.335 C19 A1LVT 6 A1LVT C20 C7 C 0 1 Y N N N N N 13.852 2.966 -1.285 -3.513 -2.103 0.889 C20 A1LVT 7 A1LVT C22 C8 C 0 1 N N N N N N 13.548 4.301 0.587 -3.738 -4.117 2.134 C22 A1LVT 8 A1LVT C24 C9 C 0 1 Y N N N N N 14.351 0.614 -0.999 -5.513 -1.113 -0.003 C24 A1LVT 9 A1LVT C25 C10 C 0 1 N N N N N N 14.736 -0.426 -0.080 -7.012 -1.172 -0.158 C25 A1LVT 10 A1LVT C26 C11 C 0 1 N N N N N N 15.100 -1.733 -0.717 -7.456 -0.251 -1.295 C26 A1LVT 11 A1LVT C29 C12 C 0 1 N N N N N N 14.266 -1.045 -2.828 -5.409 1.022 -1.343 C29 A1LVT 12 A1LVT C30 C13 C 0 1 Y N N N N N 14.127 0.397 -2.231 -4.770 -0.087 -0.549 C30 A1LVT 13 A1LVT C33 C14 C 0 1 Y N N N N N 12.437 5.025 -6.737 -0.844 2.463 0.786 C33 A1LVT 14 A1LVT C34 C15 C 0 1 Y N N N N N 13.043 4.020 -7.510 0.550 2.516 0.830 C34 A1LVT 15 A1LVT C35 C16 C 0 1 N N N N N N 12.983 4.046 -9.038 1.278 3.784 0.949 C35 A1LVT 16 A1LVT C02 C17 C 0 1 N N N N N N 14.327 1.877 -9.100 3.319 2.506 0.907 C02 A1LVT 17 A1LVT C04 C18 C 0 1 N N N N N N 15.060 0.800 -6.937 3.403 0.091 0.710 C04 A1LVT 18 A1LVT C05 C19 C 0 1 Y N N N N N 14.185 -0.434 -6.843 3.772 -0.181 -0.726 C05 A1LVT 19 A1LVT C06 C20 C 0 1 Y N N N N N 14.778 -1.642 -6.559 4.570 -1.264 -1.042 C06 A1LVT 20 A1LVT C07 C21 C 0 1 N N N N N N 16.280 -1.703 -6.348 5.067 -2.177 0.049 C07 A1LVT 21 A1LVT C15 C22 C 0 1 Y N N N N N 13.716 2.965 -6.849 1.281 1.312 0.751 C15 A1LVT 22 A1LVT C23 C23 C 0 1 Y N N N N N 14.219 1.944 -0.466 -4.885 -2.118 0.717 C23 A1LVT 23 A1LVT C28 C24 C 0 1 N N N N N N 14.635 -3.126 -2.269 -7.499 2.088 -1.927 C28 A1LVT 24 A1LVT C31 C25 C 0 1 Y N N N N N 13.738 1.481 -3.091 -3.393 -0.066 -0.379 C31 A1LVT 25 A1LVT C37 C26 C 0 1 N N N N N N 13.623 2.975 -9.811 2.658 3.738 0.984 C37 A1LVT 26 A1LVT F08 F1 F 0 1 N N N N N N 16.920 -1.799 -7.535 5.865 -3.181 -0.510 F08 A1LVT 27 A1LVT F09 F2 F 0 1 N N N N N N 16.701 -0.586 -5.722 5.821 -1.439 0.968 F09 A1LVT 28 A1LVT F10 F3 F 0 1 N N N N N N 16.581 -2.772 -5.582 3.976 -2.759 0.703 F10 A1LVT 29 A1LVT N03 N1 N 0 1 N N N N N N 14.375 1.860 -7.645 2.652 1.345 0.793 N03 A1LVT 30 A1LVT N16 N2 N 0 1 Y N N N N N 13.761 2.952 -5.520 0.615 0.168 0.649 N16 A1LVT 31 A1LVT N18 N3 N 0 1 N N N N N N 13.232 3.894 -3.379 -1.370 -1.043 0.504 N18 A1LVT 32 A1LVT N27 N4 N 0 1 N N N N N N 14.276 -2.069 -1.795 -6.850 1.073 -1.086 N27 A1LVT 33 A1LVT N32 N5 N 0 1 Y N N N N N 12.528 4.938 -5.410 -1.427 1.282 0.678 N32 A1LVT 34 A1LVT N36 N6 N 0 1 N N N N N N 12.301 5.113 -9.733 0.604 4.984 1.023 N36 A1LVT 35 A1LVT O01 O1 O 0 1 N N N N N N 14.843 1.020 -9.716 4.538 2.486 0.939 O01 A1LVT 36 A1LVT O21 O2 O 0 1 N N N N N