data_AAR
#
_chem_comp.id AAR
_chem_comp.name ARGININEAMIDE
_chem_comp.type "L-PEPTIDE LINKING"
_chem_comp.pdbx_type ATOMP
_chem_comp.formula "C6 H16 N5 O"
_chem_comp.mon_nstd_parent_comp_id ARG
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 1
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 174.224
_chem_comp.one_letter_code R
_chem_comp.three_letter_code AAR
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1ZTO
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
_chem_comp.pdbx_pcm N
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
AAR N N N 0 1 N N N N N N 9.933 18.644 -2.763 2.354 1.781 -0.290 N AAR 1
AAR CA CA C 0 1 N N S N N N 9.817 19.139 -4.170 2.295 0.475 0.379 CA AAR 2
AAR CB CB C 0 1 N N N N N N 9.715 17.938 -5.123 1.058 -0.288 -0.100 CB AAR 3
AAR CG CG C 0 1 N N N N N N 10.540 18.213 -6.386 -0.204 0.454 0.347 CG AAR 4
AAR CD CD C 0 1 N N N N N N 9.610 18.315 -7.598 -1.440 -0.309 -0.132 CD AAR 5
AAR NE NE N 0 1 N N N N N N 8.828 19.584 -7.520 -2.648 0.402 0.295 NE AAR 6
AAR CZ CZ C 0 1 N N N N N N 9.245 20.651 -8.142 -3.882 -0.096 -0.021 CZ AAR 7
AAR NH1 NH1 N 0 1 N N N N N N 9.011 20.795 -9.416 -3.986 -1.227 -0.718 NH1 AAR 8
AAR NH2 NH2 N 1 1 N N N N N N 9.893 21.572 -7.486 -4.981 0.549 0.368 NH2 AAR 9
AAR C C C 0 1 N N N N N N 8.572 20.034 -4.295 3.533 -0.317 0.047 C AAR 10
AAR O O O 0 1 N N N N N N 7.653 19.737 -5.035 4.195 -0.027 -0.927 O AAR 11
AAR NT NT N 0 1 N N N N N N 8.505 21.133 -3.595 3.905 -1.346 0.833 NT AAR 12
AAR H 1HN H 0 1 N N N N N N 9.241 18.057 -2.399 2.408 1.597 -1.281 H AAR 13
AAR H2 2HN H 0 1 N Y N N N N 10.707 17.990 -2.645 1.466 2.232 -0.127 H2 AAR 14
AAR HA HA H 0 1 N N N N N N 10.696 19.718 -4.416 2.236 0.622 1.458 HA AAR 15
AAR HB2 1HB H 0 1 N N N N N N 8.683 17.779 -5.396 1.073 -0.357 -1.187 HB2 AAR 16
AAR HB3 2HB H 0 1 N N N N N N 10.096 17.055 -4.629 1.061 -1.290 0.329 HB3 AAR 17
AAR HG2 1HG H 0 1 N N N N N N 11.240 17.405 -6.540 -0.218 0.524 1.434 HG2 AAR 18
AAR HG3 2HG H 0 1 N N N N N N 11.082 19.140 -6.268 -0.206 1.456 -0.082 HG3 AAR 19
AAR HD2 1HD H 0 1 N N N N N N 8.933 17.474 -7.605 -1.425 -0.378 -1.220 HD2 AAR 20
AAR HD3 2HD H 0 1 N N N N N N 10.199 18.309 -8.504 -1.437 -1.311 0.296 HD3 AAR 21
AAR HE HE H 0 1 N N N N N N 8.000 19.617 -6.995 -2.573 1.225 0.802 HE AAR 22
AAR HH11 1HH1 H 0 0 N N N N N N 8.513 20.086 -9.915 -3.186 -1.697 -1.001 HH11 AAR 23
AAR HH12 2HH1 H 0 0 N N N N N N 9.330 21.612 -9.895 -4.861 -1.580 -0.942 HH12 AAR 24
AAR HH21 1HH2 H 0 0 N N N N N N 10.069 21.458 -6.508 -5.856 0.196 0.143 HH21 AAR 25
AAR HH22 2HH2 H 0 0 N N N N N N 10.215 22.392 -7.958 -4.905 1.373 0.875 HH22 AAR 26
AAR HNT1 1HNT H 0 0 N N N N N N 9.248 21.379 -2.992 3.376 -1.578 1.612 HNT1 AAR 27
AAR HNT2 2HNT H 0 0 N N N N N N 7.710 21.714 -3.670 4.702 -1.856 0.619 HNT2 AAR 28
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
AAR N CA SING N N 1
AAR N H SING N N 2
AAR N H2 SING N N 3
AAR CA CB SING N N 4
AAR CA C SING N N 5
AAR CA HA SING N N 6
AAR CB CG SING N N 7
AAR CB HB2 SING N N 8
AAR CB HB3 SING N N 9
AAR CG CD SING N N 10
AAR CG HG2 SING N N 11
AAR CG HG3 SING N N 12
AAR CD NE SING N N 13
AAR CD HD2 SING N N 14
AAR CD HD3 SING N N 15
AAR NE CZ SING N N 16
AAR NE HE SING N N 17
AAR CZ NH1 SING N N 18
AAR CZ NH2 DOUB N N 19
AAR NH1 HH11 SING N N 20
AAR NH1 HH12 SING N N 21
AAR NH2 HH21 SING N N 22
AAR NH2 HH22 SING N N 23
AAR C O DOUB N N 24
AAR C NT SING N N 25
AAR NT HNT1 SING N N 26
AAR NT HNT2 SING N N 27
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
AAR SMILES ACDLabs 10.04 "O=C(N)C(N)CCCN\C(=[NH2+])N"
AAR SMILES_CANONICAL CACTVS 3.341 "N[C@@H](CCCNC(N)=[NH2+])C(N)=O"
AAR SMILES CACTVS 3.341 "N[CH](CCCNC(N)=[NH2+])C(N)=O"
AAR SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C(C[C@@H](C(=O)N)N)CNC(=[NH2+])N"
AAR SMILES "OpenEye OEToolkits" 1.5.0 "C(CC(C(=O)N)N)CNC(=[NH2+])N"
AAR InChI InChI 1.03 "InChI=1S/C6H15N5O/c7-4(5(8)12)2-1-3-11-6(9)10/h4H,1-3,7H2,(H2,8,12)(H4,9,10,11)/p+1/t4-/m0/s1"
AAR InChIKey InChI 1.03 ULEBESPCVWBNIF-BYPYZUCNSA-O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
AAR "SYSTEMATIC NAME" ACDLabs 10.04 "amino{[(4S)-4,5-diamino-5-oxopentyl]amino}methaniminium"
AAR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[amino-[[(4S)-4,5-diamino-5-oxo-pentyl]amino]methylidene]azanium"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
AAR "Create component" 1999-07-08 RCSB
AAR "Modify descriptor" 2011-06-04 RCSB
AAR "Modify PCM" 2024-09-27 PDBE
#