data_AA9
#
_chem_comp.id AA9
_chem_comp.name "N-((1S,2R)-3-(((1S)-2-(CYCLOHEXYLAMINO)-1--METHYL-2-OXOETHYL)AMINO)-2-HYDROXY-1-(PHENYLMETHYL)PROPYL)-3-(ETHYLAMINO)-5-((METHYLSULFONYL)(PHENYL)AMINO)BENZAMIDE"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C35 H47 N5 O5 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2010-05-24
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 649.843
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code AA9
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2XFK
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
AA9 C1 C1 C 0 1 N N N 27.563 -3.565 34.179 -2.339 5.293 -3.107 C1 AA9 1
AA9 C2 C2 C 0 1 N N N 29.061 -3.792 34.099 -2.113 3.973 -2.368 C2 AA9 2
AA9 N3 N3 N 0 1 N N N 29.614 -3.575 35.428 -3.354 3.567 -1.703 N3 AA9 3
AA9 C4 C4 C 0 1 Y N N 30.022 -2.252 35.733 -3.394 2.385 -0.960 C4 AA9 4
AA9 C5 C5 C 0 1 Y N N 30.632 -2.056 36.964 -4.571 2.001 -0.330 C5 AA9 5
AA9 C6 C6 C 0 1 Y N N 31.085 -0.814 37.349 -4.615 0.827 0.410 C6 AA9 6
AA9 C7 C7 C 0 1 Y N N 30.937 0.276 36.518 -3.483 0.033 0.522 C7 AA9 7
AA9 C8 C8 C 0 1 Y N N 30.332 0.087 35.290 -2.299 0.415 -0.110 C8 AA9 8
AA9 C9 C9 C 0 1 Y N N 29.886 -1.161 34.885 -2.260 1.593 -0.857 C9 AA9 9
AA9 C10 C10 C 0 1 N N N 30.190 1.250 34.400 -1.091 -0.428 0.008 C10 AA9 10
AA9 O11 O11 O 0 1 N N N 31.123 2.030 34.256 -1.128 -1.457 0.656 O11 AA9 11
AA9 N12 N12 N 0 1 N N N 28.987 1.364 33.758 0.052 -0.058 -0.603 N12 AA9 12
AA9 C13 C13 C 0 1 N N S 28.806 2.314 32.678 1.250 -0.894 -0.487 C13 AA9 13
AA9 C14 C14 C 0 1 N N N 28.168 1.597 31.496 1.210 -1.993 -1.550 C14 AA9 14
AA9 C15 C15 C 0 1 Y N N 28.837 0.289 31.176 0.051 -2.916 -1.276 C15 AA9 15
AA9 C16 C16 C 0 1 Y N N 30.207 0.235 30.983 -1.188 -2.655 -1.831 C16 AA9 16
AA9 C17 C17 C 0 1 Y N N 30.795 -0.986 30.699 -2.251 -3.501 -1.579 C17 AA9 17
AA9 C18 C18 C 0 1 Y N N 30.039 -2.137 30.604 -2.075 -4.610 -0.772 C18 AA9 18
AA9 C19 C19 C 0 1 Y N N 28.678 -2.086 30.799 -0.836 -4.872 -0.217 C19 AA9 19
AA9 C20 C20 C 0 1 Y N N 28.080 -0.870 31.083 0.228 -4.027 -0.473 C20 AA9 20
AA9 C21 C21 C 0 1 N N R 28.003 3.513 33.188 2.496 -0.030 -0.692 C21 AA9 21
AA9 O22 O22 O 0 1 N N N 27.666 4.414 32.131 2.513 0.471 -2.030 O22 AA9 22
AA9 C23 C23 C 0 1 N N N 28.776 4.369 34.186 3.748 -0.876 -0.447 C23 AA9 23
AA9 N24 N24 N 0 1 N N N 27.932 5.506 34.571 4.939 -0.020 -0.526 N24 AA9 24
