data_A1MB3 # _chem_comp.id A1MB3 _chem_comp.name "(2~{R})-2-[3-(4-cyanophenyl)sulfonyl-4-methyl-pyrazol-1-yl]-~{N}-(2-methyl-5-piperazin-1-yl-phenyl)butanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H30 N6 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-09-09 _chem_comp.pdbx_modified_date 2026-09-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 506.620 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1MB3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9WON _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1MB3 N1 N1 N 0 1 N N N N N N -18.892 8.161 -41.921 -2.681 -2.090 1.138 N1 A1MB3 1 A1MB3 N3 N2 N 0 1 N N N N N N -21.240 12.851 -36.587 -5.294 4.403 -1.455 N3 A1MB3 2 A1MB3 C4 C1 C 0 1 N N N N N N -19.299 7.594 -43.064 -1.543 -1.756 0.498 C4 A1MB3 3 A1MB3 C5 C2 C 0 1 Y N N N N N -19.569 8.153 -40.705 -3.859 -1.376 0.889 C5 A1MB3 4 A1MB3 C6 C3 C 0 1 Y N N N N N -19.995 9.336 -40.109 -3.803 -0.014 0.629 C6 A1MB3 5 A1MB3 C7 C4 C 0 1 Y N N N N N -20.618 9.308 -38.848 -4.973 0.691 0.383 C7 A1MB3 6 A1MB3 C8 C5 C 0 1 N N N N N N -20.497 11.747 -38.666 -6.268 2.604 -0.110 C8 A1MB3 7 A1MB3 C10 C6 C 0 1 N N N N N N -21.889 11.599 -36.160 -3.948 3.861 -1.224 C10 A1MB3 8 A1MB3 C13 C7 C 0 1 Y N N N N N -20.328 6.906 -38.806 -6.248 -1.325 0.658 C13 A1MB3 9 A1MB3 C15 C8 C 0 1 N N N N N N -19.236 5.627 -40.631 -5.144 -3.511 1.173 C15 A1MB3 10 A1MB3 C17 C9 C 0 1 Y N N N N N -20.231 7.547 -47.257 1.906 -1.043 -1.711 C17 A1MB3 11 A1MB3 C20 C10 C 0 1 Y N N N N N -21.685 10.633 -47.825 4.833 0.451 0.007 C20 A1MB3 12 A1MB3 C21 C11 C 0 1 Y N N N N N -21.837 11.580 -46.822 5.046 0.540 1.371 C21 A1MB3 13 A1MB3 C22 C12 C 0 1 Y N N N N N -23.098 11.924 -46.386 5.273 1.767 1.958 C22 A1MB3 14 A1MB3 C24 C13 C 0 1 N N N N N N -25.519 11.720 -46.440 5.524 4.199 1.775 C24 A1MB3 15 A1MB3 C26 C14 C 0 1 Y N N N N N -22.811 10.008 -48.370 4.847 1.590 -0.778 C26 A1MB3 16 A1MB3 C1 C15 C 0 1 N N N N N N -16.329 6.526 -45.198 0.646 -4.894 0.540 C1 A1MB3 17 A1MB3 C2 C16 C 0 1 N N N N N N -17.459 6.403 -44.177 -0.572 -4.022 0.233 C2 A1MB3 18 A1MB3 C3 C17 C 0 1 N N R N N N -18.322 7.672 -44.203 -0.300 -2.587 0.688 C3 A1MB3 19 A1MB3 O1 O1 O 0 1 N N N N N N -20.377 7.041 -43.180 -1.519 -0.786 -0.230 O1 A1MB3 20 A1MB3 N2 N3 N 0 1 N N N