N 13.720 4.259 -0.790 -2.901 -3.091 1.595 O21 A1LVT 37 A1LVT H111 H1 H 0 0 N N N N N N 14.472 -3.732 -6.242 5.529 -2.361 -2.606 H111 A1LVT 38 A1LVT H121 H2 H 0 0 N N N N N N 12.042 -3.594 -6.589 4.713 -0.872 -4.389 H121 A1LVT 39 A1LVT H131 H3 H 0 0 N N N N N N 10.988 -1.437 -7.102 3.290 1.057 -3.826 H131 A1LVT 40 A1LVT H141 H4 H 0 0 N N N N N N 12.363 0.600 -7.260 2.688 1.500 -1.480 H141 A1LVT 41 A1LVT H222 H5 H 0 0 N N N N N N 13.450 5.347 0.913 -3.126 -4.840 2.672 H222 A1LVT 42 A1LVT H223 H6 H 0 0 N N N N N N 12.639 3.746 0.860 -4.462 -3.673 2.817 H223 A1LVT 43 A1LVT H221 H7 H 0 0 N N N N N N 14.419 3.843 1.079 -4.265 -4.619 1.322 H221 A1LVT 44 A1LVT H252 H8 H 0 0 N N N N N N 13.895 -0.604 0.606 -7.312 -2.195 -0.383 H252 A1LVT 45 A1LVT H251 H9 H 0 0 N N N N N N 15.606 -0.071 0.491 -7.484 -0.852 0.771 H251 A1LVT 46 A1LVT H261 H10 H 0 0 N N N N N N 16.138 -1.670 -1.077 -7.123 -0.660 -2.249 H261 A1LVT 47 A1LVT H262 H11 H 0 0 N N N N N N 15.023 -2.525 0.042 -8.542 -0.165 -1.293 H262 A1LVT 48 A1LVT H291 H12 H 0 0 N N N N N N 15.207 -1.105 -3.395 -4.959 1.973 -1.058 H291 A1LVT 49 A1LVT H292 H13 H 0 0 N N N N N N 13.418 -1.232 -3.504 -5.239 0.848 -2.405 H292 A1LVT 50 A1LVT H331 H14 H 0 0 N N N N N N 11.912 5.845 -7.205 -1.433 3.367 0.841 H331 A1LVT 51 A1LVT H042 H15 H 0 0 N N N N N N 15.308 1.145 -5.922 2.789 -0.726 1.088 H042 A1LVT 52 A1LVT H041 H16 H 0 0 N N N N N N 15.986 0.546 -7.474 4.310 0.170 1.309 H041 A1LVT 53 A1LVT H231 H17 H 0 0 N N N N N N 14.411 2.130 0.580 -5.471 -2.917 1.146 H231 A1LVT 54 A1LVT H282 H18 H 0 0 N N N N N N 13.985 -3.388 -3.117 -7.399 1.809 -2.976 H282 A1LVT 55 A1LVT H283 H19 H 0 0 N N N N N N 15.674 -3.037 -2.618 -8.555 2.154 -1.667 H283 A1LVT 56 A1LVT H281 H20 H 0 0 N N N N N N 14.572 -3.912 -1.502 -7.023 3.055 -1.762 H281 A1LVT 57 A1LVT H311 H21 H 0 0 N N N N N N 13.541 1.297 -4.137 -2.812 0.738 -0.806 H311 A1LVT 58 A1LVT H371 H22 H 0 0 N N N N N N 13.582 2.985 -10.890 3.227 4.651 1.076 H371 A1LVT 59 A1LVT H181 H23 H 0 0 N N N N N N 12.986 4.733 -2.894 -0.870 -1.874 0.546 H181 A1LVT 60 A1LVT H361 H25 H 0 0 N N N N N N 12.365 4.963 -10.720 -0.365 4.999 0.997 H361 A1LVT 61 A1LVT H362 H26 H 0 0 N N N N N N 11.339 5.127 -9.460 1.100 5.814 1.102 H362 A1LVT 62 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1LVT C02 O01 DOUB N N 1 A1LVT N03 C02 SING N N 2 A1LVT C05 C04 SING N N 3 A1LVT C06 C05 DOUB Y N 4 A1LVT F08 C07 SING N N 5 A1LVT F09 C07 SING N N 6 A1LVT F10 C07 SING N N 7 A1LVT C07 C06 SING N N 8 A1LVT C11 C06 SING Y N 9 A1LVT C12 C11 DOUB Y N 10 A1LVT C13 C12 SING Y N 11 A1LVT C14 C13 DOUB Y