data_A1LWC # _chem_comp.id A1LWC _chem_comp.name 4-farnesyl-3,5-dihydroxy-6-methylphthalide-3C _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H26 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(4~{E},8~{E})-4,8-dimethyl-10-[7-methyl-4,6-bis(oxidanyl)-3-oxidanylidene-1~{H}-2-benzofuran-5-yl]deca-4,8-dienoic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-01-15 _chem_comp.pdbx_modified_date 2024-08-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 374.428 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1LWC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8XTF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1LWC C13 C1 C 0 1 N N N N N N 11.950 -44.261 -8.470 -2.041 -1.171 -1.226 C13 A1LWC 1 A1LWC C15 C2 C 0 1 N N N N N N 8.936 -44.859 -6.119 0.198 -3.644 -1.304 C15 A1LWC 2 A1LWC C17 C3 C 0 1 N N N N N N 13.371 -42.326 -9.279 -3.869 0.430 -0.995 C17 A1LWC 3 A1LWC C19 C4 C 0 1 N N N N N N 12.817 -42.262 -10.668 -2.829 1.514 -0.874 C19 A1LWC 4 A1LWC C20 C5 C 0 1 N N N N N N 15.588 -41.123 -9.704 -5.713 0.768 0.629 C20 A1LWC 5 A1LWC C1 C6 C 0 1 Y N N N N N 7.729 -47.031 -9.484 2.688 -1.142 0.576 C1 A1LWC 6 A1LWC C10 C7 C 0 1 N N N N N N 9.696 -45.866 -8.270 0.463 -2.191 0.641 C10 A1LWC 7 A1LWC C11 C8 C 0 1 N N N N N N 9.867 -44.987 -7.290 -0.340 -2.697 -0.262 C11 A1LWC 8 A1LWC C12 C9 C 0 1 N N N N N N 11.026 -44.035 -7.293 -1.803 -2.333 -0.259 C12 A1LWC 9 A1LWC C14 C10 C 0 1 N N N N N N 13.084 -43.293 -8.417 -3.503 -0.807 -1.223 C14 A1LWC 10 A1LWC C16 C11 C 0 1 N N N N N N 4.292 -45.654 -10.438 4.205 1.227 3.114 C16 A1LWC 11 A1LWC C18 C12 C 0 1 N N N N N N 14.303 -41.212 -8.893 -5.331 0.769 -0.852 C18 A1LWC 12 A1LWC C2 C13 C 0 1 Y N N N N N 6.511 -46.342 -9.450 3.085 -0.583 1.782 C2 A1LWC 13 A1LWC C21 C14 C 0 1 N N N N N N 16.533 -40.018 -9.250 -7.174 1.107 0.772 C21 A1LWC 14 A1LWC C3 C15 C 0 1 Y N N N N N 5.589 -46.419 -10.499 3.777 0.626 1.799 C3 A1LWC 15 A1LWC C4 C16 C 0 1 Y N N N N N 5.910 -47.210 -11.579 4.067 1.266 0.634 C4 A1LWC 16 A1LWC C5 C17 C 0 1 Y N N N N N 7.090 -47.915 -11.628 3.675 0.719 -0.595 C5 A1LWC 17 A1LWC C6 C18 C 0 1 Y N N N N N 8.005 -47.835 -10.583 2.978 -0.499 -0.616 C6 A1LWC 18 A1LWC C7 C19 C 0 1 N N N N N N 5.149 -47.498 -12.830 4.781 2.556 0.312 C7 A1LWC 19 A1LWC C8 C20 C 0 1 N N N N N N 7.142 -48.658 -12.892 4.123 1.624 -1.661 C8 A1LWC 20 A1LWC C9 C21 C 0 1 N N N N N N 8.683 -46.975 -8.304 1.945 -2.453 0.562 C9 A1LWC 21 A1LWC O1 O1 O 0 1 N N N N N N 9.173 -48.512 -10.607 2.591 -1.043 -1.797 O1 A1LWC 22 A1LWC O2 O2 O 0 1 N N N N N N 6.206 -45.545 -8.391 2.799 -1.216 2.947 O2 A1LWC 23 A1LWC O3 O3 