data_ABE
#

_chem_comp.id                                   ABE
_chem_comp.name                                 alpha-D-Abequopyranose
_chem_comp.type                                 "D-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H12 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;alpha-D-Abequose; 3,6-dideoxy-alpha-D-xylo-hexopyranose; 3,6-dideoxy-alpha-D-gulopyranose;
3,6-dideoxy-alpha-D-galactopyranose; 3-deoxy-alpha-D-fucopyranose; D-Abequose; Abequose
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-07-08
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       148.157
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    ABE
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1MFA
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  ABE  alpha-D-Abequose                         PDB  ?  
2  ABE  "3,6-dideoxy-alpha-D-xylo-hexopyranose"  PDB  ?  
3  ABE  "3,6-dideoxy-alpha-D-gulopyranose"       PDB  ?  
4  ABE  "3,6-dideoxy-alpha-D-galactopyranose"    PDB  ?  
5  ABE  3-deoxy-alpha-D-fucopyranose             PDB  ?  
6  ABE  D-Abequose                               PDB  ?  
7  ABE  Abequose                                 PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ABE  C1   C1   C  0  1  N  N  S  13.727   -9.324  60.732   0.906  -0.545  -0.884  C1   ABE   1  
ABE  C2   C2   C  0  1  N  N  R  14.894   -8.388  60.961  -0.552  -0.352  -1.305  C2   ABE   2  
ABE  C3   C3   C  0  1  N  N  N  14.386   -7.023  61.420  -1.146   0.824  -0.522  C3   ABE   3  
ABE  C4   C4   C  0  1  N  N  R  13.388   -6.513  60.376  -0.926   0.577   0.974  C4   ABE   4  
ABE  C5   C5   C  0  1  N  N  R  12.217   -7.492  60.277   0.560   0.315   1.222  C5   ABE   5  
ABE  C6   C6   C  0  1  N  N  N  11.194   -7.030  59.224   0.795   0.102   2.719  C6   ABE   6  
ABE  O1   O1   O  0  1  N  Y  N  13.177   -9.668  62.031   1.636   0.655  -1.143  O1   ABE   7  
ABE  O2   O2   O  0  1  N  N  N  15.716   -8.973  61.951  -0.613  -0.076  -2.706  O2   ABE   8  
ABE  O4   O4   O  0  1  N  N  N  14.026   -6.378  59.100  -1.691  -0.556   1.388  O4   ABE   9  
ABE  O5   O5   O  0  1  N  N  N  12.736   -8.770  59.890   0.971  -0.848   0.507  O5   ABE  10  
ABE  H1   H1   H  0  1  N  N  N  14.090  -10.234  60.201   1.342  -1.365  -1.454  H1   ABE  11  
ABE  H2   H2   H  0  1  N  N  N  15.472   -8.234  60.020  -1.118  -1.257  -1.087  H2   ABE  12  
ABE  H31  H31  H  0  1  N  N  N  13.958   -7.045  62.449  -0.650   1.748  -0.818  H31  ABE  13  
ABE  H32  H32  H  0  1  N  N  N  15.211   -6.299  61.616  -2.214   0.898  -0.728  H32  ABE  14  
ABE  H4   H4   H  0  1  N  N  N  13.010   -5.511  60.687  -1.240   1.455   1.538  H4   ABE  15  
ABE  H5   H5   H  0  1  N  N  N  11.702   -7.545  61.264   1.141   1.173   0.883  H5   ABE  16  
ABE  H61  H61  H  0  1  N  N  N  10.340   -7.743  59.151   1.855  -0.081   2.898  H61  ABE  17  
ABE  H62  H62  H  0  1  N  N  N  10.843   -5.990  59.421   0.484   0.992   3.266  H62  ABE  18  
ABE  H63  H63  H  0  1  N  N  N  11.673   -6.862  58.231   0.215  -0.755   3.060  H63  ABE  19  
ABE  HO1  HO1  H  0  1  N  Y  N  12.444  -10.255  61.887   2.549   0.491  -0.869  HO1  ABE  20  
ABE  HO2  HO2  H  0  1  N  Y  N  16.448   -8.385  62.094  -0.223  -0.837  -3.158  HO2  ABE  21  
ABE  HO4  HO4  H  0  1  N  Y  N  13.407   -6.061  58.452  -2.618  -0.349   1.208  HO4  ABE  22  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ABE  C1  C2   SING  N  N   1  
ABE  C1  O1   SING  N  N   2  
ABE  C1  O5   SING  N  N   3  
ABE  C1  H1   SING  N  N   4  
ABE  C2  C3   SING  N  N   5  
ABE  C2  O2   SING  N  N   6  
ABE  C2  H2   SING  N  N   7  
ABE  C3  C4   SING  N  N   8  
ABE  C3  H31  SING  N  N   9  
ABE  C3  H32  SING  N  N  10  
ABE  C4  C5   SING  N  N  11  
ABE  C4  O4   SING  N  N  12  
ABE  C4  H4   SING  N  N  13  
ABE  C5  C6   SING  N  N  14  
ABE  C5  O5   SING  N  N  15  
ABE  C5  H5   SING  N  N  16  
ABE  C6  H61  SING  N  N  17  
ABE  C6  H62  SING  N  N  18  
ABE  C6  H63  SING  N  N  19  
ABE  O1  HO1  SING  N  N  20  
ABE  O2  HO2  SING  N  N  21  
ABE  O4  HO4  SING  N  N  22  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ABE  SMILES            ACDLabs               10.04  "OC1C(OC(O)C(O)C1)C"  
ABE  SMILES_CANONICAL  CACTVS                3.341  "C[C@H]1O[C@H](O)[C@H](O)C[C@H]1O"  
ABE  SMILES            CACTVS                3.341  "C[CH]1O[CH](O)[CH](O)C[CH]1O"  
ABE  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C[C@@H]1[C@@H](C[C@H]([C@H](O1)O)O)O"  
ABE  SMILES            "OpenEye OEToolkits"  1.5.0  "CC1C(CC(C(O1)O)O)O"  
ABE  InChI             InChI                 1.03   "InChI=1S/C6H12O4/c1-3-4(7)2-5(8)6(9)10-3/h3-9H,2H2,1H3/t3-,4-,5-,6+/m1/s1"  
ABE  InChIKey          InChI                 1.03   KYPWIZMAJMNPMJ-KAZBKCHUSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ABE  "SYSTEMATIC NAME"                      ACDLabs               10.04  "3,6-dideoxy-alpha-D-xylo-hexopyranose"  
ABE  "SYSTEMATIC NAME"                      "OpenEye OEToolkits"  1.5.0  "(2S,3R,5R,6R)-6-methyloxane-2,3,5-triol"  
ABE  "CONDENSED IUPAC CARBOHYDRATE SYMBOL"  GMML                  1.0    DAbea  
ABE  "COMMON NAME"                          GMML                  1.0    a-D-Abequopyranose  
ABE  "IUPAC CARBOHYDRATE SYMBOL"            PDB-CARE              1.0    a-D-3-deoxy-Fucp  
ABE  "SNFG CARBOHYDRATE SYMBOL"             GMML                  1.0    Abe  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
ABE  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
ABE  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
ABE  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
ABE  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ABE  "Create component"    1999-07-08  RCSB  
ABE  "Modify descriptor"   2011-06-04  RCSB  
ABE  "Other modification"  2019-08-12  RCSB  
ABE  "Other modification"  2019-12-19  RCSB  
ABE  "Other modification"  2020-07-03  RCSB  
ABE  "Modify name"         2020-07-17  RCSB  
ABE  "Modify synonyms"     2020-07-17  RCSB  
##