data_A2U # _chem_comp.id A2U _chem_comp.name S-Ethyl-CoA _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H40 N7 O16 P3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-07-17 _chem_comp.pdbx_modified_date 2024-04-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 795.587 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A2U _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PTZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A2U C10 C1 C 0 1 N N N N N N 207.481 201.128 201.658 7.389 -1.795 0.382 C10 A2U 1 A2U C17 C2 C 0 1 N N N N N N 211.473 201.076 200.091 3.796 -2.185 2.214 C17 A2U 2 A2U C01 C3 C 0 1 N N N N N N 208.123 209.031 198.043 13.308 6.614 -0.534 C01 A2U 3 A2U C02 C4 C 0 1 N N N N N N 207.783 208.641 199.476 12.337 5.742 0.264 C02 A2U 4 A2U C04 C5 C 0 1 N N N N N N 207.324 206.316 201.268 10.752 3.389 0.378 C04 A2U 5 A2U C05 C6 C 0 1 N N N N N N 207.778 204.859 201.611 10.276 2.111 -0.315 C05 A2U 6 A2U C07 C7 C 0 1 N N N N N N 206.406 203.095 202.854 8.809 0.226 0.166 C07 A2U 7 A2U C09 C8 C 0 1 N N N N N N 206.370 202.222 201.608 7.865 -0.517 1.076 C09 A2U 8 A2U C12 C9 C 0 1 N N N N N N 209.909 201.238 202.472 5.922 -3.680 0.863 C12 A2U 9 A2U C14 C10 C 0 1 N N R N N N 211.294 201.978 202.466 4.902 -4.373 1.731 C14 A2U 10 A2U C16 C11 C 0 1 N N N N N N 212.262 201.430 201.402 3.581 -3.603 1.679 C16 A2U 11 A2U C18 C12 C 0 1 N N N N N N 213.326 202.501 201.083 2.539 -4.320 2.540 C18 A2U 12 A2U C19 C13 C 0 1 N N N N N N 212.948 200.149 201.934 3.087 -3.533 0.233 C19 A2U 13 A2U C29 C14 C 0 1 N N N N N N 218.269 201.224 205.165 -4.261 -1.033 -0.999 C29 A2U 14 A2U C30 C15 C 0 1 N N R N N N 217.716 202.005 206.366 -5.075 -0.550 0.204 C30 A2U 15 A2U C32 C16 C 0 1 N N S N N N 215.347 202.535 206.041 -5.586 1.681 -0.148 C32 A2U 16 A2U C34 C17 C 0 1 Y N N N N N 212.836 202.715 205.982 -5.229 3.271 1.778 C34 A2U 17 A2U C36 C18 C 0 1 Y N N N N N 212.437 204.558 207.059 -5.899 5.151 0.930 C36 A2U 18 A2U C37 C19 C 0 1 Y N N N N N 211.936 205.712 207.715 -6.270 6.470 0.618 C37 A2U 19 A2U C40 C20 C 0 1 Y N N N N N 214.095 206.324 208.236 -6.869 5.765 -1.497 C40 A2U 20 A2U C42 C21 C 0 1 Y N N N N N 213.795 204.359 207.028 -6.050 4.167 -0.062 C42 A2U 21 A2U C43 C22 C 0 1 N N R N N N 215.462 201.684 207.113 -6.961 0.976 -0.028 C43 A2U 22 A2U C45 C23 C 0 1 N N S N N N 217.018 201.204 207.152 -6.573 -0.517 -0.157 C45 A2U 23 A2U N06 N1 N 0 1 N N N N N N 207.106 204.383 202.834 9.358 1.389 0.569 N06 A2U 24 A2U N11 N2 N 0 1 N N N N N N 208.783 201.785 201.674 6.470 -2.517 1.267 N11 A2U 25 A2U N33 N3 N 0 1 Y N N N N N 214.016 203.188 206.360 -5.620 2.993 0.502 N33 A2U 26 A2U N35 N4 N 0 1 Y N N N N N 211.860 203.528 206.400 -5.393 4.538 2.027 N35 A2U 27 A2U N38 N5 N 0 1 N N N N N N 210.487 205.971 207.769 -6.143 7.482 1.554 N38 A2U 28 A2U N39 N6 N 0 1 Y N N N N N 212.788 206.556 208.283 -6.745 6.724 -0.597 N39 A2U 29 A2U N41 N7 N 0 1 Y N N N N N 214.610 205.249 207.627 -6.535 4.516 -1.249 N41 A2U 30 A2U O08 O1 O 0 1 N N N N N N 205.867 202.721 203.849 9.075 -0.223 -0.929 O08 A2U 31 A2U O13 O2 O 0 1 N N N N N N 209.766 200.239 203.113 6.248 -4.169 -0.197 O13 A2U 32 A2U O15 O3 O 0 1 N N N N N N 211.047 203.353 202.174 4.696 -5.704 1.253 O15 A2U 33 A2U O20 O4 O 0 1 N N N N N N 214.275 200.475 202.314 1.853 -2.814 0.185 O20 A2U 34 A2U O22 O5 O 0 1 N N N N N N 216.002 198.522 202.157 1.921 -1.600 -2.146 O22 A2U 35 A2U O23 O6 O 0 1 N N N N N N 215.084 199.455 200.061 0.787 -3.837 -1.861 O23 A2U 36 A2U O24 O7 O 0 1 N N N N N N 216.796 200.878 201.394 -0.354 -1.827 -0.848 O24 A2U 37 A2U O26 O8 O 0 1 N N N N N N 218.831 202.229 202.177 -2.134 -2.962 -2.231 O26 A2U 38 A2U O27 O9 O 0 1 N N N N N N 218.862 199.800 202.530 -1.568 -0.572 -2.813 O27 A2U 39 A2U O28 O10 O 0 1 N N N N N N 217.358 201.269 204.068 -2.890 -1.171 -0.621 O28 A2U 40 A2U O31 O11 O 0 1 N N N N N N 216.725 203.172 205.905 -4.689 0.790 0.549 O31 A2U 41 A2U O44 O12 O 0 1 N N N N N N 215.171 202.315 208.339 -7.559 1.239 1.243 O44 A2U 42 A2U O46 O13 O 0 1 N N N N N N 217.526 201.290 208.483 -7.326 -1.311 0.762 O46 A2U 43 A2U O48 O14 O 0 1 N N N N N N 219.384 200.666 210.169 -9.021 -3.149 1.575 O48 A2U 44 A2U O49 O15 O 0 1 N N N N N N 219.616 199.917 207.821 -9.168 -2.158 -0.742 O49 A2U 45 A2U O50 O16 O 0 1 N N N N N N 219.900 202.298 208.396 -7.245 -3.725 -0.276 O50 A2U 46 A2U P21 P1 P 0 1 N N N N N N 215.543 199.786 201.468 1.046 -2.548 -1.183 P21 A2U 47 A2U P25 P2 P 0 1 N N N N N N 217.998 201.030 202.534 -1.745 -1.662 -1.641 P25 A2U 48 A2U P47 P3 P 0 1 N N N N N N 219.142 201.040 208.721 -8.211 -2.577 0.307 P47 A2U 49 A2U S03 S1 S 0 1 N N N N N N 208.150 206.876 199.732 11.889 4.283 -0.716 S03 A2U 50 A2U H1 H1 H 0 1 N N N N N N 207.362 200.520 202.567 6.874 -1.537 -0.543 H1 A2U 51 A2U H2 H2 H 0 1 N N N N N N 207.404 200.481 200.772 8.247 -2.427 0.156 H2 A2U 52 A2U H3 H3 H 0 1 N N N N N N 210.713 200.313 200.314 2.834 -1.680 2.301 H3 A2U 53 A2U H4 H4 H 0 1 N N N N N N 210.981 201.980 199.704 4.271 -2.235 3.194 H4 A2U 54 A2U H5 H5 H 0 1 N N N N N N 212.172 200.687 199.336 4.436 -1.632 1.527 H5 A2U 55 A2U H6 H6 H 0 1 N N N N N N 207.901 210.097 197.890 14.206 6.041 -0.763 H6 A2U 56 A2U H7 H7 H 0 1 N N N N N N 209.192 208.849 197.857 12.833 6.932 -1.462 H7 A2U 57 A2U H8 H8 H 0 1 N N N N N N 207.522 208.428 197.347 13.577 7.491 0.055 H8 A2U 58 A2U H9 H9 H 0 1 N N N N N N 208.384 209.245 200.172 12.812 5.425 1.192 H9 A2U 59 A2U H10 H10 H 0 1 N N N N N N 206.714 208.823 199.661 11.438 6.315 0.493 H10 A2U 60 A2U H11 H11 H 0 1 N N N N N N 207.596 206.988 202.095 9.894 4.021 0.605 H11 A2U 61 A2U H12 H12 H 0 1 N N N N N N 206.234 206.335 201.124 11.267 3.130 1.304 H12 A2U 62 A2U H13 H13 H 0 1 N N N N N N 207.521 204.193 200.774 9.761 2.369 -1.240 H13 A2U 63 A2U H14 H14 H 0 1 N N N N N N 208.867 204.847 201.768 11.135 1.479 -0.541 H14 A2U 64 A2U H15 H15 H 0 1 N N N N N N 206.527 202.854 