data_A1PSD # _chem_comp.id A1PSD _chem_comp.name "1-[(7-fluoro-9H-pyrimido[4,5-b]indol-4-yl)amino]piperidin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H14 F N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-09-04 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 299.303 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1PSD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15DD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1PSD C13 C1 C 0 1 Y N N N N N -48.603 -29.255 3.431 -2.044 -1.531 -0.009 C13 A1PSD 1 A1PSD C15 C2 C 0 1 Y N N N N N -46.431 -29.395 4.897 -0.809 0.792 0.115 C15 A1PSD 2 A1PSD C11 C3 C 0 1 Y N N N N N -50.594 -29.024 4.779 -4.435 -1.347 -0.074 C11 A1PSD 3 A1PSD C12 C4 C 0 1 Y N N N N N -49.994 -29.114 3.523 -3.286 -2.126 -0.068 C12 A1PSD 4 A1PSD C1 C5 C 0 1 N N N N N N -43.646 -31.379 2.268 3.242 -0.452 -0.954 C1 A1PSD 5 A1PSD C10 C6 C 0 1 Y N N N N N -49.862 -29.031 5.963 -4.348 0.030 -0.020 C10 A1PSD 6 A1PSD C14 C7 C 0 1 Y N N N N N -47.831 -29.277 4.604 -1.943 -0.143 0.046 C14 A1PSD 7 A1PSD C2 C8 C 0 1 N N N N N N -42.429 -31.788 1.435 4.733 -0.589 -1.069 C2 A1PSD 8 A1PSD C3 C9 C 0 1 N N N N N N -42.249 -30.916 0.182 5.358 -0.662 0.326 C3 A1PSD 9 A1PSD C4 C10 C 0 1 N N N N N N -42.267 -29.433 0.540 4.587 -1.700 1.150 C4 A1PSD 10 A1PSD C5 C11 C 0 1 N N N N N N -43.596 -29.071 1.200 3.174 -1.173 1.404 C5 A1PSD 11 A1PSD C6 C12 C 0 1 Y N N N N N -45.232 -29.563 4.190 0.583 0.647 0.151 C6 A1PSD 12 A1PSD C7 C13 C 0 1 Y N N N N N -44.073 -29.529 6.175 0.780 2.943 0.242 C7 A1PSD 13 A1PSD C8 C14 C 0 1 Y N N N N N -46.301 -29.321 6.298 -1.356 2.084 0.147 C8 A1PSD 14 A1PSD C9 C15 C 0 1 Y N N N N N -48.483 -29.150 5.864 -3.104 0.647 0.041 C9 A1PSD 15 A1PSD F1 F1 F 0 1 N N N N N N -51.925 -28.919 4.850 -5.647 -1.941 -0.133 F1 A1PSD 16 A1PSD N1 N1 N 0 1 N N N N N N -44.111 -30.115 2.103 2.560 -0.733 0.157 N1 A1PSD 17 A1PSD N2 N2 N 0 1 N N N N N N -45.231 -29.674 2.810 1.165 -0.607 0.121 N2 A1PSD 18 A1PSD N3 N3 N 0 1 Y N N N N N -44.056 -29.618 4.853 1.333 1.745 0.214 N3 A1PSD 19 A1PSD N4 N4 N 0 1 Y N N N N N -45.130 -29.384 6.971 -0.523 3.123 0.211 N4 A1PSD 20 A1PSD N5 N5 N 0 1 Y N N N N N -47.542 -29.186 6.883 -2.724 1.978 0.102 N5 A1PSD 21 A1PSD O1 O1 O 0 1 N N N N N N -44.145 -32.195 3.055 2.625 -0.061 -1.922 O1 A1PSD 22 A1PSD H14 H1 H 0 1 N N N N N N -48.128 -29.346 2.465 -1.152 -2.139 0.000 H14 A1PSD 23 A1PSD H13 H2 H 0 1 N N N N N N -50.597 -29.075 2.628 -3.365 -3.203 -0.111 H13 A1PSD 24 A1PSD H12 H3 H 0 1 N N N N N N -50.349 -28.947 6.923 -5.248 0.628 -0.025 H12 A1PSD 25 A1PSD H2 H4 H 0 1 N N N N N N -42.553 -32.835 1.121 4.971 -1.498 -1.621 H2 A1PSD 26 A1PSD H1 H5 H 0 1 N N N N N N -41.528 -31.697 2.060 5.135 0.273 -1.600 H1 A1PSD 27 A1PSD H3 H6 H 0 1 N N N N N N -43.067 -31.126 -0.523 6.403 -0.961 0.245 H3 A1PSD 28 A1PSD H4 H7 H 0 1 N N N N N N -41.286 -31.160 -0.291 5.291 0.313 0.810 H4 A1PSD 29 A1PSD H5 H8 H 0 1 N N N N N N -41.444 -29.216 1.236 4.533 -2.638 0.597 H5 A1PSD 30 A1PSD H6 H9 H 0 1 N N N N N N -42.140 -28.836 -0.375 5.093 -1.862 2.101 H6 A1PSD 31 A1PSD H8 H10 H 0 1 N N N N N N -43.455 -28.147 1.781 2.569 -1.963 1.848 H8 A1PSD 32 A1PSD H7 H11 H 0 1 N N N N N N -44.341 -28.897 0.409 3.223 -0.330 2.093 H7 A1PSD 33 A1PSD H10 H12 H 0 1 N N N N N N -43.113 -29.580 6.666 1.422 3.809 0.294 H10 A1PSD 34 A1PSD H9 H13 H 0 1 N N N N N N -45.444 -28.763 2.456 0.608 -1.400 0.075 H9 A1PSD 35 A1PSD H11 H14 H 0 1 N N N N N N -47.730 -29.125 7.863 -3.338 2.729 0.112 H11 A1PSD 36 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1PSD C3 C4 SING N N 1 A1PSD C3 C2 SING N N 2 A1PSD C4 C5 SING N N 3 A1PSD C5 N1 SING N N 4 A1PSD C2 C1 SING N N 5 A1PSD N1 C1 SING N N 6 A1PSD N1 N2 SING N N 7 A1PSD C1 O1 DOUB N N 8 A1PSD N2 C6 SING N N 9 A1PSD C13 C12 DOUB Y N 10 A1PSD C13 C14 SING Y N 11 A1PSD C12 C11 SING Y N 12 A1PSD C6 N3 DOUB Y N 13 A1PSD C6 C15 SING Y N 14 A1PSD C14 C15 SING Y N 15 A1PSD C14 C9 DOUB Y N 16 A1PSD C11 F1 SING N N 17 A1PSD C11 C10 DOUB Y N 18 A1PSD N3 C7 SING Y N 19 A1PSD C15 C8 DOUB Y N 20 A1PSD C9 C10 SING Y N 21 A1PSD C9 N5 SING Y N 22 A1PSD C7 N4 DOUB Y N 23 A1PSD C8 N5 SING Y N 24 A1PSD C8 N4 SING Y N 25 A1PSD C13 H14 SING N N 26 A1PSD C12 H13 SING N N 27 A1PSD C10 H12 SING N N 28 A1PSD C2 H2 SING N N 29 A1PSD C2 H1 SING N N 30 A1PSD C3 H3 SING N N 31 A1PSD C3 H4 SING N N 32 A1PSD C4 H5 SING N N 33 A1PSD C4 H6 SING N N 34 A1PSD C5 H8 SING N N 35 A1PSD C5 H7 SING N N 36 A1PSD C7 H10 SING N N 37 A1PSD N2 H9 SING N N 38 A1PSD N5 H11 SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1PSD SMILES ACDLabs 14.52 "Fc1ccc2c3c(ncnc3[NH]c2c1)NN1CCCCC1=O" A1PSD InChI InChI 1.06 "InChI=1S/C15H14FN5O/c16-9-4-5-10-11(7-9)19-14-13(10)15(18-8-17-14)20-21-6-2-1-3-12(21)22/h4-5,7-8H,1-3,6H2,(H2,17,18,19,20)" A1PSD InChIKey InChI 1.06 YAWBNOXEIYVCCS-UHFFFAOYSA-N A1PSD SMILES_CANONICAL CACTVS 3.385 "Fc1ccc2c([nH]c3ncnc(NN4CCCCC4=O)c23)c1" A1PSD SMILES CACTVS 3.385 "Fc1ccc2c([nH]c3ncnc(NN4CCCCC4=O)c23)c1" A1PSD SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc2c(cc1F)[nH]c3c2c(ncn3)NN4CCCCC4=O" A1PSD SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc2c(cc1F)[nH]c3c2c(ncn3)NN4CCCCC4=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1PSD "SYSTEMATIC NAME" ACDLabs 14.52 "1-[(7-fluoro-9H-pyrimido[4,5-b]indol-4-yl)amino]piperidin-2-one" A1PSD "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "1-[(7-fluoranyl-9~{H}-pyrimido[4,5-b]indol-4-yl)amino]piperidin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1PSD "Create component" 2026-09-04 RCSB A1PSD "Initial release" 2026-11-04 RCSB #