data_A44 # _chem_comp.id A44 _chem_comp.name ;2'-O-METHYOXYETHYL-ADENOSINE 5'-MONOPHOSPHATE ; _chem_comp.type "RNA LINKING" _chem_comp.pdbx_type ATOMN _chem_comp.formula "C13 H20 N5 O8 P" _chem_comp.mon_nstd_parent_comp_id A _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-05-12 _chem_comp.pdbx_modified_date 2013-01-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 405.300 _chem_comp.one_letter_code A _chem_comp.three_letter_code A44 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 468D _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A44 P P P 0 1 N N N 14.960 -6.190 18.464 -5.519 0.494 0.099 P A44 1 A44 OP2 OP2 O 0 1 N N N 15.668 -7.398 18.925 -6.462 -0.810 0.157 OP2 A44 2 A44 OP1 OP1 O 0 1 N N N 15.713 -4.957 18.145 -5.372 1.057 1.460 OP1 A44 3 A44 "O5'" "O5'" O 0 1 N N N 14.114 -6.619 17.195 -4.071 0.085 -0.472 "O5'" A44 4 A44 "C5'" "C5'" C 0 1 N N N 13.260 -7.759 17.246 -3.182 -0.795 0.219 "C5'" A44 5 A44 "C4'" "C4'" C 0 1 N N R 12.533 -7.925 15.932 -1.900 -0.970 -0.598 "C4'" A44 6 A44 "O4'" "O4'" O 0 1 N N N 11.688 -6.768 15.680 -1.179 0.273 -0.647 "O4'" A44 7 A44 "C3'" "C3'" C 0 1 N N R 13.402 -7.974 14.688 -0.984 -2.008 0.079 "C3'" A44 8 A44 "O3'" "O3'" O 0 1 N N N 14.058 -9.217 14.476 -0.745 -3.110 -0.798 "O3'" A44 9 A44 "C2'" "C2'" C 0 1 N N R 12.404 -7.624 13.590 0.328 -1.234 0.354 "C2'" A44 10 A44 "O2'" "O2'" O 0 1 N N N 11.558 -8.710 13.235 1.469 -2.048 0.073 "O2'" A44 11 A44 "C1'" "C1'" C 0 1 N N R 11.582 -6.547 14.281 0.227 -0.055 -0.654 "C1'" A44 12 A44 N9 N9 N 0 1 Y N N 12.118 -5.224 13.977 1.026 1.084 -0.196 N9 A44 13 A44 C8 C8 C 0 1 Y N N 12.784 -4.374 14.810 0.574 2.151 0.522 C8 A44 14 A44 N7 N7 N 0 1 Y N N 13.111 -3.234 14.251 1.552 2.976 0.757 N7 A44 15 A44 C5 C5 C 0 1 Y N N 12.637 -3.350 12.958 2.692 2.493 0.206 C5 A44 16 A44 C6 C6 C 0 1 Y N N 12.672 -2.484 11.867 4.023 2.937 0.139 C6 A44 17 A44 N6 N6 N 0 1 N N N 13.208 -1.262 11.896 4.401 4.130 0.730 N6 A44 18 A44 N1 N1 N 0 1 Y N N 12.125 -2.918 10.719 4.910 2.185 -0.504 N1 A44 19 A44 C2 C2 C 0 1 Y N N 11.586 -4.134 10.678 4.558 1.046 -1.070 C2 A44 20 A44 N3 N3 N 0 1 Y N N 11.486 -5.034 11.630 3.324 0.590 -1.033 N3 A44 21 A44 C4 C4 C 0 1 Y N N 12.037 -4.576 12.767 2.369 1.270 -0.407 C4 A44 22 A44 "CA'" "CA'" C 0 1 N N N 10.676 -8.381 12.141 2.029 -2.680 1.226 "CA'" A44 23 A44 "CD'" "CD'" C 0 1 N N N 9.067 -11.740 11.980 5.447 -3.350 -0.105 "CD'" A44 24 A44 "OC'" "OC'" O 0 1 N N N 9.229 -10.349 12.365 4.267 -2.662 0.313 "OC'" A44 25 A44 "CB'" "CB'" C 0 1 N N N 10.135 -9.627 11.491 3.238 -3.520 0.810 "CB'" A44 26 A44 OP3 OP3 O 0 1 N Y N 13.883 -5.763 19.554 -6.186 1.596 -0.868 OP3 A44 27 A44 HOP2 HOP2 H 0 0 N N N 16.601 -7.223 18.965 -6.602 -1.232 -0.702 HOP2 A44 28 A44 "H5'" "H5'" H 0 1 N N N 12.525 -7.627 18.054 -2.938 -0.374 1.194 "H5'" A44 29 A44 "H5''" "H5''" H 0 0 N N N 13.864 -8.657 17.443 -3.662 -1.765 0.352 "H5''" A44 30 A44 "H4'" "H4'" H 0 1 N N N 11.917 -8.835 15.974 -2.146 -1.295 -1.609 "H4'" A44 31 A44 "H3'" "H3'" H 0 1 N N N 14.146 -7.166 14.751 -1.426 -2.354 1.014 "H3'" A44 32 A44 "HO3'" "HO3'" H 0 0 N Y N 14.665 -9.381 15.188 -1.543 -3.595 -1.048 "HO3'" A44 33 A44 "H2'" "H2'" H 0 1 N N N 12.926 -7.207 12.716 0.356 -0.868 1.380 "H2'" A44 34 A44 "H1'" "H1'" H 0 1 N N N 10.535 -6.619 13.952 0.541 -0.372 -1.648 "H1'" A44 35 A44 H8 H8 H 0 1 N N N 13.020 -4.617 15.835 -0.446 