AA9 C25 C25 C 0 1 N N S 28.677 6.680 35.068 6.163 -0.800 -0.296 C25 AA9 25
AA9 C26 C26 C 0 1 N N N 29.305 6.393 36.416 6.615 -1.439 -1.611 C26 AA9 26
AA9 C27 C27 C 0 1 N N N 29.710 7.132 34.059 7.248 0.110 0.220 C27 AA9 27
AA9 O28 O28 O 0 1 N N N 30.901 6.836 34.130 7.024 1.291 0.380 O28 AA9 28
AA9 N29 N29 N 0 1 N N N 29.184 7.915 33.065 8.468 -0.389 0.503 N29 AA9 29
AA9 C30 C30 C 0 1 N N N 30.062 8.343 31.963 9.523 0.495 1.004 C30 AA9 30
AA9 C31 C31 C 0 1 N N N 29.311 8.187 30.664 10.534 -0.324 1.810 C31 AA9 31
AA9 C32 C32 C 0 1 N N N 30.114 8.668 29.470 11.635 0.600 2.334 C32 AA9 32
AA9 C33 C33 C 0 1 N N N 30.366 10.148 29.663 12.345 1.268 1.154 C33 AA9 33
AA9 C34 C34 C 0 1 N N N 31.178 10.372 30.927 11.334 2.086 0.348 C34 AA9 34
AA9 C35 C35 C 0 1 N N N 30.475 9.793 32.157 10.232 1.163 -0.175 C35 AA9 35
AA9 N36 N36 N 0 1 N N N 31.732 -0.613 38.607 -5.801 0.445 1.042 N36 AA9 36
AA9 C37 C37 C 0 1 Y N N 33.059 -0.068 38.571 -6.938 0.162 0.282 C37 AA9 37
AA9 C38 C38 C 0 1 Y N N 33.270 1.207 39.043 -8.114 0.870 0.498 C38 AA9 38
AA9 C39 C39 C 0 1 Y N N 34.543 1.738 39.015 -9.236 0.589 -0.256 C39 AA9 39
AA9 C40 C40 C 0 1 Y N N 35.579 0.990 38.504 -9.191 -0.397 -1.225 C40 AA9 40
AA9 C41 C41 C 0 1 Y N N 35.357 -0.284 38.021 -8.023 -1.104 -1.442 C41 AA9 41
AA9 C42 C42 C 0 1 Y N N 34.082 -0.829 38.055 -6.895 -0.824 -0.696 C42 AA9 42
AA9 S43 S43 S 0 1 N N N 31.237 -1.321 40.056 -5.858 0.327 2.693 S43 AA9 43
AA9 C44 C44 C 0 1 N N N 32.189 -2.812 40.157 -6.193 2.018 3.256 C44 AA9 44
AA9 O45 O45 O 0 1 N N N 29.838 -1.656 39.898 -6.976 -0.514 2.946 O45 AA9 45
AA9 O46 O46 O 0 1 N N N 31.658 -0.450 41.141 -4.544 -0.070 3.062 O46 AA9 46
AA9 H11C H11C H 0 0 N N N 27.256 -3.510 35.234 -1.415 5.595 -3.602 H11C AA9 47
AA9 H12C H12C H 0 0 N N N 27.308 -2.622 33.673 -3.124 5.163 -3.852 H12C AA9 48
AA9 H13C H13C H 0 0 N N N 27.039 -4.398 33.688 -2.637 6.062 -2.395 H13C AA9 49
AA9 H21C H21C H 0 0 N N N 29.270 -4.820 33.767 -1.814 3.204 -3.080 H21C AA9 50
AA9 H22C H22C H 0 0 N N N 29.516 -3.099 33.376 -1.328 4.103 -1.623 H22C AA9 51
AA9 H3 H3 H 0 1 N N N 28.906 -3.826 36.088 -4.148 4.120 -1.779 H3 AA9 52
AA9 H5 H5 H 0 1 N N N 30.754 -2.895 37.634 -5.453 2.618 -0.416 H5 AA9 53
AA9 H9 H9 H 0 1 N N N 29.434 -1.285 33.912 -1.347 1.890 -1.350 H9 AA9 54
AA9 H7 H7 H 0 1 N N N 31.285 1.253 36.819 -3.517 -0.880 1.098 H7 AA9 55
AA9 H12 H12 H 0 1 N N N 28.222 0.784 34.038 0.082 0.763 -1.120 H12 AA9 56
AA9 H13 H13 H 0 1 N N N 29.767 2.716 32.324 1.281 -1.347 0.504 H13 AA9 57
AA9 H141 H141 H 0 0 N N N 27.114 1.397 31.740 1.089 -1.541 -2.535 H141 AA9 58
AA9 H142 H142 H 0 0 N N N 28.273 2.248 30.616 2.140 -2.559 -1.522 H142 AA9 59
AA9 H21 H21 H 0 1 N N N 27.117 3.058 33.654 2.479 0.805 0.009 H21 AA9 60
AA9 H16 H16 H 0 1 N N N 30.807 1.130 31.053 -1.325 -1.788 -2.461 H16 AA9 61
AA9 H20 H20 H 0 1 N N N 27.012 -0.823 31.234 1.197 -4.234 -0.043 H20 AA9 62
AA9 H17 H17 H 0 1 N N N 31.863 -1.039 30.549 -3.219 -3.297 -2.012 H17 AA9 63
AA9 H18 H18 H 0 1 N N N 30.516 -3.079 30.376 -2.906 -5.271 -0.574 H18 AA9 64
AA9 H19 H19 H 0 1 N N N 28.083 -2.985 30.731 -0.699 -5.738 0.413 H19 AA9 65
AA9 H22 H22 H 0 1 N N N 27.591 5.295 32.477 2.529 -0.218 -2.708 H22 AA9 66
AA9 H231 H231 H 0 0 N N N 29.026 3.772 35.075 3.692 -1.330 0.542 H231 AA9 67
AA9 H232 H232 H 0 0 N N N 29.710 4.729 33.731 3.811 -1.658 -1.204 H232 AA9 68
AA9 H24 H24 H 0 1 N N N 27.415 5.791 33.764 4.979 0.463 -1.411 H24 AA9 69
AA9 H25 H25 H 0 1 N N N 27.963 7.506 35.205 5.964 -1.580 0.438 H25 AA9 70
AA9 H261 H261 H 0 0 N N N 30.397 6.323 36.305 6.814 -0.658 -2.345 H261 AA9 71
AA9 H262 H262 H 0 0 N N N 29.059 7.205 37.115 7.523 -2.017 -1.440 H262 AA9 72
AA9 H263 H263 H 0 0 N N N 28.915 5.442 36.807 5.830 -2.097 -1.984 H263 AA9 73
AA9 H29 H29 H 0 1 N N N 28.223 8.190 33.088 8.647 -1.334 0.375 H29 AA9 74
AA9 H30 H30 H 0 1 N N N 30.971 7.724 31.947 9.082 1.260 1.644 H30 AA9 75
AA9 H311 H311 H 0 0 N N N 29.078 7.121 30.521 10.028 -0.800 2.651 H311 AA9 76
AA9 H312 H312 H 0 0 N N N 28.400 8.800 30.726 10.974 -1.089 1.171 H312 AA9 77
AA9 H351 H351 H 0 0 N N N 29.572 10.389 32.355 10.672 0.398 -0.815 H351 AA9 78
AA9 H352 H352 H 0 0 N N N 31.184 9.831 32.998 9.512 1.746 -0.749 H352 AA9 79
AA9 H321 H321 H 0 0 N N N 31.069 8.125 29.411 11.195 1.365 2.973 H321 AA9 80
AA9 H322 H322 H 0 0 N N N 29.565 8.487 28.534 12.356 0.017 2.908 H322 AA9 81
AA9 H331 H331 H 0 0 N N N 30.922 10.539 28.798 13.130 1.926 1.527 H331 AA9 82
AA9 H332 H332 H 0 0 N N N 29.403 10.672 29.753 12.785 0.503 0.514 H332 AA9 83
AA9 H341 H341 H 0 0 N N N 32.155 9.879 30.813 10.893 2.851 0.988 H341 AA9 84
AA9 H342 H342 H 0 0 N N N 31.296 11.456 31.074 11.839 2.562 -0.492 H342 AA9 85
