data_A5B # _chem_comp.id A5B _chem_comp.name "alisertib " _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H20 Cl F N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-02-21 _chem_comp.pdbx_modified_date 2016-11-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 518.924 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A5B _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5IA0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A5B C26 C1 C 0 1 N N N -27.946 -5.308 -25.120 -6.712 -0.501 3.252 C26 A5B 1 A5B O2 O1 O 0 1 N N N -27.104 -6.468 -25.249 -7.157 -0.466 1.895 O2 A5B 2 A5B C24 C2 C 0 1 Y N N -26.131 -6.404 -26.204 -6.252 -0.079 0.960 C24 A5B 3 A5B C25 C3 C 0 1 Y N N -26.047 -5.348 -27.124 -4.965 0.260 1.337 C25 A5B 4 A5B C23 C4 C 0 1 Y N N -25.226 -7.473 -26.233 -6.616 -0.027 -0.395 C23 A5B 5 A5B C27 C5 C 0 1 N N N -25.243 -8.541 -25.315 -7.980 -0.391 -0.808 C27 A5B 6 A5B O4 O2 O 0 1 N N N -24.737 -9.643 -25.615 -8.795 -0.738 0.024 O4 A5B 7 A5B O3 O3 O 0 1 N N N -25.640 -8.372 -24.142 -8.327 -0.339 -2.110 O3 A5B 8 A5B C22 C6 C 0 1 Y N N -24.222 -7.450 -27.188 -5.676 0.374 -1.351 C22 A5B 9 A5B C21 C7 C 0 1 Y N N -24.153 -6.408 -28.110 -4.411 0.711 -0.967 C21 A5B 10 A5B C20 C8 C 0 1 Y N N -25.039 -5.340 -28.087 -4.043 0.656 0.375 C20 A5B 11 A5B N4 N1 N 0 1 N N N -24.820 -4.402 -29.036 -2.750 1.003 0.756 N4 A5B 12 A5B C12 C9 C 0 1 Y N N -25.428 -3.213 -29.159 -1.684 0.732 -0.087 C12 A5B 13 A5B N3 N2 N 0 1 Y N N -26.557 -2.869 -28.516 -0.479 1.168 0.240 N3 A5B 14 A5B N2 N3 N 0 1 Y N N -24.865 -2.353 -30.041 -1.898 0.039 -1.196 N2 A5B 15 A5B C11 C10 C 0 1 Y N N -25.427 -1.091 -30.262 -0.904 -0.243 -2.022 C11 A5B 16 A5B C10 C11 C 0 1 Y N N -26.575 -0.749 -29.567 0.374 0.198 -1.715 C10 A5B 17 A5B C9 C12 C 0 1 N N N -27.033 0.528 -29.896 1.513 -0.135 -2.636 C9 A5B 18 A5B N1 N4 N 0 1 N N N -27.272 1.311 -28.667 2.470 -0.989 -1.940 N1 A5B 19 A5B C13 C13 C 0 1 Y N N -27.123 -1.666 -28.681 0.572 0.924 -0.552 C13 A5B 20 A5B C14 C14 C 0 1 Y N N -28.283 -1.457 -27.947 1.893 1.459 -0.158 C14 A5B 21 A5B C19 C15 C 0 1 Y N N -29.015 -2.621 -27.713 1.923 2.730 0.428 C19 A5B 22 A5B C18 C16 C 0 1 Y N N -30.223 -2.531 -27.024 3.117 3.295 0.816 C18 A5B 23 A5B C17 C17 C 0 1 Y N N -30.676 -1.294 -26.566 4.305 2.608 0.627 C17 A5B 24 A5B CL1 CL1 CL 0 0 N N N -32.190 -1.149 -25.698 5.809 3.325 1.115 CL1 A5B 25 A5B C16 C18 C 0 1 Y N N -29.925 -0.145 -26.789 4.295 1.355 0.053 C16 A5B 26 A5B C15 C19 C 0 1 Y N N -28.738 -0.223 -27.505 3.088 0.762 -0.344 C15 A5B 27 A5B C8 