data_A1LZ6 # _chem_comp.id A1LZ6 _chem_comp.name "2-methyl-~{N}-[1-(1-methyl-2-oxidanylidene-benzo[cd]indol-6-yl)cyclopropyl]-5-[3-(4-methyl-4-oxidanyl-piperidin-1-yl)azetidin-1-yl]benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H36 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-03 _chem_comp.pdbx_modified_date 2024-11-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 524.653 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1LZ6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8YX4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1LZ6 C10 C1 C 0 1 Y N N N N N 54.049 27.836 -2.267 5.562 -1.738 -1.338 C10 A1LZ6 1 A1LZ6 C11 C2 C 0 1 Y N N N N N 54.966 28.648 -1.524 4.718 -2.745 -1.772 C11 A1LZ6 2 A1LZ6 C19 C3 C 0 1 N N N N N N 50.879 28.235 2.355 2.395 -0.384 3.767 C19 A1LZ6 3 A1LZ6 C12 C4 C 0 1 Y N N N N N 54.513 29.290 -0.339 3.497 -2.949 -1.131 C12 A1LZ6 4 A1LZ6 C13 C5 C 0 1 Y N N N N N 53.146 29.098 0.117 3.073 -2.193 -0.070 C13 A1LZ6 5 A1LZ6 C14 C6 C 0 1 Y N N N N N 52.262 28.264 -0.684 3.901 -1.160 0.402 C14 A1LZ6 6 A1LZ6 C18 C7 C 0 1 N N N N N N 52.566 25.578 -4.916 8.328 0.681 -0.817 C18 A1LZ6 7 A1LZ6 C20 C8 C 0 1 N N N N N N 49.391 28.012 2.052 2.109 -1.709 3.058 C20 A1LZ6 8 A1LZ6 C21 C9 C 0 1 Y N N N N N 48.925 32.177 0.154 0.081 1.889 0.226 C21 A1LZ6 9 A1LZ6 C22 C10 C 0 1 Y N N N N N 47.714 32.566 0.755 0.204 3.071 -0.506 C22 A1LZ6 10 A1LZ6 C23 C11 C 0 1 Y N N N N N 47.356 33.905 0.873 -0.906 3.630 -1.106 C23 A1LZ6 11 A1LZ6 C24 C12 C 0 1 Y N N N N N 48.289 34.833 0.383 -2.142 3.023 -0.986 C24 A1LZ6 12 A1LZ6 C25 C13 C 0 1 Y N N N N N 49.490 34.439 -0.233 -2.275 1.845 -0.259 C25 A1LZ6 13 A1LZ6 C27 C14 C 0 1 N N N N N N 50.603 36.871 -0.320 -4.141 1.020 -1.468 C27 A1LZ6 14 A1LZ6 C28 C15 C 0 1 N N N N N N 52.089 36.581 -0.439 -4.557 -0.365 -0.940 C28 A1LZ6 15 A1LZ6 C29 C16 C 0 1 N N N N N N 51.753 35.476 -1.413 -3.388 -0.228 0.053 C29 A1LZ6 16 A1LZ6 C36 C17 C 0 1 N N N N N N 52.740 38.430 0.325 -6.911 0.130 -1.213 C36 A1LZ6 17 A1LZ6 C33 C18 C 0 1 N N N N N N 55.203 38.895 0.014 -8.641 -1.147 0.057 C33 A1LZ6 18 A1LZ6 C31 C19 C 0 1 N N N N N N 54.231 36.879 -0.900 -6.216 -1.727 0.180 C31 A1LZ6 19 A1LZ6 C32 C20 C 0 1 N N N N N N 55.299 37.451 -0.054 -7.528 -1.677 0.965 C32 A1LZ6 20 A1LZ6 C35 C21 C 0 1 N N N N N N 53.897 39.396 0.583 -8.245 0.235 -0.469 C35 A1LZ6 21 A1LZ6 C02 C22 C 0 1 N N N N N N 49.159 30.649 0.076 1.269 1.288 0.870 C02 A1LZ6 22 A1LZ6 C04 C23 C 0 1 N N N N N N 50.305 28.613 0.957 2.319 -0.432 2.240 C04 A1LZ6 23 A1LZ6 C05 C24 C 0 1 Y N N N N N 50.881 