data_A1LYN # _chem_comp.id A1LYN _chem_comp.name "(2S)-decane-1,2,10-triol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H22 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-02-25 _chem_comp.pdbx_modified_date 2024-08-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 190.280 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1LYN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8YD3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1LYN C1 C1 C 0 1 N N S N N N 32.902 248.911 6.592 4.008 -0.129 -0.221 C1 A1LYN 1 A1LYN C2 C2 C 0 1 N N N N N N 32.432 247.931 7.662 5.225 0.743 0.098 C2 A1LYN 2 A1LYN C3 C3 C 0 1 N N N N N N 38.476 249.575 7.568 -2.262 0.435 0.186 C3 A1LYN 3 A1LYN C4 C4 C 0 1 N N N N N N 37.288 248.911 6.883 -0.986 -0.296 -0.237 C4 A1LYN 4 A1LYN O1 O1 O 0 1 N N N N N N 31.126 247.432 7.340 6.406 0.112 -0.401 O1 A1LYN 5 A1LYN O2 O2 O 0 1 N N N N N N 32.661 250.266 7.010 4.107 -1.364 0.491 O2 A1LYN 6 A1LYN C10 C5 C 0 1 N N N N N N 40.159 247.914 10.518 -5.980 -0.463 -0.253 C10 A1LYN 7 A1LYN C5 C6 C 0 1 N N N N N N 36.550 249.955 6.063 0.235 0.518 0.194 C5 A1LYN 8 A1LYN C6 C7 C 0 1 N N N N N N 35.112 250.069 6.532 1.511 -0.213 -0.229 C6 A1LYN 9 A1LYN C7 C8 C 0 1 N N N N N N 34.398 248.732 6.359 2.732 0.602 0.202 C7 A1LYN 10 A1LYN C8 C9 C 0 1 N N N N N N 38.567 249.200 9.039 -3.483 -0.380 -0.245 C8 A1LYN 11 A1LYN C9 C10 C 0 1 N N N N N N 39.310 247.885 9.244 -4.759 0.351 0.178 C9 A1LYN 12 A1LYN O11 O3 O 0 1 N N N N N N 39.498 248.611 11.586 -7.172 0.219 0.142 O11 A1LYN 13 A1LYN H1 H1 H 0 1 N N N N N N 32.366 248.702 5.655 3.974 -0.328 -1.292 H1 A1LYN 14 A1LYN H2 H2 H 0 1 N N N N N N 33.138 247.090 7.719 5.106 1.718 -0.373 H2 A1LYN 15 A1LYN H3 H3 H 0 1 N N N N N N 32.395 248.445 8.634 5.308 0.868 1.178 H3 A1LYN 16 A1LYN H4 H4 H 0 1 N N N N N N 39.400 249.258 7.063 -2.270 0.555 1.269 H4 A1LYN 17 A1LYN H5 H5 H 0 1 N N N N N N 38.369 250.667 7.486 -2.293 1.415 -0.289 H5 A1LYN 18 A1LYN H6 H6 H 0 1 N N N N N N 36.611 248.491 7.642 -0.955 -1.277 0.238 H6 A1LYN 19 A1LYN H7 H7 H 0 1 N N N N N N 37.644 248.106 6.223 -0.979 -0.417 -1.320 H7 A1LYN 20 A1LYN H8 H8 H 0 1 N N N N N N 30.844 246.823 8.013 7.218 0.610 -0.235 H8 A1LYN 21 A1LYN H9 H9 H 0 1 N N N N N N 31.731 250.391 7.159 4.142 -1.263 1.452 H9 A1LYN 22 A1LYN H10 H10 H 0 1 N N N N N N 40.357 246.880 10.837 -5.973 -0.584 -1.336 H10 A1LYN 23 A1LYN H11 H11 H 0 1 N N N N N N 41.111 248.419 10.299 -5.949 -1.444 0.222 H11 A1LYN 24 A1LYN H12 H12 H 0 1 N N N N N N 36.564 