data_A1LWB # _chem_comp.id A1LWB _chem_comp.name " 4-farnesyl-3,5-dihydroxy-6-methylphthalide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H32 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "4-methyl-5,7-bis(oxidanyl)-6-[(2~{E},6~{E})-3,7,11-trimethyldodeca-2,6,10-trienyl]-3~{H}-2-benzofuran-1-one" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-01-15 _chem_comp.pdbx_modified_date 2024-08-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 384.508 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1LWB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8XTE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1LWB C7 C1 C 0 1 N N N N N N -14.262 80.524 -3.997 5.551 2.200 0.483 C7 A1LWB 1 A1LWB C8 C2 C 0 1 N N N N N N -16.419 79.702 -3.972 4.874 1.431 -1.553 C8 A1LWB 2 A1LWB C9 C3 C 0 1 N N N N N N -15.963 77.577 0.665 2.067 -2.388 0.406 C9 A1LWB 3 A1LWB O1 O1 O 0 1 N N N N N N -17.538 78.104 -1.602 3.013 -1.001 -1.864 O1 A1LWB 4 A1LWB C1 C4 C 0 1 Y N N N N N -15.441 78.332 -0.544 2.978 -1.193 0.505 C1 A1LWB 5 A1LWB C5 C5 C 0 1 Y N N N N N -15.778 79.314 -2.718 4.258 0.559 -0.545 C5 A1LWB 6 A1LWB C6 C6 C 0 1 Y N N N N N -16.272 78.585 -1.635 3.409 -0.554 -0.646 C6 A1LWB 7 A1LWB C4 C7 C 0 1 Y N N N N N -14.486 79.791 -2.715 4.657 1.008 0.721 C4 A1LWB 8 A1LWB O4 O2 O 0 1 N N N N N N -17.523 79.482 -4.397 4.730 1.313 -2.754 O4 A1LWB 9 A1LWB C3 C8 C 0 1 Y N N N N N -13.642 79.567 -1.646 4.227 0.373 1.846 C3 A1LWB 10 A1LWB O3 O3 O 0 1 N N N N N N -15.524 80.435 -4.693 5.620 2.378 -0.958 O3 A1LWB 11 A1LWB C2 C9 C 0 1 Y N N N N N -14.136 78.837 -0.558 3.385 -0.732 1.749 C2 A1LWB 12 A1LWB C10 C10 C 0 1 N N N N N N -15.731 76.093 0.686 0.632 -1.929 0.425 C10 A1LWB 13 A1LWB C11 C11 C 0 1 N N N N N N -15.297 75.381 1.717 -0.172 -2.249 -0.559 C11 A1LWB 14 A1LWB C12 C12 C 0 1 N N N N N N -15.305 73.880 1.713 -1.632 -1.880 -0.490 C12 A1LWB 15 A1LWB C13 C13 C 0 1 N N N N N N -15.882 73.241 0.466 -1.857 -0.555 -1.221 C13 A1LWB 16 A1LWB C14 C14 C 0 1 N N N N N N -15.855 71.749 0.610 -3.317 -0.186 -1.153 C14 A1LWB 17 A1LWB C15 C15 C 0 1 N N N N N N -14.774 76.013 2.973 0.363 -2.987 -1.759 C15 A1LWB 18 A1LWB C16 C16 C 0 1 N N N N N N -12.230 80.088 -1.640 4.664 0.868 3.200 C16 A1LWB 19 A1LWB C17 C17 C 0 1 N N N N N N -15.226 70.851 -0.142 -3.682 0.937 -0.586 C17 A1LWB 20 A1LWB C18 C18 C 0 1 N N N N N N -15.105 69.421 0.304 -5.120 1.384 -0.658 C18 A1LWB 21 A1LWB C19 C19 C 0 1 N N N N N N -14.604 71.163 -1.471 -2.666 1.781 0.139 C19 A1LWB 22 A1LWB C20 C20 C 0 1 N N N N N N -15.782 68.429 -0.620 -5.859 0.932 0.603 C20 A1LWB 23 A1LWB C21 C21 C 0 1 N N N N N N -15.854 67.055 -0.024 -7.296 1.379 0.530 C21 A1LWB 24 A1LWB C22 C22 C 0 1 N N N N N N -15.226 65.955 -0.412 -8.258 0.491 0.498 C22 A1LWB 25 A1LWB C23 C23 C 0 1 N N N N N N -15.437 64.626 0.250 -7.926 -0.979 0.476 C23 A1LWB 26 A1LWB C24 C24 C 0 1 