N 12 A1LVT C04 N03 SING N N 13 A1LVT C15 N03 SING N N 14 A1LVT N16 C15 DOUB Y N 15 A1LVT C17 N16 SING Y N 16 A1LVT C19 N18 SING N N 17 A1LVT C20 C19 DOUB Y N 18 A1LVT C22 O21 SING N N 19 A1LVT O21 C20 SING N N 20 A1LVT C23 C20 SING Y N 21 A1LVT C24 C23 DOUB Y N 22 A1LVT C26 C25 SING N N 23 A1LVT N27 C26 SING N N 24 A1LVT C28 N27 SING N N 25 A1LVT C29 N27 SING N N 26 A1LVT C25 C24 SING N N 27 A1LVT C30 C24 SING Y N 28 A1LVT C31 C30 DOUB Y N 29 A1LVT N18 C17 SING N N 30 A1LVT N32 C17 DOUB Y N 31 A1LVT C33 N32 SING Y N 32 A1LVT C34 C33 DOUB Y N 33 A1LVT C35 C34 SING N N 34 A1LVT N36 C35 SING N N 35 A1LVT C37 C35 DOUB N N 36 A1LVT C02 C37 SING N N 37 A1LVT C05 C14 SING Y N 38 A1LVT C15 C34 SING Y N 39 A1LVT C19 C31 SING Y N 40 A1LVT C29 C30 SING N N 41 A1LVT C11 H111 SING N N 42 A1LVT C12 H121 SING N N 43 A1LVT C13 H131 SING N N 44 A1LVT C14 H141 SING N N 45 A1LVT C22 H222 SING N N 46 A1LVT C22 H223 SING N N 47 A1LVT C22 H221 SING N N 48 A1LVT C25 H252 SING N N 49 A1LVT C25 H251 SING N N 50 A1LVT C26 H261 SING N N 51 A1LVT C26 H262 SING N N 52 A1LVT C29 H291 SING N N 53 A1LVT C29 H292 SING N N 54 A1LVT C33 H331 SING N N 55 A1LVT C04 H042 SING N N 56 A1LVT C04 H041 SING N N 57 A1LVT C23 H231 SING N N 58 A1LVT C28 H282 SING N N 59 A1LVT C28 H283 SING N N 60 A1LVT C28 H281 SING N N 61 A1LVT C31 H311 SING N N 62 A1LVT C37 H371 SING N N 63 A1LVT N18 H181 SING N N 64 A1LVT N36 H361 SING N N 65 A1LVT N36 H362 SING N N 66 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1LVT InChI InChI 1.06 "InChI=1S/C26H25F3N6O2/c1-34-8-7-15-10-22(37-2)21(9-17(15)13-34)32-25-31-12-18-20(30)11-23(36)35(24(18)33-25)14-16-5-3-4-6-19(16)26(27,28)29/h3-6,9-12H,7-8,13-14,30H2,1-2H3,(H,31,32,33)" A1LVT InChIKey InChI 1.06 LQUUWQNDKXYUCK-UHFFFAOYSA-N A1LVT SMILES_CANONICAL CACTVS 3.385 "COc1cc2CCN(C)Cc2cc1Nc3ncc4C(=CC(=O)N(Cc5ccccc5C(F)(F)F)c4n3)N" A1LVT SMILES CACTVS 3.385 "COc1cc2CCN(C)Cc2cc1Nc3ncc4C(=CC(=O)N(Cc5ccccc5C(F)(F)F)c4n3)N" A1LVT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1CCc2cc(c(cc2C1)Nc3ncc4c(n3)N(C(=O)C=C4N)Cc5ccccc5C(F)(F)F)OC" A1LVT SMILES "OpenEye OEToolkits" 2.0.7 "CN1CCc2cc(c(cc2C1)Nc3ncc4c(n3)N(C(=O)C=C4N)Cc5ccccc5C(F)(F)F)OC" # _pdbx_chem_comp_identifier.comp_id A1LVT _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "5-azanyl-2-[(6-methoxy-2-methyl-3,4-dihydro-1~{H}-isoquinolin-7-yl)amino]-8-[[2-(trifluoromethyl)phenyl]methyl]pyrido[2,3-d]pyrimidin-7-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1LVT "Create component" 2024-01-05 PDBJ A1LVT "Modify name" 2024-01-10 PDBJ A1LVT "Initial release" 2024-04-10 RCSB #