200.722 7.006 0.115 1.302 H15 A2U 65 A2U H16 H16 H 0 1 N N N N N N 205.387 201.733 201.540 8.379 -0.776 2.001 H16 A2U 66 A2U H17 H17 H 0 1 N N N N N N 211.754 201.870 203.459 5.263 -4.407 2.759 H17 A2U 67 A2U H18 H18 H 0 1 N N N N N N 213.881 202.752 201.999 1.583 -3.802 2.460 H18 A2U 68 A2U H19 H19 H 0 1 N N N N N N 214.024 202.111 200.327 2.426 -5.347 2.194 H19 A2U 69 A2U H20 H20 H 0 1 N N N N N N 212.832 203.404 200.695 2.865 -4.321 3.580 H20 A2U 70 A2U H21 H21 H 0 1 N N N N N N 212.396 199.767 202.805 3.830 -3.023 -0.380 H21 A2U 71 A2U H22 H22 H 0 1 N N N N N N 212.965 199.382 201.145 2.934 -4.543 -0.148 H22 A2U 72 A2U H23 H23 H 0 1 N N N N N N 218.428 200.176 205.459 -4.645 -1.996 -1.335 H23 A2U 73 A2U H24 H24 H 0 1 N N N N N N 219.227 201.668 204.856 -4.343 -0.307 -1.808 H24 A2U 74 A2U H25 H25 H 0 1 N N N N N N 218.558 202.469 206.901 -4.912 -1.216 1.052 H25 A2U 75 A2U H26 H26 H 0 1 N N N N N N 215.191 201.931 205.135 -5.296 1.779 -1.194 H26 A2U 76 A2U H27 H27 H 0 1 N N N N N N 212.685 201.806 205.419 -4.843 2.546 2.480 H27 A2U 77 A2U H28 H28 H 0 1 N N N N N N 214.766 207.028 208.706 -7.260 6.015 -2.472 H28 A2U 78 A2U H29 H29 H 0 1 N N N N N N 214.837 200.788 206.979 -7.625 1.277 -0.838 H29 A2U 79 A2U H30 H30 H 0 1 N N N N N N 217.051 200.161 206.803 -6.727 -0.864 -1.178 H30 A2U 80 A2U H31 H31 H 0 1 N N N N N N 207.128 204.946 203.660 9.145 1.748 1.445 H31 A2U 81 A2U H32 H32 H 0 1 N N N N N N 208.920 202.618 201.138 6.258 -2.158 2.142 H32 A2U 82 A2U H33 H33 H 0 1 N N N N N N 210.318 206.821 208.269 -5.795 7.284 2.437 H33 A2U 83 A2U H34 H34 H 0 1 N N N N N N 210.129 206.054 206.839 -6.403 8.388 1.327 H34 A2U 84 A2U H35 H35 H 0 1 N N N N N N 210.450 203.712 202.820 4.374 -5.750 0.343 H35 A2U 85 A2U H36 H36 H 0 1 N N N N N N 215.907 197.785 201.565 2.129 -0.736 -1.765 H36 A2U 86 A2U H37 H37 H 0 1 N N N N N N 219.753 200.039 202.303 -1.313 0.306 -2.499 H37 A2U 87 A2U H38 H38 H 0 1 N N N N N N 215.264 201.689 209.048 -7.738 2.175 1.407 H38 A2U 88 A2U H39 H39 H 0 1 N N N N N N 219.783 199.805 210.212 -9.577 -3.914 1.374 H39 A2U 89 A2U H40 H40 H 0 1 N N N N N N 220.517 202.124 207.695 -6.591 -4.048 0.359 H40 A2U 90 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A2U C01 C02 SING N N 1 A2U C02 S03 SING N N 2 A2U S03 C04 SING N N 3 A2U O23 P21 DOUB N N 4 A2U C17 C16 SING N N 5 A2U C18 C16 SING N N 6 A2U C04 C05 SING N N 7 A2U O24 P21 SING N N 8 A2U O24 P25 SING N N 9 A2U C16 C19 SING N N 10 A2U C16 C14 SING N N 11 A2U P21 O22 SING N N 12 A2U P21 O20 SING N N 13 A2U C09 C10 SING N N 14 A2U C09 C07 SING N N 15 A2U C05 N06 SING N N 16 A2U C10 N11 SING N N 17 A2U N11 C12 SING N N 18 A2U C19 O20 SING N N 19 A2U O15 C14 SING N N 20 A2U O26 P25 DOUB N N 21 A2U C14 C12 SING N N 22 A2U C12 O13 DOUB N N 23 A2U O27 P25 SING N N 24 A2U P25 O28 SING N N 25 A2U N06 C07 SING N N 26 A2U C07 O08 DOUB N N 27 A2U O28 C29 SING N N 28 A2U C29 C30 SING N N 29 A2U O31 C32 SING N N 30 A2U O31 C30 