data_A1PP1 # _chem_comp.id A1PP1 _chem_comp.name "N-{[(3S)-5-oxopyrrolidin-3-yl]methyl}-7H-pyrrolo[2,3-d]pyrimidine-4-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H13 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-09-04 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 259.264 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1PP1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15PQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1PP1 C11 C1 C 0 1 Y N N N N N -46.736 -29.008 4.826 -2.997 0.273 -0.102 C11 A1PP1 1 A1PP1 C12 C2 C 0 1 N N N N N N -45.201 -31.640 0.344 4.358 1.203 0.765 C12 A1PP1 2 A1PP1 C1 C3 C 0 1 N N N N N N -43.696 -32.434 1.917 5.025 -0.613 -0.519 C1 A1PP1 3 A1PP1 C10 C4 C 0 1 Y N N N N N -48.138 -28.776 4.570 -3.562 1.574 -0.440 C10 A1PP1 4 A1PP1 C2 C5 C 0 1 N N N N N N -42.847 -31.594 0.975 3.513 -0.649 -0.502 C2 A1PP1 5 A1PP1 C3 C6 C 0 1 N N S N N N -43.899 -30.843 0.153 3.124 0.278 0.673 C3 A1PP1 6 A1PP1 C4 C7 C 0 1 N N N N N N -44.012 -29.369 0.577 1.862 1.078 0.345 C4 A1PP1 7 A1PP1 C5 C8 C 0 1 N N N N N N -45.512 -29.195 2.565 -0.531 0.680 0.125 C5 A1PP1 8 A1PP1 C6 C9 C 0 1 Y N N N N N -45.539 -29.191 4.072 -1.709 -0.217 0.163 C6 A1PP1 9 A1PP1 C7 C10 C 0 1 Y N N N N N -44.370 -29.390 6.079 -2.619 -2.312 0.487 C7 A1PP1 10 A1PP1 C8 C11 C 0 1 Y N N N N N -46.565 -29.038 6.239 -4.088 -0.628 -0.052 C8 A1PP1 11 A1PP1 C9 C12 C 0 1 Y N N N N N -48.761 -28.685 5.792 -4.890 1.402 -0.569 C9 A1PP1 12 A1PP1 N1 N1 N 0 1 N N N N N N -44.297 -29.314 2.005 0.697 0.191 0.383 N1 A1PP1 13 A1PP1 N2 N2 N 0 1 Y N N N N N -44.375 -29.380 4.744 -1.574 -1.510 0.451 N2 A1PP1 14 A1PP1 N3 N3 N 0 1 Y N N N N N -45.398 -29.229 6.913 -3.846 -1.898 0.240 N3 A1PP1 15 A1PP1 N4 N4 N 0 1 Y N N N N N -47.813 -28.837 6.789 -5.216 0.093 -0.340 N4 A1PP1 16 A1PP1 N5 N5 N 0 1 N N N N N N -44.969 -32.432 1.534 5.471 0.430 0.203 N5 A1PP1 17 A1PP1 O1 O1 O 0 1 N N N N N N -43.248 -33.025 2.895 5.732 -1.411 -1.098 O1 A1PP1 18 A1PP1 O2 O2 O 0 1 N N N N N N -46.543 -29.095 1.903 -0.673 1.858 -0.140 O2 A1PP1 19 A1PP1 H11 H1 H 0 1 N N N N N N -46.055 -30.962 0.489 4.194 2.109 0.181 H11 A1PP1 20 A1PP1 H12 H2 H 0 1 N N N N N N -45.391 -32.289 -0.524 4.563 1.458 1.805 H12 A1PP1 21 A1PP1 H10 H3 H 0 1 N N N N N N -48.608 -28.690 3.602 -3.018 2.499 -0.563 H10 A1PP1 22 A1PP1 H2 H4 H 0 1 N N N N N N -42.221 -32.230 0.332 3.112 -0.264 -1.440 H2 A1PP1 23 A1PP1 H1 H5 H 0 1 N N N N N N -42.207 -30.895 1.534 3.157 -1.664 -0.324 H1 A1PP1 24 A1PP1 H3 H6 H 0 1 N N N N N N -43.614 -30.883 -0.909 2.994 -0.292 1.593 H3 