data_A1PRH # _chem_comp.id A1PRH _chem_comp.name "4-{(3R)-3-[(pyridin-2-yl)methoxy]pyrrolidin-1-yl}-7H-pyrrolo[2,3-d]pyrimidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H17 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-09-04 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 295.339 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1PRH _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15RQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1PRH C13 C1 C 0 1 Y N N N N N -47.986 -28.981 4.441 4.467 1.468 -0.118 C13 A1PRH 1 A1PRH C16 C2 C 0 1 Y N N N N N -46.749 -34.867 -0.798 -6.764 0.163 -0.108 C16 A1PRH 2 A1PRH C15 C3 C 0 1 N N N N N N -46.390 -29.604 1.774 0.222 0.104 1.037 C15 A1PRH 3 A1PRH C11 C4 C 0 1 Y N N N N N -46.434 -29.058 6.136 4.731 -0.809 -0.211 C11 A1PRH 4 A1PRH C12 C5 C 0 1 Y N N N N N -48.633 -28.878 5.648 5.732 1.183 -0.468 C12 A1PRH 5 A1PRH C1 C6 C 0 1 Y N N N N N -46.072 -35.729 -1.677 -6.687 -1.169 -0.466 C1 A1PRH 6 A1PRH C10 C7 C 0 1 Y N N N N N -44.219 -29.244 6.022 3.127 -2.402 0.216 C10 A1PRH 7 A1PRH C14 C8 C 0 1 Y N N N N N -46.577 -29.111 4.732 3.779 0.191 0.060 C14 A1PRH 8 A1PRH C2 C9 C 0 1 Y N N N N N -44.864 -35.298 -2.255 -5.442 -1.773 -0.558 C2 A1PRH 9 A1PRH C3 C10 C 0 1 Y N N N N N -44.384 -34.017 -1.930 -4.317 -1.011 -0.284 C3 A1PRH 10 A1PRH C4 C11 C 0 1 Y N N N N N -45.144 -33.240 -1.042 -4.472 0.316 0.069 C4 A1PRH 11 A1PRH C5 C12 C 0 1 N N N N N N -44.692 -31.855 -0.640 -3.256 1.154 0.369 C5 A1PRH 12 A1PRH C6 C13 C 0 1 N N R N N N -45.702 -30.030 0.478 -0.863 1.060 0.483 C6 A1PRH 13 A1PRH C7 C14 C 0 1 N N N N N N -44.437 -29.171 0.454 -0.208 1.548 -0.836 C7 A1PRH 14 A1PRH C8 C15 C 0 1 N N N N N N -44.009 -29.185 1.917 1.289 1.635 -0.468 C8 A1PRH 15 A1PRH C9 C16 C 0 1 Y N N N N N -45.356 -29.227 4.014 2.478 -0.197 0.414 C9 A1PRH 16 A1PRH N1 N1 N 0 1 N N N N N N -45.268 -29.277 2.633 1.507 0.749 0.690 N1 A1PRH 17 A1PRH N2 N2 N 0 1 Y N N N N N -44.187 -29.278 4.696 2.202 -1.496 0.479 N2 A1PRH 18 A1PRH N3 N3 N 0 1 Y N N N N N -45.273 -29.144 6.829 4.358 -2.085 -0.121 N3 A1PRH 19 A1PRH N4 N4 N 0 1 Y N N N N N -47.692 -28.938 6.667 5.902 -0.176 -0.527 N4 A1PRH 20 A1PRH N5 N5 N 0 1 Y N N N N N -46.296 -33.644 -0.478 -5.671 0.858 0.146 N5 A1PRH 21 A1PRH O1 O1 O 0 1 N N N N N N -45.362 -31.408 0.528 -2.079 0.357 0.220 O1 A1PRH 22 A1PRH H14 H1 H 0 1 N N N N N N -48.443 -28.967 3.462 4.042 2.453 0.012 H14 A1PRH 23 A1PRH H17 H2 H 0 1 N N N N N N -47.677 -35.204 -0.359 -7.729 0.642 -0.039 H17 A1PRH 24 A1PRH H16 H3 H 0 1 N N N N N N -47.035 -28.728 1.612 0.127 0.006 2.118 H16 A1PRH 25 A1PRH H15 H4 H 0 1 N N N N N N -46.987 -30.426 2.196 0.148 -0.874 0.560 H15 A1PRH 26 A1PRH H13 H5 H 0 1 N N N N N N -49.699 -28.768 5.782 6.500 1.914 -0.674 H13 A1PRH 27 A1PRH H1 H6 H 0 1 N N N N N N -46.472 -36.706 -1.905 -7.584 -1.733 -0.673 H1 A1PRH 28 A1PRH H11 H7 H 0 1 N N N N N N -43.259 -29.306 6.514 2.861 -3.447 0.279 H11 A1PRH 29 A1PRH H2 H8 H 0 1 N N N N N N -44.318 -35.937 -2.933 -5.351 -2.813 -0.835 H2 A1PRH 30 A1PRH H3 H9 H 0 1 N N N N N N -43.462 -33.644 -2.350 -3.331 -1.449 -0.345 H3 A1PRH 31 A1PRH H5 H10 H 0 1 N N N N N N -43.609 -31.875 -0.446 -3.214 1.995 -0.324 H5 A1PRH 32 A1PRH H4 H11 H 0 1 N N N N N N -44.904 -31.157 -1.463 -3.315 1.528 1.391 H4 A1PRH 33 A1PRH H6 H12 H 0 1 N N N N N N -46.339 -29.795 -0.387 -1.036 1.892 1.166 H6 A1PRH 34 A1PRH H8 H13 H 0 1 N N N N N N -43.665 -29.616 -0.191 -0.367 0.826 -1.636 H8 A1PRH 35 A1PRH H7 H14 H 0 1 N N N N N N -44.656 -28.149 0.112 -0.593 2.528 -1.117 H7 A1PRH 36 A1PRH H9 H15 H 0 1 N N N N N N -43.369 -30.054 2.132 1.897 1.303 -1.310 H9 A1PRH 37 A1PRH H10 H16 H 0 1 N N N N N N -43.473 -28.261 2.180 1.547 2.661 -0.204 H10 A1PRH 38 A1PRH H12 H17 H 0 1 N N N N N N -47.901 -28.899 7.644 6.731 -0.624 -0.760 H12 A1PRH 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1PRH C2 C3 DOUB Y N 1 A1PRH C2 C1 SING Y N 2 A1PRH C3 C4 SING Y N 3 A1PRH C1 C16 DOUB Y N 4 A1PRH C4 C5 SING N N 5 A1PRH C4 N5 DOUB Y N 6 A1PRH C16 N5 SING Y N 7 A1PRH C5 O1 SING N N 8 A1PRH C7 C6 SING N N 9 A1PRH C7 C8 SING N N 10 A1PRH C6 O1 SING N N 11 A1PRH C6 C15 SING N N 12 A1PRH C15 N1 SING N N 13 A1PRH C8 N1 SING N N 14 A1PRH N1 C9 SING N N 15 A1PRH C9 N2 DOUB Y N 16 A1PRH C9 C14 SING Y N 17 A1PRH C13 C14 SING Y N 18 A1PRH C13 C12 DOUB Y N 19 A1PRH N2 C10 SING Y N 20 A1PRH C14 C11 DOUB Y N 21 A1PRH C12 N4 SING Y N 22 A1PRH C10 N3 DOUB Y N 23 A1PRH C11 N4 SING Y N 24 A1PRH C11 N3 SING Y N 25 A1PRH C13 H14 SING N N 26 A1PRH C16 H17 SING N N 27 A1PRH C15 H16 SING N N 28 A1PRH C15 H15 SING N N 29 A1PRH C12 H13 SING N N 30 A1PRH C1 H1 SING N N 31 A1PRH C10 H11 SING N N 32 A1PRH C2 H2 SING N N 33 A1PRH C3 H3 SING N N 34 A1PRH C5 H5 SING N N 35 A1PRH C5 H4 SING N N 36 A1PRH C6 H6 SING N N 37 A1PRH C7 H8 SING N N 38 A1PRH C7 H7 SING N N 39 A1PRH C8 H9 SING N N 40 A1PRH C8 H10 SING N N 41 A1PRH N4 H12 SING N N 42 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1PRH SMILES ACDLabs 14.52 "n1cnc(c2cc[NH]c12)N1CCC(C1)OCc1ccccn1" A1PRH InChI InChI 1.06 "InChI=1S/C16H17N5O/c1-2-6-17-12(3-1)10-22-13-5-8-21(9-13)16-14-4-7-18-15(14)19-11-20-16/h1-4,6-7,11,13H,5,8-10H2,(H,18,19,20)/t13-/m1/s1" A1PRH InChIKey InChI 1.06 UXPGWXXKDDZZHI-CYBMUJFWSA-N A1PRH SMILES_CANONICAL CACTVS 3.385 "C1CN(C[C@@H]1OCc2ccccn2)c3ncnc4[nH]ccc34" A1PRH SMILES CACTVS 3.385 "C1CN(C[CH]1OCc2ccccn2)c3ncnc4[nH]ccc34" A1PRH SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1ccnc(c1)CO[C@@H]2CCN(C2)c3c4cc[nH]c4ncn3" A1PRH SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccnc(c1)COC2CCN(C2)c3c4cc[nH]c4ncn3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1PRH "SYSTEMATIC NAME" ACDLabs 14.52 "4-{(3R)-3-[(pyridin-2-yl)methoxy]pyrrolidin-1-yl}-7H-pyrrolo[2,3-d]pyrimidine" A1PRH "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "4-[(3~{R})-3-(pyridin-2-ylmethoxy)pyrrolidin-1-yl]-7~{H}-pyrrolo[2,3-d]pyrimidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1PRH "Create component" 2026-09-04 RCSB A1PRH "Initial release" 2026-11-04 RCSB #