data_A1LXC # _chem_comp.id A1LXC _chem_comp.name "Salvianolic Acid B" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C36 H32 O16" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-01-31 _chem_comp.pdbx_modified_date 2025-11-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 720.630 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1LXC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9LG0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1LXC C1 C1 C 0 1 Y N N N N N 7.494 21.851 34.006 -6.057 2.205 -2.381 C1 A1LXC 1 A1LXC C10 C2 C 0 1 N N R N N N 4.844 25.980 35.225 -4.927 -1.980 0.111 C10 A1LXC 2 A1LXC C11 C3 C 0 1 N N N N N N 3.732 26.961 34.886 -5.023 -3.332 0.770 C11 A1LXC 3 A1LXC C15 C4 C 0 1 N N N N N N 5.719 26.828 37.265 -2.920 -0.957 0.889 C15 A1LXC 4 A1LXC C17 C5 C 0 1 N N N N N N 7.011 27.154 38.011 -2.147 -0.062 1.822 C17 A1LXC 5 A1LXC C18 C6 C 0 1 N N N N N N 6.770 27.609 39.432 -0.679 -0.025 1.393 C18 A1LXC 6 A1LXC C19 C7 C 0 1 Y N N N N N 7.977 27.915 40.327 0.067 0.976 2.238 C19 A1LXC 7 A1LXC C2 C8 C 0 1 Y N N N N N 6.158 21.924 33.671 -6.103 0.995 -3.055 C2 A1LXC 8 A1LXC C20 C9 C 0 1 Y N N N N N 7.834 27.495 41.612 -0.570 1.595 3.299 C20 A1LXC 9 A1LXC C21 C10 C 0 1 Y N N N N N 8.789 27.703 42.531 0.116 2.513 4.072 C21 A1LXC 10 A1LXC C22 C11 C 0 1 Y N N N N N 9.954 28.337 42.190 1.438 2.812 3.791 C22 A1LXC 11 A1LXC C23 C12 C 0 1 Y N N N N N 10.126 28.804 40.722 2.087 2.188 2.723 C23 A1LXC 12 A1LXC C24 C13 C 0 1 Y N N N N N 9.293 28.643 39.910 1.383 1.270 1.956 C24 A1LXC 13 A1LXC C25 C14 C 0 1 N N S N N N 9.611 29.160 38.675 2.328 0.776 0.877 C25 A1LXC 14 A1LXC C26 C15 C 0 1 N N S N N N 10.807 30.064 38.976 3.464 1.824 0.941 C26 A1LXC 15 A1LXC C29 C16 C 0 1 N N N N N N 10.032 28.031 37.633 2.843 -0.599 1.215 C29 A1LXC 16 A1LXC C3 C17 C 0 1 Y N N N N N 5.530 23.158 33.651 -6.191 -0.189 -2.346 C3 A1LXC 17 A1LXC C32 C18 C 0 1 N N R N N N 10.430 25.784 37.269 2.695 -2.978 1.211 C32 A1LXC 18 A1LXC C33 C19 C 0 1 N N N N N N 11.676 25.706 36.397 2.134 -3.304 2.571 C33 A1LXC 19 A1LXC C36 C20 C 0 1 N N N N N N 10.227 24.485 38.057 2.269 -4.055 0.211 C36 A1LXC 20 A1LXC C37 C21 C 0 1 Y N N N N N 11.255 24.364 39.180 2.934 -3.799 -1.117 C37 A1LXC 21 A1LXC C38 C22 C 0 1 Y N N N N N 11.050 24.998 40.399 4.176 -4.345 -1.382 C38 A1LXC 22 A1LXC C39 C23 C 0 1 Y N N N N N 11.993 24.877 41.409 4.790 -4.114 -2.599 C39 A1LXC 23 A1LXC C4 C24 C 0 1 Y N N N N N 6.234 24.306 33.971 -6.236 -0.169 -0.965 C4 A1LXC 24 A1LXC C40 C25 C 0 1 Y N N N N N 13.134 24.117 41.202 4.161 -3.334 -3.556 C40 A1LXC 25 A1LXC C41 C26 C 0 1 Y N N N N N 13.334 23.478 39.988 2.910 -2.786 -3.289 C41 A1LXC 26 A1LXC C42 C27 C 0 1 Y N N N N N 12.396 23.601 38.974 2.298 -3.025 -2.069 C42 A1LXC 27 A1LXC C45 C28 C 0 1 Y N N N N N 10.331 31.373 39.244 3.219 2.938 -0.044 C45 A1LXC 28 A1LXC C46 C29 C 0 1 Y N N N N N 10.392 31.909 40.528 3.800 2.890 -1.298 C46 A1LXC 29 A1LXC C47 C30 C 0 1 Y N N N N N 9.902 33.185 40.783 3.575 3.913 -2.205 C47 A1LXC 30 A1LXC C48 C31 C 0 1 Y N N N N N 9.341 33.935 39.755 2.765 4.988 -1.850 C48 A1LXC 31 A1LXC C49 C32 C 0 1 Y N N N N N 9.272 33.398 38.474 2.187 5.030 -0.592 C49 A1LXC 32 A1LXC C5 C33 C 0 1 Y N N N N N 7.582 24.244 34.310 -6.191 1.035 -0.286 C5 A1LXC 33 A1LXC C50 C34 C 0 1 Y N N N N N 9.764 32.123 38.219 2.410 4.003 0.306 C50 A1LXC 34 A1LXC C6 C35 C 0 1 Y N N N N N 8.205 22.996 34.327 -6.096 2.224 -0.990 C6 A1LXC 35 A1LXC C9 C36 C 0 1 N N N N N N 5.482 25.631 33.903 -6.334 -1.462 -0.197 C9 A1LXC 36 A1LXC O12 O1 O 0 1 N N N N N N 2.807 26.652 34.069 -4.620 -3.484 1.898 O12 A1LXC 37 A1LXC O13 O2 O 0 1 N N N N N N 3.759 28.075 35.452 -5.556 -4.367 0.102 O13 A1LXC 38 A1LXC O14 O3 O 0 1 N N N N N N 5.810 26.724 35.884 -4.254 -1.053 1.003 O14 A1LXC 39 A1LXC O16 O4 O 0 1 N N N N N N 4.687 26.657 37.829 -2.340 -1.589 0.039 O16 A1LXC 40 A1LXC O27 O5 O 0 1 N N N N N N 11.372 29.503 40.310 3.370 2.318 2.284 O27 A1LXC 41 A1LXC O28 O6 O 0 1 N N N N N N 10.981 28.576 43.112 2.106 3.716 4.556 O28 A1LXC 42 A1LXC O30 O7 O 0 1 N N N N N N 9.880 28.186 36.460 3.843 -0.722 1.882 O30 A1LXC 43 A1LXC O31 O8 O 0 1 N N N N N N 10.566 26.858 38.150 2.191 -1.687 0.776 O31 A1LXC 44 A1LXC O34 O9 O 0 1 N N N N N N 12.584 26.564 36.522 2.542 -4.407 3.218 O34 A1LXC 45 A1LXC O35 O10 O 0 1 N N N N N N 11.789 24.788 35.541 1.316 -2.573 3.078 O35 A1LXC 46 A1LXC O43 O11 O 0 1 N N N N N N 14.092 23.976 42.214 4.764 -3.106 -4.753 O43 A1LXC 47 A1LXC O44 O12 O 0 1 N N N N N N 14.493 22.716 39.790 2.288 -2.020 -4.225 O44 A1LXC 48 A1LXC O51 O13 O 0 1 N N N N N N 9.964 33.745 42.069 4.146 3.868 -3.438 O51 A1LXC 49 