28.033 -0.336 3.610 -0.300 1.474 C05 A1LZ6 24 A1LZ6 C06 C25 C 0 1 Y N N N N N 50.088 27.177 -1.200 4.527 0.660 1.809 C06 A1LZ6 25 A1LZ6 C07 C26 C 0 1 Y N N N N N 50.606 26.575 -2.381 5.737 0.828 1.137 C07 A1LZ6 26 A1LZ6 C08 C27 C 0 1 Y N N N N N 51.949 26.847 -2.706 6.060 0.002 0.076 C08 A1LZ6 27 A1LZ6 C09 C28 C 0 1 Y N N N N N 52.704 27.690 -1.831 5.119 -0.969 -0.252 C09 A1LZ6 28 A1LZ6 C15 C29 C 0 1 N N N N N N 54.126 27.026 -3.536 6.870 -1.165 -1.676 C15 A1LZ6 29 A1LZ6 C37 C30 C 0 1 N N N N N N 55.264 39.520 -1.422 -9.944 -1.038 0.852 C37 A1LZ6 30 A1LZ6 C38 C31 C 0 1 Y N N N N N 49.847 33.091 -0.350 -1.167 1.279 0.352 C38 A1LZ6 31 A1LZ6 C39 C32 C 0 1 N N N N N N 46.790 31.447 1.261 1.549 3.738 -0.639 C39 A1LZ6 32 A1LZ6 N03 N1 N 0 1 N N N N N N 50.173 30.075 0.948 1.142 0.163 1.602 N03 A1LZ6 33 A1LZ6 N17 N2 N 0 1 N N N N N N 52.881 26.448 -3.802 7.119 -0.147 -0.810 N17 A1LZ6 34 A1LZ6 N26 N3 N 0 1 N N N N N N 50.401 35.458 -0.731 -3.526 1.236 -0.140 N26 A1LZ6 35 A1LZ6 N30 N4 N 0 1 N N N N N N 52.928 37.439 -0.678 -5.880 -0.381 -0.301 N30 A1LZ6 36 A1LZ6 O01 O1 O 0 1 N N N N N N 48.478 29.957 -0.640 2.360 1.808 0.739 O01 A1LZ6 37 A1LZ6 O16 O2 O 0 1 N N N N N N 55.083 26.933 -4.167 7.606 -1.540 -2.569 O16 A1LZ6 38 A1LZ6 O34 O3 O 0 1 N N N N N N 56.255 39.457 0.732 -8.826 -2.041 -1.043 O34 A1LZ6 39 A1LZ6 H1 H1 H 0 1 N N N N N N 55.985 28.771 -1.859 5.004 -3.371 -2.605 H1 A1LZ6 40 A1LZ6 H2 H2 H 0 1 N N N N N N 51.555 27.373 2.457 1.569 0.091 4.297 H2 A1LZ6 41 A1LZ6 H3 H3 H 0 1 N N N N N N 51.185 29.026 3.056 3.379 -0.256 4.219 H3 A1LZ6 42 A1LZ6 H4 H4 H 0 1 N N N N N N 55.185 29.921 0.223 2.855 -3.740 -1.487 H4 A1LZ6 43 A1LZ6 H5 H5 H 0 1 N N N N N N 52.795 29.562 1.027 2.119 -2.387 0.396 H5 A1LZ6 44 A1LZ6 H6 H6 H 0 1 N N N N N N 51.508 25.281 -4.862 8.173 1.545 -1.463 H6 A1LZ6 45 A1LZ6 H7 H7 H 0 1 N N N N N N 52.749 26.111 -5.861 8.542 1.020 0.197 H7 A1LZ6 46 A1LZ6 H8 H8 H 0 1 N N N N N N 53.202 24.681 -4.872 9.167 0.095 -1.189 H8 A1LZ6 47 A1LZ6 H9 H9 H 0 1 N N N N N N 48.632 28.642 2.539 2.906 -2.453 3.042 H9 A1LZ6 48 A1LZ6 H10 H10 H 0 1 N N N N N N 49.002 26.989 1.940 1.096 -2.106 3.122 H10 A1LZ6 49 A1LZ6 H11 H11 H 0 1 N N N N N N 46.419 34.212 1.314 -0.809 4.545 -1.671 H11 A1LZ6 50 A1LZ6 H12 H12 H 0 1 N N N N N N 48.076 35.887 0.483 -3.007 3.465 -1.458 H12 A1LZ6 51 A1LZ6 H13 H13 H 0 1 N N N N N N 50.218 37.620 -1.027 -3.420 0.979 -2.284 H13 A1LZ6 52 A1LZ6 H14 H14 H 0 1 N N N N N N 50.257 37.113 0.696 -4.982 1.681 -1.676 H14 A1LZ6 53 A1LZ6 H15 H15 H 0 1 N N N N N N 52.358 36.070 0.497 -4.426 -1.169 -1.664 