N N N -21.111 10.477 -38.222 -4.922 2.062 0.121 N2 A1MB3 21 A1MB3 C9 C18 C 0 1 N N N N N N -21.254 12.932 -38.056 -6.176 4.118 -0.314 C9 A1MB3 22 A1MB3 C11 C19 C 0 1 N N N N N N -21.141 10.397 -36.744 -4.040 2.346 -1.020 C11 A1MB3 23 A1MB3 C12 C20 C 0 1 Y N N N N N -20.779 8.066 -38.219 -6.196 0.031 0.398 C12 A1MB3 24 A1MB3 C14 C21 C 0 1 Y N N N N N -19.715 6.933 -40.039 -5.084 -2.031 0.897 C14 A1MB3 25 A1MB3 N4 N4 N 0 1 Y N N N N N -19.034 7.818 -45.463 0.792 -2.021 -0.108 N4 A1MB3 26 A1MB3 C16 C22 C 0 1 Y N N N N N -19.760 6.920 -46.161 0.671 -1.429 -1.315 C16 A1MB3 27 A1MB3 C18 C23 C 0 1 N N N N N N -21.094 6.915 -48.324 2.245 -0.341 -3.000 C18 A1MB3 28 A1MB3 C19 C24 C 0 1 Y N N N N N -19.765 8.869 -47.211 2.812 -1.407 -0.709 C19 A1MB3 29 A1MB3 S S1 S 0 1 N N N N N N -20.050 10.183 -48.347 4.551 -1.122 -0.736 S A1MB3 30 A1MB3 O2 O2 O 0 1 N N N N N N -19.136 11.216 -48.004 4.915 -0.992 -2.103 O2 A1MB3 31 A1MB3 O3 O3 O 0 1 N N N N N N -20.136 9.578 -49.627 5.129 -2.086 0.134 O3 A1MB3 32 A1MB3 C23 C25 C 0 1 Y N N N N N -24.234 11.318 -46.937 5.288 2.921 1.172 C23 A1MB3 33 A1MB3 N5 N5 N 0 1 N N N N N N -26.505 12.085 -46.004 5.711 5.212 2.253 N5 A1MB3 34 A1MB3 C25 C26 C 0 1 Y N N N N N -24.089 10.349 -47.939 5.073 2.824 -0.204 C25 A1MB3 35 A1MB3 N6 N6 N 0 1 Y N N N N N -19.067 9.025 -46.133 2.146 -1.995 0.251 N6 A1MB3 36 A1MB3 H7 H1 H 0 1 N N N N N N -18.013 8.638 -41.944 -2.685 -2.828 1.767 H7 A1MB3 37 A1MB3 H13 H2 H 0 1 N N N N N N -20.295 12.865 -36.261 -5.686 4.046 -2.313 H13 A1MB3 38 A1MB3 H8 H4 H 0 1 N N N N N N -19.847 10.278 -40.616 -2.852 0.496 0.618 H8 A1MB3 39 A1MB3 H10 H5 H 0 1 N N N N N N -19.447 11.778 -38.340 -6.699 2.143 -0.998 H10 A1MB3 40 A1MB3 H9 H6 H 0 1 N N N N N N -20.543 11.811 -39.763 -6.899 2.392 0.753 H9 A1MB3 41 A1MB3 H14 H7 H 0 1 N N N N N N -21.876 11.538 -35.062 -3.318 4.073 -2.088 H14 A1MB3 42 A1MB3 H15 H8 H 0 1 N N N N N N -22.930 11.588 -36.516 -3.517 4.322 -0.336 H15 A1MB3 43 A1MB3 H19 H9 H 0 1 N N N N N N -20.456 5.964 -38.294 -7.199 -1.837 0.665 H19 A1MB3 44 A1MB3 H20 H10 H 0 1 N N N N N N -18.198 5.441 -40.319 -5.255 -3.677 2.244 H20 A1MB3 45 A1MB3 H21 H11 H 0 1 N N N N N N -19.877 4.807 -40.276 -5.997 -3.944 0.649 H21 A1MB3 46 A1MB3 H22 H12 H 0 1 N N N N N N -19.285 5.682 -41.729 -4.226 -3.983 0.825 H22 A1MB3 47 A1MB3 H27 H13 H 0 1 N N N N N N -20.968 12.047 -46.383 5.034 -0.354 1.978 H27 A1MB3 48 A1MB3 H28 H14 H 0 1 N N N N N N -23.211 12.668 -45.612 5.439 1.836 3.023 H28 A1MB3 49 A1MB3 H30 H15 H 0 1 N N N N N N -22.687 9.253 -49.133 4.680 1.513 -1.842 H30 A1MB3 50 A1MB3 H1 H16 H 0 1 N N N N N N -15.713 5.615 -45.176 0.453 -5.917 0.216 H1 A1MB3 51 A1MB3 H2 H17 H 0 1 N N N N N N -16.756 6.656 -46.203 1.516 -4.504 0.011 H2 A1MB3 52 A1MB3 H3 H18 H 0 1 N N N N N N -15.704 7.397 -44.950 0.840 -4.884 1.613 H3 A1MB3 53 A1MB3 H4 H19 H 0 1 N N N N N N -18.083 5.532 -44.426 -0.765 -4.033 -0.840 H4 A1MB3 54 A1MB3 H5 H20 H 0 1 N N N N N N -17.031 6.273 -43.172 -1.441 -4.412 0.762 H5 A1MB3 55 A1MB3 H6 H21 H 0 1 N N N N N N -17.666 8.542 -44.049 -0.020 -2.586 1.741 H6 A1MB3 56 A1MB3 H11 H22 H 0 1 N N N N N N -20.773 13.870 -38.371 -5.771 4.583 0.584 H11 A1MB3 57 A1MB3 H12 H23 H 0 1 N N N N N N -22.296 12.917 -38.410 -7.170 4.519 -0.514 H12 A1MB3 58 A1MB3 H16 H24 H 0 1 N N N N N N -21.651 9.471 -36.441 -4.446 1.882 -1.918 H16 A1MB3 59 A1MB3 H17 H25 H 0 1 N N N N N N -20.110 10.390 -36.360 -3.046 1.946 -0.820 H17 A1MB3 60 A1MB3 H18 H26 H 0 1 N N N N N N -21.266 8.018 -37.256 -7.107 0.578 0.208 H18 A1MB3 61 A1MB3 H23 H27 H 0 1 N N N N N N -19.932 5.889 -45.891 -0.247 -1.288 -1.866 H23 A1MB3 62 A1MB3 H24 H28 H 0 1 N N N N N N -22.155 7.041 -48.061 2.468 -1.080 -3.769 H24 A1MB3 63 A1MB3 H25 H29 H 0 1 N N N N N N -20.896 7.401 -49.291 1.397 0.267 -3.316 H25 A1MB3 64 A1MB3 H26 H30 H 0 1 N N N N N N -20.859 5.843 -48.398 3.114 0.299 -2.848 H26 A1MB3 65 A1MB3 H29 H31 H 0 1 N N N N N N -24.957 9.874 -48.371 5.083 3.713 -0.818 H29 A1MB3 66 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1MB3 C1 C2 SING N N 1 A1MB3 C2 C3 SING N N 2 A1MB3 C3 C4 SING N N 3 A1MB3 C3 N4 SING N N 4 A1MB3 C4 O1 DOUB N N 5 A1MB3 C4 N1 SING N N 6 A1MB3 N1 C5 SING N N 7 A1MB3 C5 C6 DOUB Y N 8 A1MB3 C5 C14 SING Y N 9 A1MB3 C6 C7 SING Y N 10 A1MB3 C7 N2 SING N N 11 A1MB3 C7 C12 DOUB Y N 12 A1MB3 N2 C8 SING N N 13 A1MB3 N2 C11 SING N N 14 A1MB3 C8 C9 SING N N 15 A1MB3 C9 N3 SING N N 16 A1MB3 N3 C10 SING N N 17 A1MB3 C10 C11 SING N N 18 A1MB3 C12 C13 SING Y N 19 A1MB3 C13 C14 DOUB Y N 20 A1MB3 C14 C15 SING N N 21 A1MB3 N4 C16 SING Y N 22 A1MB3 N4 N6 