O 0 1 N N N N N N 5.968 -48.457 -13.537 4.761 2.684 -1.136 O3 A1LWC 24 A1LWC O4 O4 O 0 1 N N N N N N 7.994 -49.353 -13.380 3.941 1.441 -2.849 O4 A1LWC 25 A1LWC O5 O5 O 0 1 N N N N N N 17.363 -40.296 -8.355 -7.734 1.164 1.990 O5 A1LWC 26 A1LWC O6 O6 O 0 1 N N N N N N 16.426 -38.877 -9.782 -7.842 1.327 -0.211 O6 A1LWC 27 A1LWC H10 H1 H 0 1 N N N N N N 12.344 -45.287 -8.433 -1.451 -0.310 -0.912 H10 A1LWC 28 A1LWC H11 H2 H 0 1 N N N N N N 11.391 -44.117 -9.406 -1.743 -1.469 -2.231 H11 A1LWC 29 A1LWC H15 H3 H 0 1 N N N N N N 9.295 -44.063 -5.450 0.602 -4.531 -0.815 H15 A1LWC 30 A1LWC H13 H4 H 0 1 N N N N N N 7.927 -44.609 -6.479 -0.606 -3.935 -1.980 H13 A1LWC 31 A1LWC H14 H5 H 0 1 N N N N N N 8.904 -45.812 -5.570 0.988 -3.150 -1.870 H14 A1LWC 32 A1LWC H23 H6 H 0 1 N N N N N N 13.206 -41.368 -11.178 -2.452 1.544 0.148 H23 A1LWC 33 A1LWC H22 H7 H 0 1 N N N N N N 13.119 -43.162 -11.225 -2.007 1.306 -1.559 H22 A1LWC 34 A1LWC H21 H8 H 0 1 N N N N N N 11.719 -42.210 -10.623 -3.276 2.476 -1.125 H21 A1LWC 35 A1LWC H24 H9 H 0 1 N N N N N N 16.116 -42.085 -9.622 -5.526 -0.220 1.052 H24 A1LWC 36 A1LWC H25 H10 H 0 1 N N N N N N 15.321 -40.940 -10.755 -5.115 1.509 1.159 H25 A1LWC 37 A1LWC H7 H11 H 0 1 N N N N N N 10.348 -45.775 -9.126 0.063 -1.587 1.441 H7 A1LWC 38 A1LWC H9 H12 H 0 1 N N N N N N 10.639 -43.006 -7.339 -2.101 -2.036 0.746 H9 A1LWC 39 A1LWC H8 H13 H 0 1 N N N N N N 11.598 -44.170 -6.363 -2.392 -3.194 -0.573 H8 A1LWC 40 A1LWC H12 H14 H 0 1 N N N N N N 13.753 -43.391 -7.575 -4.249 -1.566 -1.409 H12 A1LWC 41 A1LWC H16 H15 H 0 1 N N N N N N 4.432 -44.658 -10.882 5.199 0.863 3.373 H16 A1LWC 42 A1LWC H18 H16 H 0 1 N N N N N N 3.518 -46.199 -10.998 4.227 2.313 3.026 H18 A1LWC 43 A1LWC H17 H17 H 0 1 N N N N N N 3.979 -45.547 -9.389 3.498 0.940 3.892 H17 A1LWC 44 A1LWC H20 H18 H 0 1 N N N N N N 13.762 -40.261 -9.010 -5.518 1.756 -1.275 H20 A1LWC 45 A1LWC H19 H19 H 0 1 N N N N N N 14.578 -41.350 -7.837 -5.929 0.028 -1.382 H19 A1LWC 46 A1LWC H3 H20 H 0 1 N N N N N N 4.163 -47.926 -12.596 4.260 3.397 0.770 H3 A1LWC 47 A1LWC H4 H21 H 0 1 N N N N N N 5.019 -46.583 -13.426 5.810 2.513 0.670 H4 A1LWC 48 A1LWC H6 H22 H 0 1 N N N N N N 8.072 -46.889 -7.393 2.171 -2.989 -0.359 H6 A1LWC 49 A1LWC H5 H23 H 0 1 N N N N N N 9.237 -47.925 -8.285 2.253 -3.054 1.417 H5 A1LWC 50 A1LWC H1 H24 H 0 1 N N N N N N 9.660 -48.332 -9.811 1.713 -0.763 -2.090 H1 A1LWC 51 A1LWC H2 H25 H 0 1 N N N N N N 5.350 -45.154 -8.524 3.481 -1.837 3.236 H2 A1LWC 52 A1LWC H26 H26 H 0 1 N N N N N N 17.881 -39.526 -8.152 -8.675 1.386 2.031 H26 A1LWC 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1LWC