data_A6P # _chem_comp.id A6P _chem_comp.name 6-O-phosphono-alpha-D-allopyranose _chem_comp.type "D-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H13 O9 P" _chem_comp.mon_nstd_parent_comp_id AFD _chem_comp.pdbx_synonyms "6-O-phosphono-alpha-D-allose; 6-O-phosphono-D-allose; 6-O-phosphono-allose" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2008-06-10 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 260.136 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A6P _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2VVO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 A6P 6-O-phosphono-alpha-D-allose PDB ? 2 A6P 6-O-phosphono-D-allose PDB ? 3 A6P 6-O-phosphono-allose PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A6P C1 C1 C 0 1 N N S 34.306 8.846 -11.508 -2.188 1.467 -0.252 C1 A6P 1 A6P C2 C2 C 0 1 N N R 34.598 7.767 -10.435 -3.229 0.477 -0.780 C2 A6P 2 A6P C3 C3 C 0 1 N N R 34.245 8.237 -9.025 -2.961 -0.905 -0.176 C3 A6P 3 A6P C4 C4 C 0 1 N N S 34.687 9.676 -8.730 -1.529 -1.329 -0.516 C4 A6P 4 A6P C5 C5 C 0 1 N N R 34.304 10.631 -9.857 -0.554 -0.269 0.002 C5 A6P 5 A6P C6 C6 C 0 1 N N N 34.887 12.020 -9.623 0.875 -0.656 -0.386 C6 A6P 6 A6P O1 O1 O 0 1 N Y N 32.915 8.963 -11.779 -2.317 1.583 1.166 O1 A6P 7 A6P O2 O2 O 0 1 N N N 33.902 6.522 -10.671 -4.537 0.915 -0.409 O2 A6P 8 A6P O3 O3 O 0 1 N N N 32.820 8.064 -8.771 -3.117 -0.844 1.243 O3 A6P 9 A6P O4 O4 O 0 1 N N N 34.063 10.120 -7.523 -1.243 -2.585 0.104 O4 A6P 10 A6P O5 O5 O 0 1 N N N 34.798 10.133 -11.104 -0.878 0.997 -0.575 O5 A6P 11 A6P O6 O6 O 0 1 N N N 34.489 12.874 -10.709 1.794 0.271 0.196 O6 A6P 12 A6P P P P 0 1 N N N 34.806 14.464 -10.706 3.388 0.167 -0.005 P A6P 13 A6P O1P O1P O 0 1 N N N 34.144 15.003 -9.456 3.930 -1.183 0.686 O1P A6P 14 A6P O2P O2P O 0 1 N N N 36.276 14.559 -10.647 3.703 0.143 -1.451 O2P A6P 15 A6P O3P O3P O 0 1 N N N 34.194 15.010 -11.974 4.099 1.441 0.678 O3P A6P 16 A6P H1 H1 H 0 1 N N N 34.826 8.517 -12.420 -2.349 2.443 -0.712 H1 A6P 17 A6P H2 H2 H 0 1 N N N 35.681 7.595 -10.516 -3.158 0.419 -1.867 H2 A6P 18 A6P HO1 HA H 0 1 N Y N 32.434 8.989 -10.960 -1.688 2.195 1.570 HO1 A6P 19 A6P H3 H3 H 0 1 N N N 34.815 7.600 -8.333 -3.664 -1.627 -0.591 H3 A6P 20 A6P HO2 HB H 0 1 N Y N 33.749 6.416 -11.603 -4.773 1.787 -0.754 HO2 A6P 21 A6P H4 H4 H 0 1 N N N 35.783 9.678 -8.633 -1.424 -1.424 -1.597 H4 A6P 22 A6P HO3 HC H 0 1 N Y N 32.667 8.026 -7.834 -4.000 -0.574 1.531 HO3 A6P 23 A6P H5 H5 H 0 1 N N N 33.206 10.701 -9.880 -0.630 -0.204 1.088 H5 A6P 24 A6P HO4 HD H 0 1 N Y N 34.720 10.218 -6.844 -1.827 -3.303 -0.175 HO4 A6P 25 A6P H61 H6C1 H 0 1 N N N 34.510 12.426 -8.673 1.091 -1.660 -0.021 H61 A6P 26 A6P H62 H6C2 H 0 1 N N N 35.984 11.963 -9.574 0.975 -0.634 -1.471 H62 A6P 27 A6P H1P H1P H 0 1 N N N 34.797 15.116 -8.775 3.758 -1.235 1.636 H1P A6P 28 A6P H3P H3P H 0 1 N N N 33.259 15.125 -11.851 5.062 1.445 0.595 H3P A6P 29 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A6P C1 C2 SING N N 1 A6P C1 O1 SING N N 2 A6P C1 O5 SING N N 3 A6P C2 C3 SING N N 4 A6P C2 O2 SING N N 5 A6P C3 C4 SING N N 6 A6P C3 O3 SING N N 7 A6P