data_A1MCG # _chem_comp.id A1MCG _chem_comp.name "(2~{S})-2-azanyl-3-[4-(pyrimidin-2-ylamino)phenyl]propanoic acid" _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H14 N4 O2" _chem_comp.mon_nstd_parent_comp_id PHE _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-10-09 _chem_comp.pdbx_modified_date 2025-12-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 258.276 _chem_comp.one_letter_code F _chem_comp.three_letter_code A1MCG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9X2Q _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1MCG C17 C1 C 0 1 Y N N N N N -15.850 -26.176 5.210 5.198 1.725 0.421 C17 A1MCG 1 A1MCG N N1 N 0 1 N N N Y Y N -16.095 -29.693 14.728 -3.328 -0.442 1.597 N A1MCG 2 A1MCG CA C2 C 0 1 N N S N Y N -15.705 -30.705 13.746 -3.434 0.389 0.390 CA A1MCG 3 A1MCG C C3 C 0 1 N N N N Y Y -15.177 -31.969 14.420 -4.877 0.757 0.159 C A1MCG 4 A1MCG O O1 O 0 1 N N N N Y Y -14.543 -31.840 15.490 -5.756 0.105 0.671 O A1MCG 5 A1MCG CB C4 C 0 1 N N N N N N -14.615 -30.156 12.794 -2.908 -0.392 -0.815 CB A1MCG 6 A1MCG CG C5 C 0 1 Y N N N N N -15.113 -29.033 11.860 -1.434 -0.654 -0.640 CG A1MCG 7 A1MCG CD1 C6 C 0 1 Y N N N N N -14.575 -27.737 11.941 -1.009 -1.804 -0.001 CD1 A1MCG 8 A1MCG CD2 C7 C 0 1 Y N N N N N -16.088 -29.299 10.891 -0.510 0.254 -1.124 CD2 A1MCG 9 A1MCG CE1 C8 C 0 1 Y N N N N N -15.002 -26.719 11.088 0.341 -2.047 0.162 CE1 A1MCG 10 A1MCG CE2 C9 C 0 1 Y N N N N N -16.537 -28.275 10.036 0.841 0.017 -0.964 CE2 A1MCG 11 A1MCG CZ C10 C 0 1 Y N N N N N -15.986 -26.987 10.125 1.272 -1.135 -0.317 CZ A1MCG 12 A1MCG C14 C11 C 0 1 Y N N N N N -16.255 -25.991 7.819 3.511 -0.319 0.043 C14 A1MCG 13 A1MCG C16 C12 C 0 1 Y N N N N N -15.612 -27.254 5.986 5.675 0.433 0.271 C16 A1MCG 14 A1MCG C18 C13 C 0 1 Y N N N N N -16.287 -24.994 5.736 3.829 1.936 0.371 C18 A1MCG 15 A1MCG N13 N2 N 0 1 N N N N N N -16.457 -25.927 9.245 2.639 -1.377 -0.154 N13 A1MCG 16 A1MCG N15 N3 N 0 1 Y N N N N N -15.805 -27.155 7.271 4.814 -0.555 0.085 N15 A1MCG 17 A1MCG N19 N4 N 0 1 Y N N N N N -16.503 -24.872 7.056 3.023 0.905 0.177 N19 A1MCG 18 A1MCG H171 H1 H 0 0 N N N N N N -15.691 -26.250 4.144 5.878 2.549 0.578 H171 A1MCG 19 A1MCG H H2 H 0 1 N N N Y Y N -16.435 -28.881 14.254 -3.867 -1.290 1.500 H A1MCG 20 A1MCG H2 H3 H 0 1 N Y N Y Y N -16.815 -30.060 15.317 -2.364 -0.649 1.810 H2 A1MCG 21 A1MCG HA H5 H 0 1 N N N N Y N -16.582 -30.977 13.140 -2.844 1.296 0.521 HA A1MCG 22 A1MCG HB2 H7 H 0 1 N N N N N N -13.790 -29.760 13.404 -3.439 -1.341 -0.893 HB2 A1MCG 23 A1MCG HB3 H8 H 0 1 N N N N N N -14.247 -30.986 12.173 -3.068 0.189 -1.723 HB3 A1MCG 24 A1MCG HD1 H9 H 0 1 N N N N N N -13.815 -27.525 12.679 -1.734 -2.513 0.372 HD1 