A1LXC O52 O14 O 0 1 N N N N N N 8.847 35.228 40.018 2.542 5.995 -2.736 O52 A1LXC 50 A1LXC O7 O15 O 0 1 N N N N N N 9.558 22.872 34.668 -6.046 3.409 -0.324 O7 A1LXC 51 A1LXC O8 O16 O 0 1 N N N N N N 8.130 20.601 34.023 -5.970 3.370 -3.077 O8 A1LXC 52 A1LXC H1 H1 H 0 1 N N N N N N 4.481 25.098 35.772 -4.361 -2.067 -0.817 H1 A1LXC 53 A1LXC H2 H2 H 0 1 N N N N N N 7.641 26.252 38.033 -2.562 0.946 1.785 H2 A1LXC 54 A1LXC H3 H3 H 0 1 N N N N N N 7.536 27.955 37.470 -2.218 -0.447 2.839 H3 A1LXC 55 A1LXC H4 H4 H 0 1 N N N N N N 6.166 28.527 39.379 -0.237 -1.012 1.525 H4 A1LXC 56 A1LXC H5 H5 H 0 1 N N N N N N 6.191 26.818 39.930 -0.614 0.265 0.344 H5 A1LXC 57 A1LXC H6 H6 H 0 1 N N N N N N 5.607 21.028 33.427 -6.069 0.976 -4.135 H6 A1LXC 58 A1LXC H7 H7 H 0 1 N N N N N N 6.929 26.981 41.900 -1.601 1.362 3.523 H7 A1LXC 59 A1LXC H8 H8 H 0 1 N N N N N N 8.638 27.368 43.547 -0.381 2.999 4.898 H8 A1LXC 60 A1LXC H9 H9 H 0 1 N N N N N N 8.790 29.755 38.249 1.848 0.780 -0.102 H9 A1LXC 61 A1LXC H10 H10 H 0 1 N N N N N N 11.559 30.026 38.174 4.431 1.355 0.760 H10 A1LXC 62 A1LXC H11 H11 H 0 1 N N N N N N 4.486 23.225 33.384 -6.227 -1.131 -2.873 H11 A1LXC 63 A1LXC H12 H12 H 0 1 N N N N N N 9.557 25.934 36.617 3.783 -2.943 1.265 H12 A1LXC 64 A1LXC H13 H13 H 0 1 N N N N N N 9.216 24.481 38.492 2.566 -5.035 0.584 H13 A1LXC 65 A1LXC H14 H14 H 0 1 N N N N N N 10.336 23.629 37.375 1.186 -4.027 0.087 H14 A1LXC 66 A1LXC H15 H15 H 0 1 N N N N N N 10.157 25.584 40.560 4.668 -4.952 -0.637 H15 A1LXC 67 A1LXC H16 H16 H 0 1 N N N N N N 11.839 25.374 42.355 5.761 -4.541 -2.803 H16 A1LXC 68 A1LXC H17 H17 H 0 1 N N N N N N 12.553 23.105 38.028 1.325 -2.604 -1.861 H17 A1LXC 69 A1LXC H18 H18 H 0 1 N N N N N N 10.823 31.330 41.331 4.428 2.055 -1.570 H18 A1LXC 70 A1LXC H19 H19 H 0 1 N N N N N N 8.834 33.975 37.673 1.558 5.863 -0.314 H19 A1LXC 71 A1LXC H20 H20 H 0 1 N N N N N N 8.133 25.140 34.554 -6.227 1.048 0.794 H20 A1LXC 72 A1LXC H21 H21 H 0 1 N N N N N N 9.706 31.713 37.221 1.959 4.036 1.287 H21 A1LXC 73 A1LXC H22 H22 H 0 1 N N N N N N 6.188 26.428 33.627 -6.870 -2.199 -0.794 H22 A1LXC 74 A1LXC H23 H23 H 0 1 N N N N N N 4.696 25.556 33.137 -6.870 -1.290 0.737 H23 A1LXC 75 A1LXC H24 H24 H 0 1 N N N N N N 3.014 28.592 35.170 -5.596 -5.215 0.566 H24 A1LXC 76 A1LXC H25 H25 H 0 1 N N N N N N 