data_A1PP6 # _chem_comp.id A1PP6 _chem_comp.name "(5S)-5-methyl-1-[(6-methyl-7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]pyrrolidin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H15 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-09-04 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 245.280 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1PP6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15BN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1PP6 C11 C1 C 0 1 Y N N N N N -43.858 -29.618 6.089 -0.909 2.338 0.825 C11 A1PP6 1 A1PP6 C12 C2 C 0 1 Y N N N N N -46.076 -29.398 6.044 -2.618 0.878 0.335 C12 A1PP6 2 A1PP6 C1 C3 C 0 1 N N N N N N -49.687 -29.113 5.567 -4.853 -1.910 -0.611 C1 A1PP6 3 A1PP6 C10 C4 C 0 1 N N N N N N -42.885 -28.617 1.272 2.702 -2.295 1.230 C10 A1PP6 4 A1PP6 C2 C5 C 0 1 Y N N N N N -48.221 -29.304 5.394 -3.713 -0.976 -0.299 C2 A1PP6 5 A1PP6 C3 C6 C 0 1 Y N N N N N -47.510 -29.600 4.258 -2.411 -1.278 -0.422 C3 A1PP6 6 A1PP6 C4 C7 C 0 1 Y N N N N N -46.139 -29.654 4.663 -1.660 -0.091 -0.016 C4 A1PP6 7 A1PP6 C5 C8 C 0 1 Y N N N N N -44.911 -29.926 4.052 -0.300 0.236 0.093 C5 A1PP6 8 A1PP6 C6 C9 C 0 1 N N N N N N -43.247 -31.985 2.369 2.689 0.449 -0.975 C6 A1PP6 9 A1PP6 C7 C10 C 0 1 N N N N N N -42.055 -32.279 1.475 4.133 0.601 -0.549 C7 A1PP6 10 A1PP6 C8 C11 C 0 1 N N N N N N -41.794 -30.917 0.817 4.352 -0.549 0.461 C8 A1PP6 11 A1PP6 C9 C12 C 0 1 N N S N N N -43.089 -30.103 0.993 2.915 -0.803 0.968 C9 A1PP6 12 A1PP6 N1 N1 N 0 1 N N N N N N -44.860 -30.223 2.699 0.679 -0.687 -0.225 N1 A1PP6 13 A1PP6 N2 N2 N 0 1 N N N N N N -43.738 -30.775 2.087 2.032 -0.342 -0.109 N2 A1PP6 14 A1PP6 N3 N3 N 0 1 Y N N N N N -43.772 -29.896 4.787 0.023 1.457 0.510 N3 A1PP6 15 A1PP6 N4 N4 N 0 1 Y N N N N N -44.958 -29.368 6.797 -2.195 2.071 0.748 N4 A1PP6 16 A1PP6 N5 N5 N 0 1 Y N N N N N -47.356 -29.184 6.472 -3.850 0.312 0.153 N5 A1PP6 17 A1PP6 O1 O1 O 0 1 N N N N N N -43.673 -32.752 3.228 2.196 0.968 -1.954 O1 A1PP6 18 A1PP6 H14 H1 H 0 1 N N N N N N -42.925 -29.593 6.633 -0.603 3.317 1.163 H14 A1PP6 19 A1PP6 H2 H2 H 0 1 N N N N N N -50.157 -30.078 5.808 -5.140 -1.796 -1.657 H2 A1PP6 20 A1PP6 H1 H3 H 0 1 N N N N N N -49.870 -28.402 6.386 -4.540 -2.938 -0.431 H1 A1PP6 21 A1PP6 H3 H4 H 0 1 N N N N N N -50.118 -28.718 4.635 -5.704 -1.672 0.027 H3 A1PP6 22 A1PP6 H11 H5 H 0 1 N N N N N N -43.863 -28.126 1.381 3.411 -2.636 1.985 H11 A1PP6 23 A1PP6 H12 H6 H 0 1 N N N N N N -42.308 -28.494 2.200 1.685 -2.459 1.587 H12 A1PP6 24 A1PP6 H13 H7 H 0 1 N N N N N N -42.337 -28.159 0.436 2.858 -2.852 0.306 H13 A1PP6 25 A1PP6 H4 H8 H 0 1 N N N N N N -47.904 -29.759 