2.290 0.848 H8 A44 36 A44 H61 H61 H 0 1 N N N 13.111 -0.834 10.998 3.745 4.670 1.197 H61 A44 37 A44 H62 H62 H 0 1 N N N 12.737 -0.708 12.582 5.324 4.427 0.677 H62 A44 38 A44 H2 H2 H 0 1 N N N 11.171 -4.423 9.724 5.311 0.466 -1.583 H2 A44 39 A44 HCA2 HCA2 H 0 0 N N N 11.233 -7.798 11.393 2.344 -1.920 1.941 HCA2 A44 40 A44 HCA1 HCA1 H 0 0 N N N 9.837 -7.781 12.523 1.280 -3.325 1.687 HCA1 A44 41 A44 HCD1 HCD1 H 0 0 N N N 8.373 -12.235 12.675 5.866 -3.898 0.738 HCD1 A44 42 A44 HCD2 HCD2 H 0 0 N N N 8.663 -11.793 10.958 5.197 -4.048 -0.904 HCD2 A44 43 A44 HCD3 HCD3 H 0 0 N N N 10.043 -12.246 12.015 6.179 -2.628 -0.469 HCD3 A44 44 A44 HCB1 HCB1 H 0 0 N N N 9.595 -9.344 10.576 3.611 -4.073 1.673 HCB1 A44 45 A44 HCB2 HCB2 H 0 0 N N N 10.977 -10.285 11.231 2.942 -4.222 0.030 HCB2 A44 46 A44 HOP3 HOP3 H 0 0 N Y N 13.972 -4.836 19.742 -7.063 1.889 -0.584 HOP3 A44 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A44 C2 N1 DOUB Y N 1 A44 C2 N3 SING Y N 2 A44 N1 C6 SING Y N 3 A44 "CB'" "CA'" SING N N 4 A44 "CB'" "OC'" SING N N 5 A44 N3 C4 DOUB Y N 6 A44 C6 N6 SING N N 7 A44 C6 C5 DOUB Y N 8 A44 "CD'" "OC'" SING N N 9 A44 "CA'" "O2'" SING N N 10 A44 C4 C5 SING Y N 11 A44 C4 N9 SING Y N 12 A44 C5 N7 SING Y N 13 A44 "O2'" "C2'" SING N N 14 A44 "C2'" "C1'" SING N N 15 A44 "C2'" "C3'" SING N N 16 A44 N9 "C1'" SING N N 17 A44 N9 C8 SING Y N 18 A44 N7 C8 DOUB Y N 19 A44 "C1'" "O4'" SING N N 20 A44 "O3'" "C3'" SING N N 21 A44 "C3'" "C4'" SING N N 22 A44 "O4'" "C4'" SING N N 23 A44 "C4'" "C5'" SING N N 24 A44 "O5'" "C5'" SING N N 25 A44 "O5'" P SING N N 26 A44 OP1 P DOUB N N 27 A44 P OP2 SING N N 28 A44 P OP3 SING N N 29 A44 OP2 HOP2 SING N N 30 A44 "C5'" "H5'" SING N N 31 A44 "C5'" "H5''" SING N N 32 A44 "C4'" "H4'" SING N N 33 A44 "C3'" "H3'" SING N N 34 A44 "O3'" "HO3'" SING N N 35 A44 "C2'" "H2'" SING N N 36 A44 "C1'" "H1'" SING N N 37 A44 C8 H8 SING N N 38 A44 N6 H61 SING N N 39 A44 N6 H62 SING N N 40 A44 C2 H2 SING N N 41 A44 "CA'" HCA2 SING N N 42 A44 "CA'" HCA1 SING N N 43 A44 "CD'" HCD1 SING N N 44 A44 "CD'" HCD2 SING N N 45 A44 "CD'" HCD3 SING N N 46 A44 "CB'" HCB1 SING N N 47 A44 "CB'" HCB2 SING N N 48 A44 OP3 HOP3 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A44 SMILES ACDLabs 12.01 "O=P(O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(OCCOC)C3O" A44 InChI InChI 1.03 "InChI=1S/C13H20N5O8P/c1-23-2-3-24-10-9(19)7(4-25-27(20,21)22)26-13(10)18-6-17-8-11(14)15-5-16-12(8)18/h5-7,9-10,13,19H,2-4H2,1H3,(H2,14,15,16)(H2,20,21,22)/t7-,9-,10-,13-/m1/s1" A44 InChIKey InChI 1.03 SZPMFMOOEUYAMU-QYVSTXNMSA-N A44 SMILES_CANONICAL CACTVS 3.370 "COCCO[C@@H]1[C@H](O)[C@@H](CO[P](O)(O)=O)O[C@H]1n2cnc3c(N)ncnc23" A44 SMILES CACTVS 3.370 "COCCO[CH]1[CH](O)[CH](CO[P](O)(O)=O)O[CH]1n2cnc3c(N)ncnc23" A44 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "COCCO[C@@H]1[C@@H]([C@H](O[C@H]1n2cnc3c2ncnc3N)COP(=O)(O)O)O" A44 SMILES "OpenEye OEToolkits" 1.7.6 "COCCOC1C(C(OC1n2cnc3c2ncnc3N)COP(=O)(O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A44 "SYSTEMATIC NAME" ACDLabs 12.01 ;2'-O-(2-methoxyethyl)adenosine 5'-(dihydrogen phosphate) ; A44 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-4-(2-methoxyethoxy)-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A44 "Create component" 1999-05-12 RCSB A44 "Modify descriptor" 2011-06-04 RCSB A44 "Modify component atom id" 2013-01-10 RCSB #