data_A1LXB # _chem_comp.id A1LXB _chem_comp.name L-2,4-diketo-3-deoxyfuconate _chem_comp.type non-polymer _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H8 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(2~{S},5~{S})-5-methyl-2-oxidanyl-4-oxidanylidene-oxolane-2-carboxylic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-01-31 _chem_comp.pdbx_modified_date 2024-07-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 160.125 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1LXB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8Y46 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1LXB O4 O1 O 0 1 N N N N N N 39.099 -10.947 19.999 -2.648 -1.410 -0.382 O4 A1LXB 1 A1LXB C4 C1 C 0 1 N N N N N N 37.886 -11.144 19.654 -1.665 -0.729 -0.216 C4 A1LXB 2 A1LXB C3 C2 C 0 1 N N N N N N 37.302 -11.031 18.268 -0.225 -1.070 -0.581 C3 A1LXB 3 A1LXB C5 C3 C 0 1 N N S N N N 36.740 -11.448 20.592 -1.592 0.657 0.396 C5 A1LXB 4 A1LXB C6 C4 C 0 1 N N N N N N 36.709 -12.887 20.966 -2.466 1.624 -0.406 C6 A1LXB 5 A1LXB O5 O2 O 0 1 N N N N N N 35.524 -11.291 19.854 -0.221 1.084 0.346 O5 A1LXB 6 A1LXB C2 C5 C 0 1 N N S N N N 35.765 -11.026 18.489 0.584 -0.118 0.335 C2 A1LXB 7 A1LXB O2 O3 O 0 1 N N N N N N 35.164 -9.777 18.221 0.702 -0.662 1.651 O2 A1LXB 8 A1LXB C1 C6 C 0 1 N N N N N N 35.038 -12.041 17.617 1.944 0.160 -0.252 C1 A1LXB 9 A1LXB O1A O4 O 0 1 N N N N N N 34.373 -11.737 16.654 2.300 1.299 -0.441 O1A A1LXB 10 A1LXB O1B O5 O 0 1 N N N N N N 35.133 -13.266 17.947 2.759 -0.859 -0.567 O1B A1LXB 11 A1LXB H1 H1 H 0 1 N N N N N N 37.602 -11.889 17.649 -0.003 -2.112 -0.349 H1 A1LXB 12 A1LXB H2 H2 H 0 1 N N N N N N 37.628 -10.098 17.784 -0.030 -0.856 -1.632 H2 A1LXB 13 A1LXB H3 H3 H 0 1 N N N N N N 36.775 -10.802 21.482 -1.933 0.622 1.431 H3 A1LXB 14 A1LXB H4 H4 H 0 1 N N N N N N 35.865 -13.071 21.647 -3.499 1.278 -0.391 H4 A1LXB 15 A1LXB H5 H5 H 0 1 N N N N N N 36.589 -13.499 20.060 -2.409 2.618 0.039 H5 A1LXB 16 A1LXB H6 H6 H 0 1 N N N N N N 37.650 -13.156 21.468 -2.111 1.666 -1.436 H6 A1LXB 17 A1LXB H7 H7 H 0 1 N N N N N N 34.557 -9.866 17.495 1.200 -0.105 2.264 H7 A1LXB 18 A1LXB H8 H8 H 0 1 N N N N N N 34.629 -13.797 17.342 3.621 -0.632 -0.941 H8 A1LXB 19 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1LXB O1A C1 DOUB N N 1 A1LXB C1 O1B SING N N 2 A1LXB C1 C2 SING N N 3 A1LXB O2 C2 SING N N 4 A1LXB C3 C2 SING N N 5 A1LXB C3 C4 SING N N 6 A1LXB C2 O5 SING N N 7 A1LXB C4 O4 DOUB N N 8 A1LXB C4 C5 SING N N 9 A1LXB O5 C5 SING N N 10 A1LXB C5 C6 SING N N 11 A1LXB C3 H1 SING N N 12 A1LXB C3 H2 SING N N 13 A1LXB C5 H3 SING N N 14 A1LXB C6 H4 SING N N 15 A1LXB C6 H5 SING N N 16 A1LXB C6 H6 SING N N 17 A1LXB O2 H7 SING N N 18 A1LXB O1B H8 SING N N 19 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1LXB InChI InChI 1.06 "InChI=1S/C6H8O5/c1-3-4(7)2-6(10,11-3)5(8)9/h3,10H,2H2,1H3,(H,8,9)/t3-,6-/m0/s1" A1LXB InChIKey InChI 1.06 RVGZVGXMALCWOM-DZSWIPIPSA-N A1LXB SMILES_CANONICAL CACTVS 3.385 "C[C@@H]1O[C@@](O)(CC1=O)C(O)=O" A1LXB SMILES CACTVS 3.385 "C[CH]1O[C](O)(CC1=O)C(O)=O" A1LXB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1C(=O)C[C@](O1)(C(=O)O)O" A1LXB SMILES "OpenEye OEToolkits" 2.0.7 "CC1C(=O)CC(O1)(C(=O)O)O" # _pdbx_chem_comp_identifier.comp_id A1LXB _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},5~{S})-5-methyl-2-oxidanyl-4-oxidanylidene-oxolane-2-carboxylic acid" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1LXB _pdbx_chem_comp_synonyms.name "(2~{S},5~{S})-5-methyl-2-oxidanyl-4-oxidanylidene-oxolane-2-carboxylic acid" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1LXB "Create component" 2024-01-31 PDBJ A1LXB "Initial release" 2024-07-10 RCSB #