A1PP1 25 A1PP1 H5 H7 H 0 1 N N N N N N -43.065 -28.850 0.368 1.737 1.875 1.079 H5 A1PP1 26 A1PP1 H4 H8 H 0 1 N N N N N N -44.826 -28.884 0.018 1.956 1.513 -0.650 H4 A1PP1 27 A1PP1 H7 H9 H 0 1 N N N N N N -43.408 -29.549 6.544 -2.463 -3.354 0.720 H7 A1PP1 28 A1PP1 H9 H10 H 0 1 N N N N N N -49.817 -28.522 5.948 -5.594 2.182 -0.817 H9 A1PP1 29 A1PP1 H6 H11 H 0 1 N N N N N N -43.515 -29.370 2.626 0.811 -0.749 0.595 H6 A1PP1 30 A1PP1 H8 H12 H 0 1 N N N N N N -48.006 -28.805 7.770 -6.114 -0.271 -0.377 H8 A1PP1 31 A1PP1 H13 H13 H 0 1 N N N N N N -45.692 -32.926 2.018 6.408 0.643 0.334 H13 A1PP1 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1PP1 C3 C12 SING N N 1 A1PP1 C3 C4 SING N N 2 A1PP1 C3 C2 SING N N 3 A1PP1 C12 N5 SING N N 4 A1PP1 C4 N1 SING N N 5 A1PP1 C2 C1 SING N N 6 A1PP1 N5 C1 SING N N 7 A1PP1 O2 C5 DOUB N N 8 A1PP1 C1 O1 DOUB N N 9 A1PP1 N1 C5 SING N N 10 A1PP1 C5 C6 SING N N 11 A1PP1 C6 N2 DOUB Y N 12 A1PP1 C6 C11 SING Y N 13 A1PP1 C10 C11 SING Y N 14 A1PP1 C10 C9 DOUB Y N 15 A1PP1 N2 C7 SING Y N 16 A1PP1 C11 C8 DOUB Y N 17 A1PP1 C9 N4 SING Y N 18 A1PP1 C7 N3 DOUB Y N 19 A1PP1 C8 N4 SING Y N 20 A1PP1 C8 N3 SING Y N 21 A1PP1 C12 H11 SING N N 22 A1PP1 C12 H12 SING N N 23 A1PP1 C10 H10 SING N N 24 A1PP1 C2 H2 SING N N 25 A1PP1 C2 H1 SING N N 26 A1PP1 C3 H3 SING N N 27 A1PP1 C4 H5 SING N N 28 A1PP1 C4 H4 SING N N 29 A1PP1 C7 H7 SING N N 30 A1PP1 C9 H9 SING N N 31 A1PP1 N1 H6 SING N N 32 A1PP1 N4 H8 SING N N 33 A1PP1 N5 H13 SING N N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1PP1 SMILES ACDLabs 14.52 "O=C(NCC1CC(=O)NC1)c1ncnc2[NH]ccc21" A1PP1 InChI InChI 1.06 "InChI=1S/C12H13N5O2/c18-9-3-7(4-14-9)5-15-12(19)10-8-1-2-13-11(8)17-6-16-10/h1-2,6-7H,3-5H2,(H,14,18)(H,15,19)(H,13,16,17)/t7-/m0/s1" A1PP1 InChIKey InChI 1.06 MOPXGBRDJJRGIX-ZETCQYMHSA-N A1PP1 SMILES_CANONICAL CACTVS 3.385 "O=C1C[C@@H](CN1)CNC(=O)c2ncnc3[nH]ccc23" A1PP1 SMILES CACTVS 3.385 "O=C1C[CH](CN1)CNC(=O)c2ncnc3[nH]ccc23" A1PP1 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)C(=O)NC[C@H]3CC(=O)NC3" A1PP1 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)C(=O)NCC3CC(=O)NC3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1PP1 "SYSTEMATIC NAME" ACDLabs 14.52 "N-{[(3S)-5-oxopyrrolidin-3-yl]methyl}-7H-pyrrolo[2,3-d]pyrimidine-4-carboxamide" A1PP1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "~{N}-[[(3~{S})-5-oxidanylidenepyrrolidin-3-yl]methyl]-7~{H}-pyrrolo[2,3-d]pyrimidine-4-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1PP1 "Create component" 2026-09-04 RCSB A1PP1 "Initial release" 2026-11-04 RCSB #