C20 C 0 1 N N N -28.066 0.999 -27.648 3.154 -0.582 -0.933 C8 A5B 28 A5B C7 C21 C 0 1 Y N N -28.043 1.898 -26.580 4.088 -1.546 -0.314 C7 A5B 29 A5B C6 C22 C 0 1 Y N N -27.465 1.537 -25.353 5.408 -1.635 -0.764 C6 A5B 30 A5B F1 F1 F 0 1 N N N -26.923 0.230 -25.136 5.836 -0.839 -1.768 F1 A5B 31 A5B C5 C23 C 0 1 Y N N -27.438 2.446 -24.296 6.275 -2.539 -0.181 C5 A5B 32 A5B C4 C24 C 0 1 Y N N -27.967 3.723 -24.471 5.840 -3.358 0.848 C4 A5B 33 A5B C3 C25 C 0 1 Y N N -28.524 4.094 -25.695 4.537 -3.279 1.301 C3 A5B 34 A5B C2 C26 C 0 1 Y N N -28.544 3.176 -26.736 3.656 -2.373 0.731 C2 A5B 35 A5B O1 O4 O 0 1 N N N -29.058 3.446 -27.955 2.378 -2.291 1.181 O1 A5B 36 A5B C1 C27 C 0 1 N N N -28.759 4.781 -28.329 2.009 -3.165 2.249 C1 A5B 37 A5B H1 H1 H 0 1 N N N -28.686 -5.478 -24.324 -7.531 -0.827 3.894 H1 A5B 38 A5B H2 H2 H 0 1 N N N -27.329 -4.434 -24.866 -5.880 -1.199 3.344 H2 A5B 39 A5B H3 H3 H 0 1 N N N -28.467 -5.125 -26.072 -6.387 0.494 3.554 H3 A5B 40 A5B H4 H4 H 0 1 N N N -26.764 -4.541 -27.086 -4.677 0.218 2.377 H4 A5B 41 A5B H5 H5 H 0 1 N N N -25.482 -9.161 -23.637 -9.234 -0.587 -2.333 H5 A5B 42 A5B H6 H6 H 0 1 N N N -23.490 -8.243 -27.218 -5.953 0.416 -2.395 H6 A5B 43 A5B H7 H7 H 0 1 N N N -23.384 -6.432 -28.868 -3.689 1.020 -1.709 H7 A5B 44 A5B H8 H8 H 0 1 N N N -24.127 -4.619 -29.723 -2.595 1.434 1.611 H8 A5B 45 A5B H9 H9 H 0 1 N N N -24.976 -0.400 -30.958 -1.085 -0.809 -2.924 H9 A5B 46 A5B H10 H10 H 0 1 N N N -26.278 1.038 -30.512 1.130 -0.658 -3.513 H10 A5B 47 A5B H11 H11 H 0 1 N N N -27.972 0.443 -30.462 2.007 0.784 -2.950 H11 A5B 48 A5B H12 H12 H 0 1 N N N -28.651 -3.577 -28.060 1.000 3.271 0.578 H12 A5B 49 A5B H13 H13 H 0 1 N N N -30.809 -3.420 -26.844 3.128 4.276 1.268 H13 A5B 50 A5B H14 H14 H 0 1 N N N -30.264 0.806 -26.406 5.225 0.824 -0.092 H14 A5B 51 A5B H15 H15 H 0 1 N N N -27.009 2.162 -23.346 7.295 -2.608 -0.528 H15 A5B 52 A5B H16 H16 H 0 1 N N N -27.946 4.430 -23.654 6.523 -4.062 1.299 H16 A5B 53 A5B H17 H17 H 0 1 N N N -28.935 5.084 -25.831 4.206 -3.921 2.103 H17 A5B 54 A5B H18 H18 H 0 1 N N N -29.183 4.988 -29.323 0.964 -2.998 2.511 H18 A5B 55 A5B H19 H19 H 0 1 N N N -29.194 5.474 -27.594 2.144 -4.200 1.935 H19 A5B 56 A5B H20 H20 H 0 1 N N N -27.668 4.917 -28.360 2.638 -2.964 3.117 H20 A5B 57 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A5B C11 N2 DOUB Y N 1 A5B C11 C10 SING Y N 2 A5B N2 C12 SING Y N 3 A5B C9 C10 SING N N 4 A5B C9 N1 SING N N 5 A5B C10 C13 DOUB Y N 6 A5B C12 N4 SING N N 7 A5B C12 N3 DOUB Y N 8 A5B N4 C20 SING N N 9 A5B C13 