A1MCG 25 A1MCG HD2 H10 H 0 1 N N N N N N -16.497 -30.294 10.799 -0.845 1.148 -1.627 HD2 A1MCG 26 A1MCG HE1 H11 H 0 1 N N N N N N -14.577 -25.729 11.169 0.672 -2.945 0.662 HE1 A1MCG 27 A1MCG HE2 H12 H 0 1 N N N N N N -17.308 -28.481 9.309 1.563 0.726 -1.342 HE2 A1MCG 28 A1MCG H161 H13 H 0 0 N N N N N N -15.268 -28.181 5.551 6.736 0.234 0.304 H161 A1MCG 29 A1MCG H181 H14 H 0 0 N N N N N N -16.460 -24.150 5.085 3.424 2.931 0.489 H181 A1MCG 30 A1MCG H131 H15 H 0 0 N N N N N N -16.930 -25.138 9.638 2.976 -2.286 -0.178 H131 A1MCG 31 A1MCG OXT O1 O 0 1 N Y N N Y Y -15.430 -33.135 13.824 -5.186 1.809 -0.615 OXT A1MCG 32 A1MCG HXT H1 H 0 1 N Y N N Y Y -15.056 -33.841 14.337 -6.125 2.007 -0.734 H1 A1MCG 33 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1MCG O C DOUB N N 1 A1MCG C CA SING N N 2 A1MCG CA N SING N N 3 A1MCG CA CB SING N N 4 A1MCG CB CG SING N N 5 A1MCG CG CD1 DOUB Y N 6 A1MCG CG CD2 SING Y N 7 A1MCG CD1 CE1 SING Y N 8 A1MCG CE1 CZ DOUB Y N 9 A1MCG CZ CE2 SING Y N 10 A1MCG CZ N13 SING N N 11 A1MCG CE2 CD2 DOUB Y N 12 A1MCG N13 C14 SING N N 13 A1MCG C14 N15 DOUB Y N 14 A1MCG C14 N19 SING Y N 15 A1MCG N15 C16 SING Y N 16 A1MCG C16 C17 DOUB Y N 17 A1MCG C17 C18 SING Y N 18 A1MCG C18 N19 DOUB Y N 19 A1MCG C17 H171 SING N N 20 A1MCG N H SING N N 21 A1MCG N H2 SING N N 22 A1MCG CA HA SING N N 23 A1MCG CB HB2 SING N N 24 A1MCG CB HB3 SING N N 25 A1MCG CD1 HD1 SING N N 26 A1MCG CD2 HD2 SING N N 27 A1MCG CE1 HE1 SING N N 28 A1MCG CE2 HE2 SING N N 29 A1MCG C16 H161 SING N N 30 A1MCG C18 H181 SING N N 31 A1MCG N13 H131 SING N N 32 A1MCG C OXT SING N N 33 A1MCG OXT HXT SING N N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1MCG InChI InChI 1.06 "InChI=1S/C13H14N4O2/c14-11(12(18)19)8-9-2-4-10(5-3-9)17-13-15-6-1-7-16-13/h1-7,11H,8,14H2,(H,18,19)(H,15,16,17)/t11-/m0/s1" A1MCG InChIKey InChI 1.06 BHGZPUUBJIWDGB-NSHDSACASA-N A1MCG SMILES_CANONICAL CACTVS 3.385 "N[C@@H](Cc1ccc(Nc2ncccn2)cc1)C(O)=O" A1MCG SMILES CACTVS 3.385 "N[CH](Cc1ccc(Nc2ncccn2)cc1)C(O)=O" A1MCG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cnc(nc1)Nc2ccc(cc2)C[C@@H](C(=O)O)N" A1MCG SMILES "OpenEye OEToolkits" 2.0.7 "c1cnc(nc1)Nc2ccc(cc2)CC(C(=O)O)N" # _pdbx_chem_comp_identifier.comp_id A1MCG _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-azanyl-3-[4-(pyrimidin-2-ylamino)phenyl]propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1MCG "Create component" 2025-10-15 PDBJ A1MCG "Initial release" 2025-12-31 RCSB # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1MCG _pdbx_chem_comp_pcm.modified_residue_id PHE _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Non-standard residue" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #