data_A3Z # _chem_comp.id A3Z _chem_comp.name "~{S}-[2-[3-[[(2~{R})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] (~{E})-but-2-enethioate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H27 N2 O8 P S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-07-17 _chem_comp.pdbx_modified_date 2023-11-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 426.422 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A3Z _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PS2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A3Z C1 C1 C 0 1 N N N N N N 144.075 107.291 101.007 -7.878 -0.478 0.327 C1 A3Z 1 A3Z C2 C2 C 0 1 N N N N N N 144.386 108.210 102.175 -9.261 -0.813 -0.046 C2 A3Z 2 A3Z C3 C3 C 0 1 N N N N N N 145.564 108.210 102.726 -10.164 -1.058 0.900 C3 A3Z 3 A3Z C4 C4 C 0 1 N N N N N N 145.820 109.167 103.876 -11.580 -1.402 0.518 C4 A3Z 4 A3Z O5 O1 O 0 1 N N N N N N 144.926 106.780 100.350 -7.560 -0.425 1.500 O5 A3Z 5 A3Z C28 C5 C 0 1 N N N N N N 137.338 101.261 101.008 4.876 0.043 0.038 C28 A3Z 6 A3Z C29 C6 C 0 1 N N N N N N 138.801 100.986 101.413 4.715 1.083 1.148 C29 A3Z 7 A3Z C30 C7 C 0 1 N N N N N N 139.482 102.280 101.905 3.630 0.623 2.125 C30 A3Z 8 A3Z C31 C8 C 0 1 N N N N N N 138.841 99.992 102.584 6.040 1.241 1.896 C31 A3Z 9 A3Z C32 C9 C 0 1 N N R N N N 139.603 100.376 100.225 4.312 2.426 0.535 C32 A3Z 10 A3Z C34 C10 C 0 1 N N N N N N 139.508 101.112 98.884 3.083 2.240 -0.317 C34 A3Z 11 A3Z C37 C11 C 0 1 N N N N N N 140.657 101.431 96.640 0.729 1.663 -0.574 C37 A3Z 12 A3Z C38 C12 C 0 1 N N N N N N 141.648 102.567 96.486 -0.471 1.352 0.322 C38 A3Z 13 A3Z C39 C13 C 0 1 N N N N N N 141.372 103.909 97.118 -1.677 1.068 -0.535 C39 A3Z 14 A3Z C42 C14 C 0 1 N N N N N N 142.465 105.947 98.116 -4.031 0.491 -0.792 C42 A3Z 15 A3Z C43 C15 C 0 1 N N N N N N 141.961 105.688 99.527 -5.231 0.179 0.104 C43 A3Z 16 A3Z N36 N1 N 0 1 N N N N N N 140.600 100.864 97.971 1.902 1.939 0.259 N36 A3Z 17 A3Z N41 N2 N 0 1 N N N N N N 142.559 104.659 97.478 -2.858 0.767 0.041 N41 A3Z 18 A3Z O23 O2 O 0 1 N N N N N N 134.938 100.224 103.887 6.785 -2.308 -1.221 O23 A3Z 19 A3Z O25 O3 O 0 1 N N N N N N 135.312 99.132 101.623 4.316 -2.814 -1.099 O25 A3Z 20 A3Z O26 O4 O 0 1 N N N N N N 134.059 101.272 101.642 5.784 -3.784 0.711 O26 A3Z 21 A3Z O27 O5 O 0 1 N N N N N N 136.562 101.354 102.161 5.252 -1.211 0.611 O27 A3Z 22 A3Z O33 O6 O 0 1 N N N N N N 139.216 99.049 99.924 5.382 2.920 -0.274 O33 A3Z 23 A3Z O35 O7 O 0 1 N N