3.265 -1.997 -2.219 -0.755 H4 A1PP6 26 A1PP6 H7 H9 H 0 1 N N N N N N -42.300 -33.044 0.723 4.798 0.489 -1.405 H7 A1PP6 27 A1PP6 H6 H10 H 0 1 N N N N N N -41.187 -32.609 2.065 4.289 1.567 -0.069 H6 A1PP6 28 A1PP6 H8 H11 H 0 1 N N N N N N -41.567 -31.046 -0.251 4.751 -1.432 -0.038 H8 A1PP6 29 A1PP6 H9 H12 H 0 1 N N N N N N -40.953 -30.409 1.312 5.004 -0.237 1.277 H9 A1PP6 30 A1PP6 H10 H13 H 0 1 N N N N N N -43.693 -30.209 0.080 2.729 -0.230 1.877 H10 A1PP6 31 A1PP6 H5 H14 H 0 1 N N N N N N -45.040 -29.363 2.221 0.429 -1.574 -0.528 H5 A1PP6 32 A1PP6 H15 H15 H 0 1 N N N N N N -47.626 -28.974 7.412 -4.696 0.755 0.320 H15 A1PP6 33 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1PP6 C8 C9 SING N N 1 A1PP6 C8 C7 SING N N 2 A1PP6 C9 C10 SING N N 3 A1PP6 C9 N2 SING N N 4 A1PP6 C7 C6 SING N N 5 A1PP6 N2 C6 SING N N 6 A1PP6 N2 N1 SING N N 7 A1PP6 C6 O1 DOUB N N 8 A1PP6 N1 C5 SING N N 9 A1PP6 C5 C4 DOUB Y N 10 A1PP6 C5 N3 SING Y N 11 A1PP6 C3 C4 SING Y N 12 A1PP6 C3 C2 DOUB Y N 13 A1PP6 C4 C12 SING Y N 14 A1PP6 N3 C11 DOUB Y N 15 A1PP6 C2 C1 SING N N 16 A1PP6 C2 N5 SING Y N 17 A1PP6 C12 N5 SING Y N 18 A1PP6 C12 N4 DOUB Y N 19 A1PP6 C11 N4 SING Y N 20 A1PP6 C11 H14 SING N N 21 A1PP6 C1 H2 SING N N 22 A1PP6 C1 H1 SING N N 23 A1PP6 C1 H3 SING N N 24 A1PP6 C10 H11 SING N N 25 A1PP6 C10 H12 SING N N 26 A1PP6 C10 H13 SING N N 27 A1PP6 C3 H4 SING N N 28 A1PP6 C7 H7 SING N N 29 A1PP6 C7 H6 SING N N 30 A1PP6 C8 H8 SING N N 31 A1PP6 C8 H9 SING N N 32 A1PP6 C9 H10 SING N N 33 A1PP6 N1 H5 SING N N 34 A1PP6 N5 H15 SING N N 35 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1PP6 SMILES ACDLabs 14.52 "Cc1cc2c(ncnc2[NH]1)NN1C(=O)CCC1C" A1PP6 InChI InChI 1.06 "InChI=1S/C12H15N5O/c1-7-5-9-11(15-7)13-6-14-12(9)16-17-8(2)3-4-10(17)18/h5-6,8H,3-4H2,1-2H3,(H2,13,14,15,16)/t8-/m0/s1" A1PP6 InChIKey InChI 1.06 QMIXOPGIMVNAQT-QMMMGPOBSA-N A1PP6 SMILES_CANONICAL CACTVS 3.385 "C[C@H]1CCC(=O)N1Nc2ncnc3[nH]c(C)cc23" A1PP6 SMILES CACTVS 3.385 "C[CH]1CCC(=O)N1Nc2ncnc3[nH]c(C)cc23" A1PP6 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1cc2c([nH]1)ncnc2NN3[C@H](CCC3=O)C" A1PP6 SMILES "OpenEye OEToolkits" 3.1.0.0 "Cc1cc2c([nH]1)ncnc2NN3C(CCC3=O)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1PP6 "SYSTEMATIC NAME" ACDLabs 14.52 "(5S)-5-methyl-1-[(6-methyl-7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]pyrrolidin-2-one" A1PP6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(5~{S})-5-methyl-1-[(6-methyl-7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)amino]pyrrolidin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1PP6 "Create component" 2026-09-04 RCSB A1PP6 "Initial release" 2026-11-04 RCSB #