data_ADN # _chem_comp.id ADN _chem_comp.name ADENOSINE _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H13 N5 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 267.241 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ADN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1BX4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ADN "O5'" O5* O 0 1 N N N 41.304 18.534 40.336 -2.224 0.992 -4.318 "O5'" ADN 1 ADN "C5'" C5* C 0 1 N N N 40.267 18.968 39.461 -1.228 -0.026 -4.200 "C5'" ADN 2 ADN "C4'" C4* C 0 1 N N R 40.492 18.124 38.214 -0.217 0.372 -3.123 "C4'" ADN 3 ADN "O4'" O4* O 0 1 N N N 40.463 16.696 38.532 -0.871 0.501 -1.842 "O4'" ADN 4 ADN "C3'" C3* C 0 1 N N S 39.323 18.273 37.235 0.826 -0.748 -2.921 "C3'" ADN 5 ADN "O3'" O3* O 0 1 N N N 39.772 19.164 36.205 2.023 -0.455 -3.645 "O3'" ADN 6 ADN "C2'" C2* C 0 1 N N R 39.068 16.862 36.663 1.097 -0.740 -1.398 "C2'" ADN 7 ADN "O2'" O2* O 0 1 N Y N 38.967 16.826 35.235 2.470 -0.444 -1.136 "O2'" ADN 8 ADN "C1'" C1* C 0 1 N N R 40.233 16.066 37.280 0.182 0.382 -0.862 "C1'" ADN 9 ADN N9 N9 N 0 1 Y N N 40.065 14.598 37.304 -0.372 0.009 0.440 N9 ADN 10 ADN C8 C8 C 0 1 Y N N 39.114 13.871 38.035 -1.525 -0.685 0.657 C8 ADN 11 ADN N7 N7 N 0 1 Y N N 39.167 12.571 37.855 -1.717 -0.841 1.935 N7 ADN 12 ADN C5 C5 C 0 1 Y N N 40.222 12.408 36.942 -0.699 -0.262 2.617 C5 ADN 13 ADN C6 C6 C 0 1 Y N N 40.806 11.250 36.309 -0.383 -0.109 3.978 C6 ADN 14 ADN N6 N6 N 0 1 N N N 40.384 10.000 36.521 -1.206 -0.632 4.959 N6 ADN 15 ADN N1 N1 N 0 1 Y N N 41.834 11.467 35.456 0.728 0.543 4.300 N1 ADN 16 ADN C2 C2 C 0 1 Y N N 42.267 12.717 35.240 1.520 1.045 3.370 C2 ADN 17 ADN N3 N3 N 0 1 Y N N 41.808 13.867 35.762 1.261 0.932 2.084 N3 ADN 18 ADN C4 C4 C 0 1 Y N N 40.782 13.641 36.606 0.172 0.295 1.667 C4 ADN 19 ADN "HO5'" *HO5 H 0 0 N N N 41.163 19.060 41.114 -2.839 0.702 -5.006 "HO5'" ADN 20 ADN "H5'1" 1H5* H 0 0 N N N 39.239 18.900 39.888 -0.714 -0.145 -5.154 "H5'1" ADN 21 ADN "H5'2" 2H5* H 0 0 N N N 40.242 20.067 39.279 -1.702 -0.967 -3.923 "H5'2" ADN 22 ADN "H4'" H4* H 0 1 N N N 41.468 18.464 37.797 0.276 1.305 -3.393 "H4'" ADN 23 ADN "H3'" H3* H 0 1 N N N 38.389 18.672 37.695 0.419 -1.710 -3.233 "H3'" ADN 24 ADN "HO3'" *HO3 H 0 0 N N N 39.047 19.256 35.597 1.780 -0.413 -4.580 "HO3'" ADN 25 ADN "H2'" H2* H 0 1 N N N 38.075 16.428 36.926 0.823 -1.698 -0.956 "H2'" ADN 26 ADN "HO2'" *HO2 H 0 0 N Y N 38.810 15.957 34.883 2.992 -1.147 -1.546 "HO2'" ADN 27 ADN "H1'" H1* H 0 1 N N N 41.145 16.108 36.639 0.735 1.318 -0.784 "H1'" ADN 28 ADN H8 H8 H 0 1 N N N 38.361 14.300 38.717 -2.182 -1.052 -0.116 H8 ADN 29 ADN HN61 1HN6 H 0 0 N N N 40.796 9.181 36.073 -0.975 -0.523 5.895 HN61 ADN 30 ADN HN62 2HN6 H 0 0 N N N 39.384 9.981 36.320 -2.017 -1.104 4.712 HN62 ADN 31 ADN H2 H2 H 0 1 N N N 43.113 12.811 34.539 2.413 1.569 3.676 H2 ADN 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ADN "O5'" "C5'" SING N N 1 ADN "O5'" "HO5'" SING N N 2 ADN "C5'" "C4'" SING N N 3 ADN "C5'" "H5'1" SING N N 4 ADN "C5'" "H5'2" SING N N 5 ADN "C4'" "O4'" SING N N 6 ADN "C4'" "C3'" SING N N 7 ADN "C4'" "H4'" SING N N 8 ADN "O4'" "C1'" SING N N 9 ADN "C3'" "O3'" SING N N 10 ADN "C3'" "C2'" SING N N 11 ADN "C3'" "H3'" SING N N 12 ADN "O3'" "HO3'" SING N N 13 ADN "C2'" "O2'" SING N N 14 ADN "C2'" "C1'" SING N N 15 ADN "C2'" "H2'" SING N N 16 ADN "O2'" "HO2'" SING N N 17 ADN "C1'" N9 SING N N 18 ADN "C1'" "H1'" SING N N 19 ADN N9 C8 SING Y N 20 ADN N9 C4 SING Y N 21 ADN C8 N7 DOUB Y N 22 ADN C8 H8 SING N N 23 ADN N7 C5 SING Y N 24 ADN C5 C6 SING Y N 25 ADN C5 C4 DOUB Y N 26 ADN C6 N6 SING N N 27 ADN C6 N1 DOUB Y N 28 ADN N6 HN61 SING N N 29 ADN N6 HN62 SING N N 30 ADN N1 C2 SING Y N 31 ADN C2 N3 DOUB Y N 32 ADN C2 H2 SING N N 33 ADN N3 C4 SING Y N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ADN SMILES ACDLabs 10.04 "n2c1c(ncnc1n(c2)C3OC(C(O)C3O)CO)N" ADN SMILES_CANONICAL CACTVS 3.341 "Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O" ADN SMILES CACTVS 3.341 "Nc1ncnc2n(cnc12)[CH]3O[CH](CO)[CH](O)[CH]3O" ADN SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O)N" ADN SMILES "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)CO)O)O)N" ADN InChI InChI 1.03 "InChI=1S/C10H13N5O4/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(18)6(17)4(1-16)19-10/h2-4,6-7,10,16-18H,1H2,(H2,11,12,13)/t4-,6-,7-,10-/m1/s1" ADN InChIKey InChI 1.03 OIRDTQYFTABQOQ-KQYNXXCUSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ADN "SYSTEMATIC NAME" ACDLabs 10.04 adenosine ADN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,3R,4S,5R)-2-(6-aminopurin-9-yl)-5-(hydroxymethyl)oxolane-3,4-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ADN "Create component" 1999-07-08 RCSB ADN "Modify descriptor" 2011-06-04 RCSB #