N N N N 138.606 101.831 98.594 3.156 2.362 -1.522 O35 A3Z 24 A3Z O40 O8 O 0 1 N N N N N N 140.262 104.298 97.266 -1.586 1.111 -1.744 O40 A3Z 25 A3Z P24 P1 P 0 1 N N N N N N 135.181 100.487 102.281 5.508 -2.535 -0.268 P24 A3Z 26 A3Z S44 S1 S 0 1 N N N N N N 142.312 107.038 100.678 -6.680 -0.161 -0.926 S44 A3Z 27 A3Z H1 H1 H 0 1 N N N N N N 143.620 108.871 102.553 -9.543 -0.861 -1.087 H1 A3Z 28 A3Z H2 H2 H 0 1 N N N N N N 146.340 107.546 102.374 -9.881 -1.011 1.941 H2 A3Z 29 A3Z H3 H3 H 0 1 N N N N N N 146.854 109.047 104.230 -12.170 -1.567 1.420 H3 A3Z 30 A3Z H4 H4 H 0 1 N N N N N N 145.668 110.201 103.533 -12.013 -0.579 -0.052 H4 A3Z 31 A3Z H5 H5 H 0 1 N N N N N N 145.123 108.947 104.698 -11.584 -2.306 -0.090 H5 A3Z 32 A3Z H6 H6 H 0 1 N N N N N N 137.281 102.206 100.447 3.931 -0.070 -0.494 H6 A3Z 33 A3Z H7 H7 H 0 1 N N N N N N 136.968 100.438 100.379 5.648 0.371 -0.658 H7 A3Z 34 A3Z H8 H8 H 0 1 N N N N N N 138.908 102.701 102.743 3.967 -0.273 2.646 H8 A3Z 35 A3Z H9 H9 H 0 1 N N N N N N 140.505 102.052 102.240 3.435 1.413 2.850 H9 A3Z 36 A3Z H10 H10 H 0 1 N N N N N N 139.520 103.010 101.083 2.716 0.401 1.574 H10 A3Z 37 A3Z H11 H11 H 0 1 N N N N N N 138.279 100.404 103.435 6.798 1.627 1.214 H11 A3Z 38 A3Z H12 H12 H 0 1 N N N N N N 138.387 99.040 102.272 5.909 1.937 2.724 H12 A3Z 39 A3Z H13 H13 H 0 1 N N N N N N 139.885 99.820 102.883 6.358 0.272 2.281 H13 A3Z 40 A3Z H14 H14 H 0 1 N N N N N N 140.662 100.375 100.521 4.098 3.139 1.330 H14 A3Z 41 A3Z H15 H15 H 0 1 N N N N N N 139.657 101.810 96.384 0.934 0.808 -1.218 H15 A3Z 42 A3Z H16 H16 H 0 1 N N N N N N 140.937 100.632 95.937 0.507 2.536 -1.189 H16 A3Z 43 A3Z H17 H17 H 0 1 N N N N N N 142.603 102.212 96.902 -0.249 0.479 0.936 H17 A3Z 44 A3Z H18 H18 H 0 1 N N N N N N 141.761 102.743 95.406 -0.675 2.207 0.966 H18 A3Z 45 A3Z H19 H19 H 0 1 N N N N N N 143.453 106.430 98.147 -3.826 -0.364 -1.436 H19 A3Z 46 A3Z H20 H20 H 0 1 N N N N N N 141.759 106.591 97.572 -4.253 1.363 -1.407 H20 A3Z 47 A3Z H21 H21 H 0 1 N N N N N N 140.872 105.540 99.486 -5.009 -0.693 0.718 H21 A3Z 48 A3Z H22 H22 H 0 1 N N N N N N 142.441 104.774 99.906 -5.436 1.035 0.748 H22 A3Z 49 A3Z H23 H23 H 0 1 N N N N N N 141.350 100.275 98.272 1.829 1.904 1.226 H23 A3Z 50 A3Z H24 H24 H 0 1 N N N N N N 143.461 104.275 97.280 -2.931 0.732 1.008 H24 A3Z 51 A3Z H25 H25 H 0 1 N N N N N N 134.932 99.290 104.058 7.605 -2.120 -0.743 H25 A3Z 52 A3Z H26 H26 H 0 1 N N N N N N 133.661 100.753 100.953 5.947 -4.617 