AA9 H38 H38 H 0 1 N N N 32.446 1.787 39.432 -8.150 1.640 1.255 H38 AA9 86
AA9 H42 H42 H 0 1 N N N 33.897 -1.827 37.685 -5.982 -1.373 -0.869 H42 AA9 87
AA9 H39 H39 H 0 1 N N N 34.725 2.734 39.391 -10.151 1.139 -0.088 H39 AA9 88
AA9 H40 H40 H 0 1 N N N 36.576 1.404 38.481 -10.071 -0.615 -1.812 H40 AA9 89
AA9 H41 H41 H 0 1 N N N 36.178 -0.857 37.616 -7.991 -1.873 -2.200 H41 AA9 90
AA9 H441 H441 H 0 0 N N N 32.386 -3.191 39.143 -7.204 2.305 2.965 H441 AA9 91
AA9 H442 H442 H 0 0 N N N 33.143 -2.604 40.663 -6.101 2.065 4.341 H442 AA9 92
AA9 H443 H443 H 0 0 N N N 31.628 -3.567 40.728 -5.477 2.701 2.801 H443 AA9 93
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
AA9 C1 C2 SING N N 1
AA9 C2 N3 SING N N 2
AA9 N3 C4 SING N N 3
AA9 C4 C5 SING Y N 4
AA9 C4 C9 DOUB Y N 5
AA9 C5 C6 DOUB Y N 6
AA9 C6 C7 SING Y N 7
AA9 C6 N36 SING N N 8
AA9 C7 C8 DOUB Y N 9
AA9 C8 C9 SING Y N 10
AA9 C8 C10 SING N N 11
AA9 C10 O11 DOUB N N 12
AA9 C10 N12 SING N N 13
AA9 N12 C13 SING N N 14
AA9 C13 C14 SING N N 15
AA9 C13 C21 SING N N 16
AA9 C14 C15 SING N N 17
AA9 C15 C16 SING Y N 18
AA9 C15 C20 DOUB Y N 19
AA9 C16 C17 DOUB Y N 20
AA9 C17 C18 SING Y N 21
AA9 C18 C19 DOUB Y N 22
AA9 C19 C20 SING Y N 23
AA9 C21 O22 SING N N 24
AA9 C21 C23 SING N N 25
AA9 C23 N24 SING N N 26
AA9 N24 C25 SING N N 27
AA9 C25 C26 SING N N 28
AA9 C25 C27 SING N N 29
AA9 C27 O28 DOUB N N 30
AA9 C27 N29 SING N N 31
AA9 N29 C30 SING N N 32
AA9 C30 C31 SING N N 33
AA9 C30 C35 SING N N 34
AA9 C31 C32 SING N N 35
AA9 C32 C33 SING N N 36
AA9 C33 C34 SING N N 37
AA9 C34 C35 SING N N 38
AA9 N36 C37 SING N N 39
AA9 N36 S43 SING N N 40
AA9 C37 C38 SING Y N 41
AA9 C37 C42 DOUB Y N 42
AA9 C38 C39 DOUB Y N 43
AA9 C39 C40 SING Y N 44
AA9 C40 C41 DOUB Y N 45
AA9 C41 C42 SING Y N 46
AA9 S43 C44 SING N N 47
AA9 S43 O45 DOUB N N 48
AA9 S43 O46 DOUB N N 49
AA9 C1 H11C SING N N 50
AA9 C1 H12C SING N N 51
AA9 C1 H13C SING N N 52
AA9 C2 H21C SING N N 53
AA9 C2 H22C SING N N 54
AA9 N3 H3 SING N N 55
AA9 C5 H5 SING N N 56
AA9 C9 H9 SING N N 57
AA9 C7 H7 SING N N 58
AA9 N12 H12 SING N N 59
AA9 C13 H13 SING N N 60
AA9 C14 H141 SING N N 61
AA9 C14 H142 SING N N 62
AA9 C21 H21 SING N N 63
AA9 C16 H16 SING N N 64
AA9 C20 H20 SING N N 65
AA9 C17 H17 SING N N 66
AA9 C18 H18 SING N N 67
AA9 C19 H19 SING N N 68
AA9 O22 H22 SING N N 69