249.661 5.003 0.204 1.499 -0.281 H12 A1LYN 25 A1LYN H13 H13 H 0 1 N N N N N N 37.049 250.928 6.180 0.228 0.639 1.277 H13 A1LYN 26 A1LYN H14 H14 H 0 1 N N N N N N 35.097 250.355 7.594 1.542 -1.193 0.246 H14 A1LYN 27 A1LYN H15 H15 H 0 1 N N N N N N 34.595 250.837 5.938 1.518 -0.333 -1.312 H15 A1LYN 28 A1LYN H16 H16 H 0 1 N N N N N N 34.566 248.358 5.338 2.724 0.723 1.285 H16 A1LYN 29 A1LYN H17 H17 H 0 1 N N N N N N 34.797 248.009 7.085 2.701 1.583 -0.273 H17 A1LYN 30 A1LYN H18 H18 H 0 1 N N N N N N 39.100 249.998 9.577 -3.476 -0.501 -1.328 H18 A1LYN 31 A1LYN H19 H19 H 0 1 N N N N N N 37.549 249.101 9.445 -3.452 -1.360 0.230 H19 A1LYN 32 A1LYN H20 H20 H 0 1 N N N N N N 38.577 247.068 9.321 -4.790 1.332 -0.297 H20 A1LYN 33 A1LYN H21 H21 H 0 1 N N N N N N 39.967 247.707 8.380 -4.767 0.472 1.261 H21 A1LYN 34 A1LYN H22 H22 H 0 1 N N N N N N 40.053 248.609 12.357 -7.987 -0.241 -0.100 H22 A1LYN 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1LYN C5 C6 SING N N 1 A1LYN C5 C4 SING N N 2 A1LYN C7 C6 SING N N 3 A1LYN C7 C1 SING N N 4 A1LYN C1 O2 SING N N 5 A1LYN C1 C2 SING N N 6 A1LYN C4 C3 SING N N 7 A1LYN O1 C2 SING N N 8 A1LYN C3 C8 SING N N 9 A1LYN C8 C9 SING N N 10 A1LYN C9 C10 SING N N 11 A1LYN C10 O11 SING N N 12 A1LYN C1 H1 SING N N 13 A1LYN C2 H2 SING N N 14 A1LYN C2 H3 SING N N 15 A1LYN C3 H4 SING N N 16 A1LYN C3 H5 SING N N 17 A1LYN C4 H6 SING N N 18 A1LYN C4 H7 SING N N 19 A1LYN O1 H8 SING N N 20 A1LYN O2 H9 SING N N 21 A1LYN C10 H10 SING N N 22 A1LYN C10 H11 SING N N 23 A1LYN C5 H12 SING N N 24 A1LYN C5 H13 SING N N 25 A1LYN C6 H14 SING N N 26 A1LYN C6 H15 SING N N 27 A1LYN C7 H16 SING N N 28 A1LYN C7 H17 SING N N 29 A1LYN C8 H18 SING N N 30 A1LYN C8 H19 SING N N 31 A1LYN C9 H20 SING N N 32 A1LYN C9 H21 SING N N 33 A1LYN O11 H22 SING N N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1LYN InChI InChI 1.06 "InChI=1S/C10H22O3/c11-8-6-4-2-1-3-5-7-10(13)9-12/h10-13H,1-9H2/t10-/m0/s1" A1LYN InChIKey InChI 1.06 RHINSRUDDXGHLV-JTQLQIEISA-N A1LYN SMILES_CANONICAL CACTVS 3.385 "OCCCCCCCC[C@H](O)CO" A1LYN SMILES CACTVS 3.385 "OCCCCCCCC[CH](O)CO" A1LYN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C(CCCCO)CCC[C@@H](CO)O" A1LYN SMILES "OpenEye OEToolkits" 2.0.7 "C(CCCCO)CCCC(CO)O" # _pdbx_chem_comp_identifier.comp_id A1LYN _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-decane-1,2,10-triol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1LYN "Create component" 2024-02-25 PDBJ A1LYN "Initial release" 2024-08-21 RCSB #