0.248 H26 A3Z 53 A3Z H27 H27 H 0 1 N N N N N N 139.249 98.522 100.714 5.626 2.335 -1.003 H27 A3Z 54 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A3Z C38 C37 SING N N 1 A3Z C38 C39 SING N N 2 A3Z C37 N36 SING N N 3 A3Z C39 O40 DOUB N N 4 A3Z C39 N41 SING N N 5 A3Z N41 C42 SING N N 6 A3Z N36 C34 SING N N 7 A3Z C42 C43 SING N N 8 A3Z O35 C34 DOUB N N 9 A3Z C34 C32 SING N N 10 A3Z C43 S44 SING N N 11 A3Z O33 C32 SING N N 12 A3Z C32 C29 SING N N 13 A3Z O5 C1 DOUB N N 14 A3Z S44 C1 SING N N 15 A3Z C1 C2 SING N N 16 A3Z C28 C29 SING N N 17 A3Z C28 O27 SING N N 18 A3Z C29 C30 SING N N 19 A3Z C29 C31 SING N N 20 A3Z O25 P24 DOUB N N 21 A3Z O26 P24 SING N N 22 A3Z O27 P24 SING N N 23 A3Z C2 C3 DOUB N E 24 A3Z P24 O23 SING N N 25 A3Z C3 C4 SING N N 26 A3Z C2 H1 SING N N 27 A3Z C3 H2 SING N N 28 A3Z C4 H3 SING N N 29 A3Z C4 H4 SING N N 30 A3Z C4 H5 SING N N 31 A3Z C28 H6 SING N N 32 A3Z C28 H7 SING N N 33 A3Z C30 H8 SING N N 34 A3Z C30 H9 SING N N 35 A3Z C30 H10 SING N N 36 A3Z C31 H11 SING N N 37 A3Z C31 H12 SING N N 38 A3Z C31 H13 SING N N 39 A3Z C32 H14 SING N N 40 A3Z C37 H15 SING N N 41 A3Z C37 H16 SING N N 42 A3Z C38 H17 SING N N 43 A3Z C38 H18 SING N N 44 A3Z C42 H19 SING N N 45 A3Z C42 H20 SING N N 46 A3Z C43 H21 SING N N 47 A3Z C43 H22 SING N N 48 A3Z N36 H23 SING N N 49 A3Z N41 H24 SING N N 50 A3Z O23 H25 SING N N 51 A3Z O26 H26 SING N N 52 A3Z O33 H27 SING N N 53 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A3Z InChI InChI 1.06 "InChI=1S/C15H27N2O8PS/c1-4-5-12(19)27-9-8-16-11(18)6-7-17-14(21)13(20)15(2,3)10-25-26(22,23)24/h4-5,13,20H,6-10H2,1-3H3,(H,16,18)(H,17,21)(H2,22,23,24)/b5-4+/t13-/m0/s1" A3Z InChIKey InChI 1.06 NQHWDUVVQOKJBX-IHVVCDCBSA-N A3Z SMILES_CANONICAL CACTVS 3.385 "C/C=C/C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)CO[P](O)(O)=O" A3Z SMILES CACTVS 3.385 "CC=CC(=O)SCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(O)=O" A3Z SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C/C=C/C(=O)SCCNC(=O)CCNC(=O)[C@@H](C(C)(C)COP(=O)(O)O)O" A3Z SMILES "OpenEye OEToolkits" 2.0.7 "CC=CC(=O)SCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)O)O" # _pdbx_chem_comp_identifier.comp_id A3Z _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{S}-[2-[3-[[(2~{R})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] (~{E})-but-2-enethioate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A3Z "Create component" 2023-07-17 PDBE A3Z "Initial release" 2023-11-22 RCSB #