10.730 28.234 43.962 2.561 3.328 5.316 H25 A1LXC 77 A1LXC H26 H26 H 0 1 N N N N N N 13.281 26.381 35.903 2.153 -4.574 4.088 H26 A1LXC 78 A1LXC H27 H27 H 0 1 N N N N N N 13.819 24.467 42.980 4.551 -3.761 -5.432 H27 A1LXC 79 A1LXC H28 H28 H 0 1 N N N N N N 15.024 22.736 40.577 1.721 -2.519 -4.828 H28 A1LXC 80 A1LXC H29 H29 H 0 1 N N N N N N 10.368 33.126 42.665 3.604 3.424 -4.106 H29 A1LXC 81 A1LXC H30 H30 H 0 1 N N N N N N 8.973 35.435 40.937 1.771 5.856 -3.304 H30 A1LXC 82 A1LXC H31 H31 H 0 1 N N N N N N 9.916 23.730 34.863 -6.913 3.803 -0.156 H31 A1LXC 83 A1LXC H32 H32 H 0 1 N N N N N N 9.041 20.712 34.270 -5.063 3.656 -3.253 H32 A1LXC 84 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1LXC C3 C2 DOUB Y N 1 A1LXC C3 C4 SING Y N 2 A1LXC C2 C1 SING Y N 3 A1LXC C9 C4 SING N N 4 A1LXC C9 C10 SING N N 5 A1LXC C4 C5 DOUB Y N 6 A1LXC C1 O8 SING N N 7 A1LXC C1 C6 DOUB Y N 8 A1LXC O12 C11 DOUB N N 9 A1LXC C5 C6 SING Y N 10 A1LXC C6 O7 SING N N 11 A1LXC C11 C10 SING N N 12 A1LXC C11 O13 SING N N 13 A1LXC C10 O14 SING N N 14 A1LXC O35 C33 DOUB N N 15 A1LXC O14 C15 SING N N 16 A1LXC C33 O34 SING N N 17 A1LXC C33 C32 SING N N 18 A1LXC O30 C29 DOUB N N 19 A1LXC C15 O16 DOUB N N 20 A1LXC C15 C17 SING N N 21 A1LXC C32 C36 SING N N 22 A1LXC C32 O31 SING N N 23 A1LXC C29 O31 SING N N 24 A1LXC C29 C25 SING N N 25 A1LXC C17 C18 SING N N 26 A1LXC C36 C37 SING N N 27 A1LXC C50 C49 DOUB Y N 28 A1LXC C50 C45 SING Y N 29 A1LXC C49 C48 SING Y N 30 A1LXC C25 C26 SING N N 31 A1LXC C25 C24 SING N N 32 A1LXC C42 C37 DOUB Y N 33 A1LXC C42 C41 SING Y N 34 A1LXC C26 C45 SING N N 35 A1LXC C26 O27 SING N N 36 A1LXC C37 C38 SING Y N 37 A1LXC C45 C46 DOUB Y N 38 A1LXC C18 C19 SING N N 39 A1LXC C48 O52 SING N N 40 A1LXC C48 C47 DOUB Y N 41 A1LXC O44 C41 SING N N 42 A1LXC C24 C19 DOUB Y N 43 A1LXC C24 C23 SING Y N 44 A1LXC C41 C40 DOUB Y N 45 A1LXC O27 C23 SING N N 46 A1LXC C19 C20 SING Y N 47 A1LXC C38 C39 DOUB Y N 48 A1LXC C46 C47 SING Y N 49 A1LXC C23 C22 DOUB Y N 50 A1LXC C47 O51 SING N N 51 A1LXC C40 C39 SING Y N 52 A1LXC C40 O43 SING N N 53 A1LXC C20 C21 DOUB Y N 54 A1LXC C22 C21 SING Y N 55 A1LXC C22 O28 SING N N 56 A1LXC C10 H1 SING N N 57 A1LXC C17 H2 SING N N 58 A1LXC C17 H3 SING N N 59 A1LXC C18 H4 SING N N 60 A1LXC C18 H5 SING N N 61 A1LXC C2 H6 SING N N 62 A1LXC C20 H7 