N3 SING Y N 10 A5B C13 C14 SING N N 11 A5B N1 C8 DOUB N N 12 A5B C1 O1 SING N N 13 A5B C21 C20 DOUB Y N 14 A5B C21 C22 SING Y N 15 A5B C20 C25 SING Y N 16 A5B O1 C2 SING N N 17 A5B C14 C19 DOUB Y N 18 A5B C14 C15 SING Y N 19 A5B C19 C18 SING Y N 20 A5B C8 C15 SING N N 21 A5B C8 C7 SING N N 22 A5B C15 C16 DOUB Y N 23 A5B C22 C23 DOUB Y N 24 A5B C25 C24 DOUB Y N 25 A5B C18 C17 DOUB Y N 26 A5B C16 C17 SING Y N 27 A5B C2 C7 DOUB Y N 28 A5B C2 C3 SING Y N 29 A5B C7 C6 SING Y N 30 A5B C17 CL1 SING N N 31 A5B C23 C24 SING Y N 32 A5B C23 C27 SING N N 33 A5B C24 O2 SING N N 34 A5B C3 C4 DOUB Y N 35 A5B O4 C27 DOUB N N 36 A5B C6 F1 SING N N 37 A5B C6 C5 DOUB Y N 38 A5B C27 O3 SING N N 39 A5B O2 C26 SING N N 40 A5B C4 C5 SING Y N 41 A5B C26 H1 SING N N 42 A5B C26 H2 SING N N 43 A5B C26 H3 SING N N 44 A5B C25 H4 SING N N 45 A5B O3 H5 SING N N 46 A5B C22 H6 SING N N 47 A5B C21 H7 SING N N 48 A5B N4 H8 SING N N 49 A5B C11 H9 SING N N 50 A5B C9 H10 SING N N 51 A5B C9 H11 SING N N 52 A5B C19 H12 SING N N 53 A5B C18 H13 SING N N 54 A5B C16 H14 SING N N 55 A5B C5 H15 SING N N 56 A5B C4 H16 SING N N 57 A5B C3 H17 SING N N 58 A5B C1 H18 SING N N 59 A5B C1 H19 SING N N 60 A5B C1 H20 SING N N 61 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A5B SMILES ACDLabs 12.01 "COc1cc(ccc1C(O)=O)Nc2nc3c(cn2)CN=C(c4c3ccc(Cl)c4)c5c(F)cccc5OC" A5B InChI InChI 1.03 "InChI=1S/C27H20ClFN4O4/c1-36-21-5-3-4-20(29)23(21)25-19-10-15(28)6-8-17(19)24-14(12-30-25)13-31-27(33-24)32-16-7-9-18(26(34)35)22(11-16)37-2/h3-11,13H,12H2,1-2H3,(H,34,35)(H,31,32,33)" A5B InChIKey InChI 1.03 ZLHFILGSQDJULK-UHFFFAOYSA-N A5B SMILES_CANONICAL CACTVS 3.385 "COc1cccc(F)c1C2=NCc3cnc(Nc4ccc(C(O)=O)c(OC)c4)nc3c5ccc(Cl)cc25" A5B SMILES CACTVS 3.385 "COc1cccc(F)c1C2=NCc3cnc(Nc4ccc(C(O)=O)c(OC)c4)nc3c5ccc(Cl)cc25" A5B SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "COc1cccc(c1C2=NCc3cnc(nc3-c4c2cc(cc4)Cl)Nc5ccc(c(c5)OC)C(=O)O)F" A5B SMILES "OpenEye OEToolkits" 2.0.4 "COc1cccc(c1C2=NCc3cnc(nc3-c4c2cc(cc4)Cl)Nc5ccc(c(c5)OC)C(=O)O)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A5B "SYSTEMATIC NAME" ACDLabs 12.01 "4-{[9-chloro-7-(2-fluoro-6-methoxyphenyl)-5H-pyrimido[5,4-d][2]benzazepin-2-yl]amino}-2-methoxybenzoic acid" A5B "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "4-[[9-chloranyl-7-(2-fluoranyl-6-methoxy-phenyl)-5~{H}-pyrimido[5,4-d][2]benzazepin-2-yl]amino]-2-methoxy-benzoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A5B "Create component" 2016-02-21 EBI A5B "Initial release" 2016-11-09 RCSB #