ADENOSINE-3'-5'-DIPHOSPHATE
RNA linking
ATOMN
C10 H15 N5 O10 P2
A
0
1999-07-08
2011-06-04
N
REL
427.201
A
A3P
N
N
1AQU
RCSB
P1
P
0
1
N
N
N
4.090
23.888
22.033
3.047
-0.319
-2.419
P1
A3P
1
O1P
O
0
1
N
N
N
4.339
24.834
23.134
2.080
-0.681
-3.479
O1P
A3P
2
O2P
O
0
1
N
N
N
2.805
23.167
22.209
4.314
0.422
-3.080
O2P
A3P
3
O3P
O
0
1
N
Y
N
4.134
24.595
20.729
3.540
-1.653
-1.664
O3P
A3P
4
P2
P
0
1
N
N
N
10.492
20.644
24.788
-2.728
0.073
-3.807
P2
A3P
5
O4P
O
0
1
N
N
N
10.264
19.264
25.205
-2.932
-1.369
-3.549
O4P
A3P
6
O5P
O
0
1
N
N
N
11.781
20.754
24.048
-4.149
0.773
-4.096
O5P
A3P
7
O6P
O
0
1
N
N
N
10.471
21.568
25.947
-1.768
0.259
-5.086
O6P
A3P
8
O5*
O
0
1
N
N
N
9.298
21.064
23.779
-2.045
0.758
-2.520
O5'
A3P
9
C5*
C
0
1
N
N
N
7.941
21.288
24.183
-0.794
0.097
-2.316
C5'
A3P
10
C4*
C
0
1
N
N
R
7.078
21.449
22.912
-0.090
0.703
-1.100
C4'
A3P
11
O4*
O
0
1
N
N
N
6.948
20.124
22.293
-0.888
0.516
0.088
O4'
A3P
12
C3*
C
0
1
N
N
S
5.639
21.942
23.164
1.229
-0.045
-0.812
C3'
A3P
13
O3*
O
0
1
N
N
N
5.251
22.785
22.043
2.340
0.666
-1.361
O3'
A3P
14
C2*
C
0
1
N
N
R
4.889
20.606
23.288
1.314
-0.077
0.732
C2'
A3P
15
O2*
O
0
1
N
N
N
3.481
20.642
23.168
2.481
0.612
1.183
O2'
A3P
16
C1*
C
0
1
N
N
R
5.564
19.791
22.177
0.033
0.654
1.191
C1'
A3P
17
N9
N
0
1
Y
N
N
5.352
18.337
22.289
-0.512
0.021
2.394
N9
A3P
18
C8
C
0
1
Y
N
N
5.639
17.490
23.342
-1.396
-1.015
2.429
C8
A3P
19
N7
N
0
1
Y
N
N
5.325
16.226
23.132
-1.667
-1.326
3.663
N7
A3P
20
C5
C
0
1
Y
N
N
4.791
16.227
21.850
-0.972
-0.515
4.496
C5
A3P
21
C6
C
0
1
Y
N
N
4.257
15.187
21.019
-0.873
-0.382
5.891
C6
A3P
22
N6
N
0
1
N
N
N
4.182
13.908
21.396
-1.588
-1.215
6.734
N6
A3P
23
N1
N
0
1
Y
N
N
3.801
15.535
19.768
-0.072
0.558
6.383
N1
A3P
24
C2
C
0
1
Y
N
N
3.870
16.831
19.368
0.612
1.357
5.586
C2
A3P
25
N3
N
0
1
Y
N
N
4.350
17.901
20.061
0.547
1.273
4.274
N3
A3P
26
C4
C
0
1
Y
N
N
4.798
17.526
21.301
-0.226
0.362
3.691
C4
A3P
27
2HOP
H
0
0
N
N
N
2.644
22.556
21.498
4.708
-0.200
-3.705
HOP2
A3P
28
3HOP
H
0
0
N
N
N
3.973
23.984
20.018
4.167
-1.373
-0.983
HOP3
A3P
29
5HOP
H
0
0
N
N
N
11.929
21.652
23.776
-4.523
0.335
-4.873
HOP5
A3P
30
6HOP
H
0
0
N
N
N
10.619
22.466
25.675
-1.661
1.211
-5.220
HOP6
A3P
31
1H5*
H
0
0
N
N
N
7.558
20.492
24.863
-0.168
0.223
-3.199
H5'1
A3P
32
2H5*
H
0
0
N
N
N
7.838
22.148
24.884
-0.968
-0.964
-2.143
H5'2
A3P
33
H4*
H
0
1
N
N
N
7.593
22.212
22.284
0.103
1.763
-1.265
H4'
A3P
34
H3*
H
0
1
N
N
N
5.451
22.581
24.058
1.189
-1.058
-1.214
H3'
A3P
35
H2*
H
0
1
N
N
N
4.967
20.185
24.317
1.315
-1.105
1.093
H2'
A3P
36
*HO2
H
0
0
N
N
N
3.017
19.816
23.244
2.481
0.560
2.149
HO2'
A3P
37
H1*
H
0
1
N
N
N
5.128
20.042
21.181
0.244
1.707
1.379
H1'
A3P
38
H8
H
0
1
N
N
N
6.093
17.805
24.296
-1.811
-1.505
1.561
H8
A3P
39
1HN6
H
0
0
N
N
N
3.802
13.168
20.805
-1.508
-1.116
7.696
HN61
A3P
40
2HN6
H
0
0
N
N
N
3.670
13.882
22.278
-2.171
-1.895
6.364
HN62
A3P
41
H2
H
0
1
N
N
N
3.488
17.040
18.354
1.251
2.108
6.027
H2
A3P
42
doub
N
N
1
sing
N
N
2
sing
N
N
3
sing
N
N
4
sing
N
N
5
sing
N
N
6
doub
N
N
7
sing
N
N
8
sing
N
N
9
sing
N
N
10
sing
N
N
11
sing
N
N
12
sing
N
N
13
sing
N
N
14
sing
N
N
15
sing
N
N
16
sing
N
N
17
sing
N
N
18
sing
N
N
19
sing
N
N
20
sing
N
N
21
sing
N
N
22
sing
N
N
23
sing
N
N
24
sing
N
N
25
sing
N
N
26
sing
N
N
27
sing
N
N
28
sing
N
N
29
sing
Y
N
30
sing
Y
N
31
doub
Y
N
32
sing
N
N
33
sing
Y
N
34
sing
Y
N
35
doub
Y
N
36
sing
N
N
37
doub
Y
N
38
sing
N
N
39
sing
N
N
40
sing
Y
N
41
doub
Y
N
42
sing
N
N
43
sing
Y
N
44
O=P(O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3OP(=O)(O)O
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O[P](O)(O)=O)[C@H]3O
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH](O[P](O)(O)=O)[CH]3O
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)OP(=O)(O)O)O)N
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)O)OP(=O)(O)O)O)N
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-6(16)7(25-27(20,21)22)4(24-10)1-23-26(17,18)19/h2-4,6-7,10,16H,1H2,(H2,11,12,13)(H2,17,18,19)(H2,20,21,22)/t4-,6-,7-,10-/m1/s1
WHTCPDAXWFLDIH-KQYNXXCUSA-N
adenosine 3',5'-bis(dihydrogen phosphate)
[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-2-(phosphonooxymethyl)oxolan-3-yl] dihydrogen phosphate
RCSB
RCSB