N N N N N N -14.240 65.941 -1.542 -9.697 0.938 0.482 C24 A1LWB 27 A1LWB O2 O4 O 0 1 N N N N N N -13.313 78.611 0.506 2.961 -1.360 2.874 O2 A1LWB 28 A1LWB H3 H1 H 0 1 N N N N N N -13.999 81.574 -3.803 5.123 3.087 0.950 H3 A1LWB 29 A1LWB H4 H2 H 0 1 N N N N N N -13.462 80.048 -4.582 6.546 2.008 0.885 H4 A1LWB 30 A1LWB H6 H3 H 0 1 N N N N N N -15.481 78.002 1.557 2.265 -2.921 -0.524 H6 A1LWB 31 A1LWB H5 H4 H 0 1 N N N N N N -17.049 77.745 0.720 2.247 -3.053 1.251 H5 A1LWB 32 A1LWB H1 H5 H 0 1 N N N N N N -17.990 78.347 -2.401 2.194 -0.598 -2.184 H1 A1LWB 33 A1LWB H7 H6 H 0 1 N N N N N N -15.938 75.554 -0.227 0.265 -1.336 1.250 H7 A1LWB 34 A1LWB H9 H7 H 0 1 N N N N N N -14.267 73.534 1.823 -2.227 -2.662 -0.962 H9 A1LWB 35 A1LWB H8 H8 H 0 1 N N N N N N -15.898 73.541 2.575 -1.931 -1.776 0.553 H8 A1LWB 36 A1LWB H10 H9 H 0 1 N N N N N N -16.920 73.577 0.329 -1.262 0.226 -0.749 H10 A1LWB 37 A1LWB H11 H10 H 0 1 N N N N N N -15.283 73.536 -0.408 -1.558 -0.660 -2.264 H11 A1LWB 38 A1LWB H12 H11 H 0 1 N N N N N N -16.424 71.349 1.437 -4.061 -0.847 -1.571 H12 A1LWB 39 A1LWB H15 H12 H 0 1 N N N N N N -14.474 75.227 3.682 0.368 -4.057 -1.555 H15 A1LWB 40 A1LWB H13 H13 H 0 1 N N N N N N -13.903 76.641 2.732 -0.271 -2.783 -2.622 H13 A1LWB 41 A1LWB H14 H14 H 0 1 N N N N N N -15.561 76.635 3.426 1.379 -2.652 -1.967 H14 A1LWB 42 A1LWB H17 H15 H 0 1 N N N N N N -11.559 79.336 -2.080 3.951 1.608 3.565 H17 A1LWB 43 A1LWB H18 H16 H 0 1 N N N N N N -12.179 81.015 -2.230 4.706 0.030 3.897 H18 A1LWB 44 A1LWB H16 H17 H 0 1 N N N N N N -11.920 80.295 -0.605 5.651 1.323 3.120 H16 A1LWB 45 A1LWB H20 H18 H 0 1 N N N N N N -14.037 69.166 0.363 -5.158 2.471 -0.732 H20 A1LWB 46 A1LWB H19 H19 H 0 1 N N N N N N -15.559 69.330 1.302 -5.594 0.944 -1.535 H19 A1LWB 47 A1LWB H23 H20 H 0 1 N N N N N N -14.149 70.252 -1.887 -2.155 2.427 -0.575 H23 A1LWB 48 A1LWB H21 H21 H 0 1 N N N N N N -15.377 71.534 -2.160 -3.169 2.394 0.887 H21 A1LWB 49 A1LWB H22 H22 H 0 1 N N N N N N -13.829 71.933 -1.341 -1.939 1.134 0.629 H22 A1LWB 50 A1LWB H24 H23 H 0 1 N N N N N N -16.804 68.779 -0.827 -5.820 -0.155 0.676 H24 A1LWB 51 A1LWB H25 H24 H 0 1 N N N N N N -15.214 68.377 -1.561 -5.385 1.372 1.480 H25 A1LWB 52 A1LWB H26 H25 H 0 1 N N N N N N -16.502 66.948 0.833 -7.533 2.433 0.505 H26 A1LWB 53 A1LWB H29 H26 H 0 1 N N N N N N -14.811 63.867 -0.242 -7.768 -1.331 1.495 H29 A1LWB 54 A1LWB H28 H27 H 0 1 N N N N N N -15.159 64.697 1.312 -8.750 -1.531 0.024 H28 A1LWB 55 A1LWB H27 H28 H 0 1 N N N N N N -16.496 64.339 0.166 -7.019 -1.138 -0.108 H27 A1LWB 56 A1LWB H32 H29 H 0 1 N N N N N N -13.852 64.921 -1.678 -9.739 2.027 0.502 H32 A1LWB 57 A1LWB H30 H30 H 0 1 N N N N N N -14.737 66.270 -2.466 -10.182 0.572 -0.423 H30 A1LWB 58 A1LWB H31 H31 H 0 1 N N N N N N -13.408 66.622 -1.311 -10.211 0.539 1.357 H31 A1LWB 59 A1LWB H2 H32 H 0 1 N N N N N N -12.468 79.015 0.345 