H15 A1LZ6 54 A1LZ6 H16 H16 H 0 1 N N N N N N 52.346 34.557 -1.299 -3.628 -0.563 1.062 H16 A1LZ6 55 A1LZ6 H17 H17 H 0 1 N N N N N N 51.739 35.775 -2.472 -2.447 -0.633 -0.319 H17 A1LZ6 56 A1LZ6 H18 H18 H 0 1 N N N N N N 51.866 39.032 0.035 -7.019 -0.551 -2.057 H18 A1LZ6 57 A1LZ6 H19 H19 H 0 1 N N N N N N 52.529 37.908 1.270 -6.619 1.115 -1.576 H19 A1LZ6 58 A1LZ6 H20 H20 H 0 1 N N N N N N 54.178 35.798 -0.702 -5.418 -2.091 0.829 H20 A1LZ6 59 A1LZ6 H21 H21 H 0 1 N N N N N N 54.501 37.046 -1.953 -6.327 -2.400 -0.670 H21 A1LZ6 60 A1LZ6 H22 H22 H 0 1 N N N N N N 55.211 37.038 0.962 -7.414 -1.016 1.824 H22 A1LZ6 61 A1LZ6 H23 H23 H 0 1 N N N N N N 56.276 37.177 -0.477 -7.786 -2.679 1.309 H23 A1LZ6 62 A1LZ6 H24 H24 H 0 1 N N N N N N 54.012 39.527 1.669 -8.141 0.927 0.367 H24 A1LZ6 63 A1LZ6 H25 H25 H 0 1 N N N N N N 53.658 40.365 0.120 -9.013 0.600 -1.151 H25 A1LZ6 64 A1LZ6 H26 H26 H 0 1 N N N N N N 49.058 26.989 -0.934 4.301 1.320 2.633 H26 A1LZ6 65 A1LZ6 H27 H27 H 0 1 N N N N N N 49.995 25.937 -3.002 6.422 1.605 1.444 H27 A1LZ6 66 A1LZ6 H28 H28 H 0 1 N N N N N N 55.190 40.615 -1.349 -10.733 -0.655 0.205 H28 A1LZ6 67 A1LZ6 H29 H29 H 0 1 N N N N N N 56.217 39.248 -1.900 -10.225 -2.022 1.226 H29 A1LZ6 68 A1LZ6 H30 H30 H 0 1 N N N N N N 54.428 39.135 -2.025 -9.801 -0.357 1.691 H30 A1LZ6 69 A1LZ6 H31 H31 H 0 1 N N N N N N 50.777 32.780 -0.802 -1.268 0.364 0.917 H31 A1LZ6 70 A1LZ6 H32 H32 H 0 1 N N N N N N 47.034 31.215 2.308 2.112 3.262 -1.442 H32 A1LZ6 71 A1LZ6 H33 H33 H 0 1 N N N N N N 45.743 31.777 1.193 1.410 4.794 -0.870 H33 A1LZ6 72 A1LZ6 H34 H34 H 0 1 N N N N N N 46.932 30.547 0.644 2.098 3.640 0.297 H34 A1LZ6 73 A1LZ6 H35 H35 H 0 1 N N N N N N 50.756 30.653 1.518 0.272 -0.252 1.706 H35 A1LZ6 74 A1LZ6 H37 H37 H 0 1 N N N N N N 56.259 39.106 1.615 -9.079 -2.937 -0.782 H37 A1LZ6 75 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1LZ6 C18 N17 SING N N 1 A1LZ6 O16 C15 DOUB N N 2 A1LZ6 N17 C15 SING N N 3 A1LZ6 N17 C08 SING N N 4 A1LZ6 C15 C10 SING N N 5 A1LZ6 C08 C07 DOUB Y N 6 A1LZ6 C08 C09 SING Y N 7 A1LZ6 C07 C06 SING Y N 8 A1LZ6 C10 C09 DOUB Y N 9 A1LZ6 C10 C11 SING Y N 10 A1LZ6 C09 C14 SING Y N 11 A1LZ6 C11 C12 DOUB Y N 12 A1LZ6 C37 C33 SING N N 13 A1LZ6 C29 N26 SING N N 14 A1LZ6 C29 C28 SING N N 15 A1LZ6 C06 C05 DOUB Y N 16 A1LZ6 C31 N30 SING N N 17 A1LZ6 C31 C32 SING N N 18 A1LZ6 N26 C27 SING N N 19 A1LZ6 N26 C25 SING N N 20 A1LZ6 C14 C05 SING Y N 21 A1LZ6 C14 C13 DOUB Y N 22 A1LZ6 N30 C28 SING N N 23 A1LZ6 N30 C36 SING N N 24 A1LZ6 O01 C02 DOUB N N 25 A1LZ6 C28 C27 SING N N 26 A1LZ6 C38 C25 DOUB