C4 C5 SING N N 8 A6P C4 O4 SING N N 9 A6P C5 C6 SING N N 10 A6P C5 O5 SING N N 11 A6P C6 O6 SING N N 12 A6P O6 P SING N N 13 A6P P O1P SING N N 14 A6P P O2P DOUB N N 15 A6P P O3P SING N N 16 A6P C1 H1 SING N N 17 A6P C2 H2 SING N N 18 A6P O1 HO1 SING N N 19 A6P C3 H3 SING N N 20 A6P O2 HO2 SING N N 21 A6P C4 H4 SING N N 22 A6P O3 HO3 SING N N 23 A6P C5 H5 SING N N 24 A6P O4 HO4 SING N N 25 A6P C6 H61 SING N N 26 A6P C6 H62 SING N N 27 A6P O1P H1P SING N N 28 A6P O3P H3P SING N N 29 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A6P SMILES ACDLabs 10.04 "O=P(O)(O)OCC1OC(O)C(O)C(O)C1O" A6P SMILES_CANONICAL CACTVS 3.341 "O[C@H]1O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@@H](O)[C@H]1O" A6P SMILES CACTVS 3.341 "O[CH]1O[CH](CO[P](O)(O)=O)[CH](O)[CH](O)[CH]1O" A6P SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@@H]1[C@H]([C@H]([C@H]([C@H](O1)O)O)O)O)OP(=O)(O)O" A6P SMILES "OpenEye OEToolkits" 1.5.0 "C(C1C(C(C(C(O1)O)O)O)O)OP(=O)(O)O" A6P InChI InChI 1.03 "InChI=1S/C6H13O9P/c7-3-2(1-14-16(11,12)13)15-6(10)5(9)4(3)8/h2-10H,1H2,(H2,11,12,13)/t2-,3-,4-,5-,6+/m1/s1" A6P InChIKey InChI 1.03 NBSCHQHZLSJFNQ-UKFBFLRUSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A6P "SYSTEMATIC NAME" ACDLabs 10.04 6-O-phosphono-alpha-D-allopyranose A6P "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4R,5R,6S)-3,4,5,6-tetrahydroxyoxan-2-yl]methyl dihydrogen phosphate" A6P "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 a-D-Allp6PO3 # _pdbx_chem_comp_related.comp_id A6P _pdbx_chem_comp_related.related_comp_id AFD _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 A6P C1 AFD C1 "Carbohydrate core" 2 A6P C2 AFD C2 "Carbohydrate core" 3 A6P C3 AFD C3 "Carbohydrate core" 4 A6P C4 AFD C4 "Carbohydrate core" 5 A6P C5 AFD C5 "Carbohydrate core" 6 A6P C6 AFD C6 "Carbohydrate core" 7 A6P O1 AFD O1 "Carbohydrate core" 8 A6P O2 AFD O2 "Carbohydrate core" 9 A6P O3 AFD O3 "Carbohydrate core" 10 A6P O4 AFD O4 "Carbohydrate core" 11 A6P O5 AFD O5 "Carbohydrate core" 12 A6P O6 AFD O6 "Carbohydrate core" 13 A6P H1 AFD H1 "Carbohydrate core" 14 A6P H2 AFD H2 "Carbohydrate core" 15 A6P H3 AFD H3 "Carbohydrate core" 16 A6P H4 AFD H4 "Carbohydrate core" 17 A6P H5 AFD H5 "Carbohydrate core" 18 A6P H61 AFD H61 "Carbohydrate core" 19 A6P H62 AFD H62 "Carbohydrate core" 20 A6P HO1 AFD HO1 "Carbohydrate core" 21 A6P HO2 AFD HO2 "Carbohydrate core" 22 A6P HO3 AFD HO3 "Carbohydrate core" 23 A6P HO4 AFD HO4 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support A6P "CARBOHYDRATE ISOMER" D PDB ? A6P "CARBOHYDRATE RING" pyranose PDB ? A6P "CARBOHYDRATE ANOMER" alpha PDB ? A6P "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A6P "Create component" 2008-06-10 EBI A6P "Modify descriptor" 2011-06-04 RCSB A6P "Other modification" 2020-07-03 RCSB A6P "Modify parent residue" 2020-07-17 RCSB A6P "Modify synonyms" 2020-07-17 RCSB A6P "Modify internal type" 2020-07-17 RCSB A6P "Modify linking type" 2020-07-17 RCSB A6P "Modify atom id" 2020-07-17 RCSB A6P "Modify component atom id" 2020-07-17 RCSB A6P "Modify leaving atom flag" 2020-07-17 RCSB ##