C1 C2 DOUB Y N 1 A1LWC C2 C3 SING Y N 2 A1LWC C3 C4 DOUB Y N 3 A1LWC C4 C5 SING Y N 4 A1LWC C5 C6 DOUB Y N 5 A1LWC C1 C6 SING Y N 6 A1LWC C6 O1 SING N N 7 A1LWC C2 O2 SING N N 8 A1LWC C4 C7 SING N N 9 A1LWC C7 O3 SING N N 10 A1LWC O3 C8 SING N N 11 A1LWC C5 C8 SING N N 12 A1LWC C8 O4 DOUB N N 13 A1LWC C1 C9 SING N N 14 A1LWC C9 C10 SING N N 15 A1LWC C10 C11 DOUB N Z 16 A1LWC C11 C12 SING N N 17 A1LWC C12 C13 SING N N 18 A1LWC C13 C14 SING N N 19 A1LWC C11 C15 SING N N 20 A1LWC C3 C16 SING N N 21 A1LWC C14 C17 DOUB N E 22 A1LWC C17 C18 SING N N 23 A1LWC C17 C19 SING N N 24 A1LWC C18 C20 SING N N 25 A1LWC C20 C21 SING N N 26 A1LWC C21 O5 SING N N 27 A1LWC C21 O6 DOUB N N 28 A1LWC C13 H10 SING N N 29 A1LWC C13 H11 SING N N 30 A1LWC C15 H15 SING N N 31 A1LWC C15 H13 SING N N 32 A1LWC C15 H14 SING N N 33 A1LWC C19 H23 SING N N 34 A1LWC C19 H22 SING N N 35 A1LWC C19 H21 SING N N 36 A1LWC C20 H24 SING N N 37 A1LWC C20 H25 SING N N 38 A1LWC C10 H7 SING N N 39 A1LWC C12 H9 SING N N 40 A1LWC C12 H8 SING N N 41 A1LWC C14 H12 SING N N 42 A1LWC C16 H16 SING N N 43 A1LWC C16 H18 SING N N 44 A1LWC C16 H17 SING N N 45 A1LWC C18 H20 SING N N 46 A1LWC C18 H19 SING N N 47 A1LWC C7 H3 SING N N 48 A1LWC C7 H4 SING N N 49 A1LWC C9 H6 SING N N 50 A1LWC C9 H5 SING N N 51 A1LWC O1 H1 SING N N 52 A1LWC O2 H2 SING N N 53 A1LWC O5 H26 SING N N 54 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1LWC InChI InChI 1.06 "InChI=1S/C21H26O6/c1-12(5-4-6-13(2)8-10-17(22)23)7-9-15-19(24)14(3)16-11-27-21(26)18(16)20(15)25/h6-7,24-25H,4-5,8-11H2,1-3H3,(H,22,23)" A1LWC InChIKey InChI 1.06 LFMVGCLSSWANEO-UHFFFAOYSA-N A1LWC SMILES_CANONICAL CACTVS 3.385 "C/C(CC\C=C(/C)CCC(O)=O)=C/Cc1c(O)c(C)c2COC(=O)c2c1O" A1LWC SMILES CACTVS 3.385 "CC(CCC=C(C)CCC(O)=O)=CCc1c(O)c(C)c2COC(=O)c2c1O" A1LWC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c2c(c(c(c1O)C/C=C(\C)/CC/C=C(\C)/CCC(=O)O)O)C(=O)OC2" A1LWC SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c2c(c(c(c1O)CC=C(C)CCC=C(C)CCC(=O)O)O)C(=O)OC2" # _pdbx_chem_comp_identifier.comp_id A1LWC _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(4~{E},8~{E})-4,8-dimethyl-10-[7-methyl-4,6-bis(oxidanyl)-3-oxidanylidene-1~{H}-2-benzofuran-5-yl]deca-4,8-dienoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1LWC "Create component" 2024-01-15 PDBJ A1LWC "Initial release" 2024-08-28 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1LWC _pdbx_chem_comp_synonyms.name "(4~{E},8~{E})-4,8-dimethyl-10-[7-methyl-4,6-bis(oxidanyl)-3-oxidanylidene-1~{H}-2-benzofuran-5-yl]deca-4,8-dienoic acid" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? #