Y N 27 A1LZ6 C38 C21 SING Y N 28 A1LZ6 C12 C13 SING Y N 29 A1LZ6 C05 C04 SING N N 30 A1LZ6 C25 C24 SING Y N 31 A1LZ6 C32 C33 SING N N 32 A1LZ6 C33 C35 SING N N 33 A1LZ6 C33 O34 SING N N 34 A1LZ6 C02 C21 SING N N 35 A1LZ6 C02 N03 SING N N 36 A1LZ6 C21 C22 DOUB Y N 37 A1LZ6 C36 C35 SING N N 38 A1LZ6 C24 C23 DOUB Y N 39 A1LZ6 C22 C23 SING Y N 40 A1LZ6 C22 C39 SING N N 41 A1LZ6 N03 C04 SING N N 42 A1LZ6 C04 C20 SING N N 43 A1LZ6 C04 C19 SING N N 44 A1LZ6 C20 C19 SING N N 45 A1LZ6 C11 H1 SING N N 46 A1LZ6 C19 H2 SING N N 47 A1LZ6 C19 H3 SING N N 48 A1LZ6 C12 H4 SING N N 49 A1LZ6 C13 H5 SING N N 50 A1LZ6 C18 H6 SING N N 51 A1LZ6 C18 H7 SING N N 52 A1LZ6 C18 H8 SING N N 53 A1LZ6 C20 H9 SING N N 54 A1LZ6 C20 H10 SING N N 55 A1LZ6 C23 H11 SING N N 56 A1LZ6 C24 H12 SING N N 57 A1LZ6 C27 H13 SING N N 58 A1LZ6 C27 H14 SING N N 59 A1LZ6 C28 H15 SING N N 60 A1LZ6 C29 H16 SING N N 61 A1LZ6 C29 H17 SING N N 62 A1LZ6 C36 H18 SING N N 63 A1LZ6 C36 H19 SING N N 64 A1LZ6 C31 H20 SING N N 65 A1LZ6 C31 H21 SING N N 66 A1LZ6 C32 H22 SING N N 67 A1LZ6 C32 H23 SING N N 68 A1LZ6 C35 H24 SING N N 69 A1LZ6 C35 H25 SING N N 70 A1LZ6 C06 H26 SING N N 71 A1LZ6 C07 H27 SING N N 72 A1LZ6 C37 H28 SING N N 73 A1LZ6 C37 H29 SING N N 74 A1LZ6 C37 H30 SING N N 75 A1LZ6 C38 H31 SING N N 76 A1LZ6 C39 H32 SING N N 77 A1LZ6 C39 H33 SING N N 78 A1LZ6 C39 H34 SING N N 79 A1LZ6 N03 H35 SING N N 80 A1LZ6 O34 H37 SING N N 81 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1LZ6 InChI InChI 1.06 "InChI=1S/C32H36N4O3/c1-20-7-8-21(36-18-22(19-36)35-15-13-31(2,39)14-16-35)17-25(20)29(37)33-32(11-12-32)26-9-10-27-28-23(26)5-4-6-24(28)30(38)34(27)3/h4-10,17,22,39H,11-16,18-19H2,1-3H3,(H,33,37)" A1LZ6 InChIKey InChI 1.06 IHUOWXQOCOSXSU-UHFFFAOYSA-N A1LZ6 SMILES_CANONICAL CACTVS 3.385 "CN1C(=O)c2cccc3c(ccc1c23)C4(CC4)NC(=O)c5cc(ccc5C)N6CC(C6)N7CCC(C)(O)CC7" A1LZ6 SMILES CACTVS 3.385 "CN1C(=O)c2cccc3c(ccc1c23)C4(CC4)NC(=O)c5cc(ccc5C)N6CC(C6)N7CCC(C)(O)CC7" A1LZ6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1C(=O)NC2(CC2)c3ccc4c5c3cccc5C(=O)N4C)N6CC(C6)N7CCC(CC7)(C)O" A1LZ6 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1C(=O)NC2(CC2)c3ccc4c5c3cccc5C(=O)N4C)N6CC(C6)N7CCC(CC7)(C)O" # _pdbx_chem_comp_identifier.comp_id A1LZ6 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-methyl-~{N}-[1-(1-methyl-2-oxidanylidene-benzo[cd]indol-6-yl)cyclopropyl]-5-[3-(4-methyl-4-oxidanyl-piperidin-1-yl)azetidin-1-yl]benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1LZ6 "Create component" 2024-04-03 PDBJ A1LZ6 "Initial release" 2024-12-04 RCSB #