SING Y N 23 A1MB3 C16 C17 DOUB Y N 24 A1MB3 C17 C18 SING N N 25 A1MB3 C17 C19 SING Y N 26 A1MB3 C19 S SING N N 27 A1MB3 C19 N6 DOUB Y N 28 A1MB3 S O2 DOUB N N 29 A1MB3 S O3 DOUB N N 30 A1MB3 S C20 SING N N 31 A1MB3 C20 C21 DOUB Y N 32 A1MB3 C20 C26 SING Y N 33 A1MB3 C21 C22 SING Y N 34 A1MB3 C22 C23 DOUB Y N 35 A1MB3 C23 C24 SING N N 36 A1MB3 C23 C25 SING Y N 37 A1MB3 C24 N5 TRIP N N 38 A1MB3 C25 C26 DOUB Y N 39 A1MB3 N1 H7 SING N N 40 A1MB3 N3 H13 SING N N 41 A1MB3 C6 H8 SING N N 42 A1MB3 C8 H10 SING N N 43 A1MB3 C8 H9 SING N N 44 A1MB3 C10 H14 SING N N 45 A1MB3 C10 H15 SING N N 46 A1MB3 C13 H19 SING N N 47 A1MB3 C15 H20 SING N N 48 A1MB3 C15 H21 SING N N 49 A1MB3 C15 H22 SING N N 50 A1MB3 C21 H27 SING N N 51 A1MB3 C22 H28 SING N N 52 A1MB3 C26 H30 SING N N 53 A1MB3 C1 H1 SING N N 54 A1MB3 C1 H2 SING N N 55 A1MB3 C1 H3 SING N N 56 A1MB3 C2 H4 SING N N 57 A1MB3 C2 H5 SING N N 58 A1MB3 C3 H6 SING N N 59 A1MB3 C9 H11 SING N N 60 A1MB3 C9 H12 SING N N 61 A1MB3 C11 H16 SING N N 62 A1MB3 C11 H17 SING N N 63 A1MB3 C12 H18 SING N N 64 A1MB3 C16 H23 SING N N 65 A1MB3 C18 H24 SING N N 66 A1MB3 C18 H25 SING N N 67 A1MB3 C18 H26 SING N N 68 A1MB3 C25 H29 SING N N 69 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1MB3 InChI InChI 1.06 "InChI=1S/C26H30N6O3S/c1-4-24(25(33)29-23-15-21(8-5-18(23)2)31-13-11-28-12-14-31)32-17-19(3)26(30-32)36(34,35)22-9-6-20(16-27)7-10-22/h5-10,15,17,24,28H,4,11-14H2,1-3H3,(H,29,33)/t24-/m1/s1" A1MB3 InChIKey InChI 1.06 SPTZLSXBWOIULJ-XMMPIXPASA-N A1MB3 SMILES_CANONICAL CACTVS 3.385 "CC[C@@H](n1cc(C)c(n1)[S](=O)(=O)c2ccc(cc2)C#N)C(=O)Nc3cc(ccc3C)N4CCNCC4" A1MB3 SMILES CACTVS 3.385 "CC[CH](n1cc(C)c(n1)[S](=O)(=O)c2ccc(cc2)C#N)C(=O)Nc3cc(ccc3C)N4CCNCC4" A1MB3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@H](C(=O)Nc1cc(ccc1C)N2CCNCC2)n3cc(c(n3)S(=O)(=O)c4ccc(cc4)C#N)C" A1MB3 SMILES "OpenEye OEToolkits" 2.0.7 "CCC(C(=O)Nc1cc(ccc1C)N2CCNCC2)n3cc(c(n3)S(=O)(=O)c4ccc(cc4)C#N)C" # _pdbx_chem_comp_identifier.comp_id A1MB3 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R})-2-[3-(4-cyanophenyl)sulfonyl-4-methyl-pyrazol-1-yl]-~{N}-(2-methyl-5-piperazin-1-yl-phenyl)butanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1MB3 "Create component" 2025-09-09 PDBJ A1MB3 "Initial release" 2026-09-09 RCSB #