3.541 -2.076 3.168 H2 A1LWB 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1LWB C1 C2 DOUB Y N 1 A1LWB C1 C6 SING Y N 2 A1LWB C1 C9 SING N N 3 A1LWB C2 C3 SING Y N 4 A1LWB C2 O2 SING N N 5 A1LWB C3 C4 DOUB Y N 6 A1LWB C3 C16 SING N N 7 A1LWB C4 C5 SING Y N 8 A1LWB C4 C7 SING N N 9 A1LWB C5 C6 DOUB Y N 10 A1LWB C5 C8 SING N N 11 A1LWB C6 O1 SING N N 12 A1LWB C7 O3 SING N N 13 A1LWB O3 C8 SING N N 14 A1LWB C8 O4 DOUB N N 15 A1LWB C9 C10 SING N N 16 A1LWB C10 C11 DOUB N E 17 A1LWB C11 C12 SING N N 18 A1LWB C11 C15 SING N N 19 A1LWB C12 C13 SING N N 20 A1LWB C13 C14 SING N N 21 A1LWB C14 C17 DOUB N E 22 A1LWB C17 C18 SING N N 23 A1LWB C17 C19 SING N N 24 A1LWB C18 C20 SING N N 25 A1LWB C20 C21 SING N N 26 A1LWB C21 C22 DOUB N N 27 A1LWB C22 C23 SING N N 28 A1LWB C22 C24 SING N N 29 A1LWB C7 H3 SING N N 30 A1LWB C7 H4 SING N N 31 A1LWB C9 H6 SING N N 32 A1LWB C9 H5 SING N N 33 A1LWB O1 H1 SING N N 34 A1LWB C10 H7 SING N N 35 A1LWB C12 H9 SING N N 36 A1LWB C12 H8 SING N N 37 A1LWB C13 H10 SING N N 38 A1LWB C13 H11 SING N N 39 A1LWB C14 H12 SING N N 40 A1LWB C15 H15 SING N N 41 A1LWB C15 H13 SING N N 42 A1LWB C15 H14 SING N N 43 A1LWB C16 H17 SING N N 44 A1LWB C16 H18 SING N N 45 A1LWB C16 H16 SING N N 46 A1LWB C18 H20 SING N N 47 A1LWB C18 H19 SING N N 48 A1LWB C19 H23 SING N N 49 A1LWB C19 H21 SING N N 50 A1LWB C19 H22 SING N N 51 A1LWB C20 H24 SING N N 52 A1LWB C20 H25 SING N N 53 A1LWB C21 H26 SING N N 54 A1LWB C23 H29 SING N N 55 A1LWB C23 H28 SING N N 56 A1LWB C23 H27 SING N N 57 A1LWB C24 H32 SING N N 58 A1LWB C24 H30 SING N N 59 A1LWB C24 H31 SING N N 60 A1LWB O2 H2 SING N N 61 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1LWB InChI InChI 1.06 "InChI=1S/C24H32O4/c1-15(2)8-6-9-16(3)10-7-11-17(4)12-13-19-22(25)18(5)20-14-28-24(27)21(20)23(19)26/h8,10,12,25-26H,6-7,9,11,13-14H2,1-5H3" A1LWB InChIKey InChI 1.06 HKULYCOWDDIJCV-UHFFFAOYSA-N A1LWB SMILES_CANONICAL CACTVS 3.385 "CC(C)=CCC/C(C)=C/CC/C(C)=C/Cc1c(O)c(C)c2COC(=O)c2c1O" A1LWB SMILES CACTVS 3.385 "CC(C)=CCCC(C)=CCCC(C)=CCc1c(O)c(C)c2COC(=O)c2c1O" A1LWB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c2c(c(c(c1O)C/C=C(\C)/CC/C=C(\C)/CCC=C(C)C)O)C(=O)OC2" A1LWB SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c2c(c(c(c1O)CC=C(C)CCC=C(C)CCC=C(C)C)O)C(=O)OC2" # _pdbx_chem_comp_identifier.comp_id A1LWB _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-methyl-5,7-bis(oxidanyl)-6-[(2~{E},6~{E})-3,7,11-trimethyldodeca-2,6,10-trienyl]-3~{H}-2-benzofuran-1-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1LWB "Create component" 2024-01-15 PDBJ A1LWB "Initial release" 2024-08-28 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1LWB _pdbx_chem_comp_synonyms.name "4-methyl-5,7-bis(oxidanyl)-6-[(2~{E},6~{E})-3,7,11-trimethyldodeca-2,6,10-trienyl]-3~{H}-2-benzofuran-1-one" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? #