SING N N 63 A1LXC C21 H8 SING N N 64 A1LXC C25 H9 SING N N 65 A1LXC C26 H10 SING N N 66 A1LXC C3 H11 SING N N 67 A1LXC C32 H12 SING N N 68 A1LXC C36 H13 SING N N 69 A1LXC C36 H14 SING N N 70 A1LXC C38 H15 SING N N 71 A1LXC C39 H16 SING N N 72 A1LXC C42 H17 SING N N 73 A1LXC C46 H18 SING N N 74 A1LXC C49 H19 SING N N 75 A1LXC C5 H20 SING N N 76 A1LXC C50 H21 SING N N 77 A1LXC C9 H22 SING N N 78 A1LXC C9 H23 SING N N 79 A1LXC O13 H24 SING N N 80 A1LXC O28 H25 SING N N 81 A1LXC O34 H26 SING N N 82 A1LXC O43 H27 SING N N 83 A1LXC O44 H28 SING N N 84 A1LXC O51 H29 SING N N 85 A1LXC O52 H30 SING N N 86 A1LXC O7 H31 SING N N 87 A1LXC O8 H32 SING N N 88 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1LXC InChI InChI 1.06 "InChI=1S/C36H32O16/c37-20-6-1-16(11-24(20)41)13-27(34(45)46)50-29(44)10-5-18-3-9-23(40)33-30(18)31(32(52-33)19-4-8-22(39)26(43)15-19)36(49)51-28(35(47)48)14-17-2-7-21(38)25(42)12-17/h1-4,6-9,11-12,15,27-28,31-32,37-43H,5,10,13-14H2,(H,45,46)(H,47,48)/t27-,28-,31+,32-/m1/s1" A1LXC InChIKey InChI 1.06 JUFYZLWTPPZFMH-MZBUKOFNSA-N A1LXC SMILES_CANONICAL CACTVS 3.385 "OC(=O)[C@@H](Cc1ccc(O)c(O)c1)OC(=O)CCc2ccc(O)c3O[C@@H]([C@@H](C(=O)O[C@H](Cc4ccc(O)c(O)c4)C(O)=O)c23)c5ccc(O)c(O)c5" A1LXC SMILES CACTVS 3.385 "OC(=O)[CH](Cc1ccc(O)c(O)c1)OC(=O)CCc2ccc(O)c3O[CH]([CH](C(=O)O[CH](Cc4ccc(O)c(O)c4)C(O)=O)c23)c5ccc(O)c(O)c5" A1LXC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1C[C@H](C(=O)O)OC(=O)CCc2ccc(c3c2[C@@H]([C@H](O3)c4ccc(c(c4)O)O)C(=O)O[C@H](Cc5ccc(c(c5)O)O)C(=O)O)O)O)O" A1LXC SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1CC(C(=O)O)OC(=O)CCc2ccc(c3c2C(C(O3)c4ccc(c(c4)O)O)C(=O)OC(Cc5ccc(c(c5)O)O)C(=O)O)O)O)O" # _pdbx_chem_comp_identifier.comp_id A1LXC _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R})-3-[3,4-bis(oxidanyl)phenyl]-2-[3-[(2~{S},3~{S})-2-[3,4-bis(oxidanyl)phenyl]-3-[(2~{R})-3-[3,4-bis(oxidanyl)phenyl]-1-oxidanyl-1-oxidanylidene-propan-2-yl]oxycarbonyl-7-oxidanyl-2,3-dihydro-1-benzofuran-4-yl]propanoyloxy]propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1LXC "Create component" 2024-01-31 PDBJ A1LXC "Modify coordinates" 2025-09-23 RCSB A1LXC "Initial release" 2025-10-01 RCSB A1LXC "Modify name" 2025-11-12 PDBC A1LXC "Modify coordinates" 2025-11-12 PDBC A1LXC "Other modification" 2025-11-12 PDBC #