AA9 C23 H231 SING N N 70
AA9 C23 H232 SING N N 71
AA9 N24 H24 SING N N 72
AA9 C25 H25 SING N N 73
AA9 C26 H261 SING N N 74
AA9 C26 H262 SING N N 75
AA9 C26 H263 SING N N 76
AA9 N29 H29 SING N N 77
AA9 C30 H30 SING N N 78
AA9 C31 H311 SING N N 79
AA9 C31 H312 SING N N 80
AA9 C35 H351 SING N N 81
AA9 C35 H352 SING N N 82
AA9 C32 H321 SING N N 83
AA9 C32 H322 SING N N 84
AA9 C33 H331 SING N N 85
AA9 C33 H332 SING N N 86
AA9 C34 H341 SING N N 87
AA9 C34 H342 SING N N 88
AA9 C38 H38 SING N N 89
AA9 C42 H42 SING N N 90
AA9 C39 H39 SING N N 91
AA9 C40 H40 SING N N 92
AA9 C41 H41 SING N N 93
AA9 C44 H441 SING N N 94
AA9 C44 H442 SING N N 95
AA9 C44 H443 SING N N 96
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
AA9 SMILES ACDLabs 10.04 "O=C(NC1CCCCC1)C(NCC(O)C(NC(=O)c3cc(NCC)cc(N(c2ccccc2)S(=O)(=O)C)c3)Cc4ccccc4)C"
AA9 SMILES_CANONICAL CACTVS 3.352 "CCNc1cc(cc(c1)C(=O)N[C@@H](Cc2ccccc2)[C@H](O)CN[C@@H](C)C(=O)NC3CCCCC3)N(c4ccccc4)[S](C)(=O)=O"
AA9 SMILES CACTVS 3.352 "CCNc1cc(cc(c1)C(=O)N[CH](Cc2ccccc2)[CH](O)CN[CH](C)C(=O)NC3CCCCC3)N(c4ccccc4)[S](C)(=O)=O"
AA9 SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "CCNc1cc(cc(c1)N(c2ccccc2)S(=O)(=O)C)C(=O)N[C@@H](Cc3ccccc3)[C@@H](CN[C@@H](C)C(=O)NC4CCCCC4)O"
AA9 SMILES "OpenEye OEToolkits" 1.6.1 "CCNc1cc(cc(c1)N(c2ccccc2)S(=O)(=O)C)C(=O)NC(Cc3ccccc3)C(CNC(C)C(=O)NC4CCCCC4)O"
AA9 InChI InChI 1.03
;InChI=1S/C35H47N5O5S/c1-4-36-29-21-27(22-31(23-29)40(46(3,44)45)30-18-12-7-13-19-30)35(43)39-32(20-26-14-8-5-9-15-26)33(41)24-37-25(2)34(42)38-28-16-10-6-11-17-28/h5,7-9,12-15,18-19,21-23,25,28,32-33,36-37,41H,4,6,10-11,16-17,20,24H2,1-3H3,(H,38,42)(H,39,43)/t25-,32-,33+/m0/s1
;
AA9 InChIKey InChI 1.03 SMMANAWVXZZNER-DZMJNENTSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
AA9 "SYSTEMATIC NAME" ACDLabs 10.04 "N-[(1S,2R)-1-benzyl-3-{[(1S)-2-(cyclohexylamino)-1-methyl-2-oxoethyl]amino}-2-hydroxypropyl]-3-(ethylamino)-5-[(methylsulfonyl)(phenyl)amino]benzamide"
AA9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "N-[(2S,3R)-4-[[(2S)-1-(cyclohexylamino)-1-oxo-propan-2-yl]amino]-3-hydroxy-1-phenyl-butan-2-yl]-3-ethylamino-5-(methylsulfonyl-phenyl-amino)benzamide"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
AA9 "Create component" 2010-05-24 EBI
AA9 "Modify aromatic_flag" 2011-06-04 RCSB
AA9 "Modify descriptor" 2011-06-04 RCSB
#