SING N N 31 A2U C34 N33 SING Y N 32 A2U C34 N35 DOUB Y N 33 A2U C32 N33 SING N N 34 A2U C32 C43 SING N N 35 A2U N33 C42 SING Y N 36 A2U C30 C45 SING N N 37 A2U N35 C36 SING Y N 38 A2U C42 C36 DOUB Y N 39 A2U C42 N41 SING Y N 40 A2U C36 C37 SING Y N 41 A2U C43 C45 SING N N 42 A2U C43 O44 SING N N 43 A2U C45 O46 SING N N 44 A2U N41 C40 DOUB Y N 45 A2U C37 N38 SING N N 46 A2U C37 N39 DOUB Y N 47 A2U O49 P47 DOUB N N 48 A2U C40 N39 SING Y N 49 A2U O50 P47 SING N N 50 A2U O46 P47 SING N N 51 A2U P47 O48 SING N N 52 A2U C10 H1 SING N N 53 A2U C10 H2 SING N N 54 A2U C17 H3 SING N N 55 A2U C17 H4 SING N N 56 A2U C17 H5 SING N N 57 A2U C01 H6 SING N N 58 A2U C01 H7 SING N N 59 A2U C01 H8 SING N N 60 A2U C02 H9 SING N N 61 A2U C02 H10 SING N N 62 A2U C04 H11 SING N N 63 A2U C04 H12 SING N N 64 A2U C05 H13 SING N N 65 A2U C05 H14 SING N N 66 A2U C09 H15 SING N N 67 A2U C09 H16 SING N N 68 A2U C14 H17 SING N N 69 A2U C18 H18 SING N N 70 A2U C18 H19 SING N N 71 A2U C18 H20 SING N N 72 A2U C19 H21 SING N N 73 A2U C19 H22 SING N N 74 A2U C29 H23 SING N N 75 A2U C29 H24 SING N N 76 A2U C30 H25 SING N N 77 A2U C32 H26 SING N N 78 A2U C34 H27 SING N N 79 A2U C40 H28 SING N N 80 A2U C43 H29 SING N N 81 A2U C45 H30 SING N N 82 A2U N06 H31 SING N N 83 A2U N11 H32 SING N N 84 A2U N38 H33 SING N N 85 A2U N38 H34 SING N N 86 A2U O15 H35 SING N N 87 A2U O22 H36 SING N N 88 A2U O27 H37 SING N N 89 A2U O44 H38 SING N N 90 A2U O48 H39 SING N N 91 A2U O50 H40 SING N N 92 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A2U InChI InChI 1.06 "InChI=1S/C23H40N7O16P3S/c1-4-50-8-7-25-14(31)5-6-26-21(34)18(33)23(2,3)10-43-49(40,41)46-48(38,39)42-9-13-17(45-47(35,36)37)16(32)22(44-13)30-12-29-15-19(24)27-11-28-20(15)30/h11-13,16-18,22,32-33H,4-10H2,1-3H3,(H,25,31)(H,26,34)(H,38,39)(H,40,41)(H2,24,27,28)(H2,35,36,37)/t13-,16-,17-,18+,22+/m1/s1" A2U InChIKey InChI 1.06 YGTAAWZKDDQUQN-RJFKWGFDSA-N A2U SMILES_CANONICAL CACTVS 3.385 "CCSCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)CO[P](O)(=O)O[P](O)(=O)OC[C@H]1O[C@@H]([C@H](O)[C@@H]1O[P](O)(O)=O)n2cnc3c(N)ncnc23" A2U SMILES CACTVS 3.385 "CCSCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O[P](O)(O)=O)n2cnc3c(N)ncnc23" A2U SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCSCCNC(=O)CCNC(=O)[C@@H](C(C)(C)COP(=O)(O)OP(=O)(O)OC[C@@H]1[C@H]([C@H]([C@H](O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)O" A2U SMILES "OpenEye OEToolkits" 2.0.7 "CCSCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)O" # _pdbx_chem_comp_identifier.comp_id A2U _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[[(2~{R},3~{S},4~{R},5~{S})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(3~{R})-4-[[3-(2-ethylsulfanylethylamino)-3-oxidanylidene-propyl]amino]-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-butyl] hydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A2U "Create component" 2023-07-17 PDBE A2U "Initial release" 2024-04-17 RCSB #