data_AFY # _chem_comp.id AFY _chem_comp.name "(3-{[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl]sulfanyl}oxetan-3-yl)acetic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H29 N2 O10 P S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-07-17 _chem_comp.pdbx_modified_date 2018-04-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 472.448 _chem_comp.one_letter_code ? _chem_comp.three_letter_code AFY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5WGC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal AFY C10 C1 C 0 1 N N N 47.700 -22.339 7.215 -5.282 0.195 -0.319 C10 AFY 1 AFY C12 C2 C 0 1 N N N 44.759 -22.483 6.251 -8.080 -0.175 -0.632 C12 AFY 2 AFY C13 C3 C 0 1 N N N 44.934 -23.849 5.873 -8.168 0.551 -1.988 C13 AFY 3 AFY C15 C4 C 0 1 N N N 45.102 -22.092 4.893 -9.519 0.323 -0.396 C15 AFY 4 AFY C16 C5 C 0 1 N N N 43.285 -22.207 6.601 -7.964 -1.696 -0.753 C16 AFY 5 AFY C22 C6 C 0 1 N N N 52.275 -20.136 0.604 5.357 0.506 0.335 C22 AFY 6 AFY C17 C7 C 0 1 N N N 42.480 -21.296 5.678 -8.303 -2.332 0.571 C17 AFY 7 AFY P27 P1 P 0 1 N N N 55.682 -18.440 -0.276 8.888 -1.204 -0.247 P27 AFY 8 AFY O01 O1 O 0 1 N N N 54.141 -20.898 2.052 4.190 0.842 -1.754 O01 AFY 9 AFY C02 C8 C 0 1 N N R 52.768 -20.858 1.857 4.451 1.432 -0.479 C02 AFY 10 AFY C03 C9 C 0 1 N N N 52.081 -20.506 3.162 3.152 1.637 0.256 C03 AFY 11 AFY N04 N1 N 0 1 N N N 50.647 -20.425 3.193 2.003 1.153 -0.258 N04 AFY 12 AFY C05 C10 C 0 1 N N N 49.982 -20.117 4.421 0.729 1.432 0.407 C05 AFY 13 AFY C06 C11 C 0 1 N N N 49.898 -21.406 5.217 -0.410 0.772 -0.374 C06 AFY 14 AFY C07 C12 C 0 1 N N N 50.648 -21.534 6.525 -1.721 1.059 0.310 C07 AFY 15 AFY N08 N2 N 0 1 N N N 49.908 -21.405 7.756 -2.869 0.576 -0.203 N08 AFY 16 AFY C09 C13 C 0 1 N N N 48.493 -21.151 7.738 -4.144 0.855 0.462 C09 AFY 17 AFY S11 S1 S 0 1 N N N 45.971 -21.921 7.504 -6.861 0.541 0.505 S11 AFY 18 AFY O14 O2 O 0 1 N N N 45.582 -23.400 4.644 -9.202 1.342 -1.369 O14 AFY 19 AFY O18 O3 O 0 1 N N N 42.310 -20.075 5.952 -8.363 -3.668 0.678 O18 AFY 20 AFY O19 O4 O 0 1 N N N 41.981 -21.775 4.638 -8.521 -1.638 1.536 O19 AFY 21 AFY O20 O5 O 0 1 N N N 51.810 -21.742 6.541 -1.743 1.726 1.324 O20 AFY 22 AFY O21 O6 O 0 1 N N N 52.723 -20.309 4.132 3.139 2.237 1.310 O21 AFY 23 AFY C23 C14 C 0 1 N N N 51.641 -18.802 0.929 5.742 1.193 1.647 C23 AFY 24 AFY C24 C15 C 0 1 N N N 51.252 -21.028 -0.103 4.614 -0.796 0.640 C24 AFY 25 AFY C25 C16 C 0 1 N N N 53.439 -19.855 -0.334 6.622 0.194 -0.468 C25 AFY 26 AFY O26 O7 O 0 1 N N N 54.274 -18.997 0.365 7.468 -0.671 0.292 O26 AFY 27 AFY O28 O8 O 0 1 N N N 55.525 -17.089 -0.950 9.623 -2.042 0.915 O28 AFY 28 AFY O29 O9 O 0 1 N N N 56.570 -18.186 0.893 8.655 -2.152 -1.527 O29 AFY 29 AFY O30 O10 O 0 1 N N N 56.317 -19.413 -1.224 9.733 -0.052 -0.633 O30 AFY 30 AFY H1 H1 H 0 1 N N N 47.972 -23.254 7.761 -5.307 0.595 -1.333 H1 AFY 31 AFY H2 H2 H 0 1 N N N 47.887 -22.484 6.141 -5.121 -0.882 -0.357 H2 AFY 32 AFY H3 H3 H 0 1 N N N 43.995 -24.399 5.715 -7.273 1.118 -2.243 H3 AFY 33 AFY H4 H4 H 0 1 N N N 45.587 -24.425 6.545 -8.521 -0.079 -2.804 H4 AFY 34 AFY H5 H5 H 0 1 N N N 45.873 -21.310 4.831 -10.287 -0.377 -0.725 H5 AFY 35 AFY H6 H6 H 0 1 N N N 44.238 -21.805 4.276 -9.693 0.706 0.609 H6 AFY 36 AFY H7 H7 H 0 1 N N N 43.268 -21.753 7.603 -8.656 -2.054 -1.515 H7 AFY 37 AFY H8 H8 H 0 1 N N N 42.770 -23.178 6.630 -6.945 -1.962 -1.033 H8 AFY 38 AFY H9 H9 H 0 1 N N N 54.339 -20.693 2.958 3.750 -0.018 -1.707 H9 AFY 39 AFY H10 H10 H 0 1 N N N 52.475 -21.904 1.684 4.946 2.393 -0.618 H10 AFY 40 AFY H11 H11 H 0 1 N N N 50.117 -20.583 2.360 2.021 0.620 -1.068 H11 AFY 41 AFY H12 H12 H 0 1 N N N 50.555 -19.364 4.982 0.753 1.032 1.421 H12 AFY 42 AFY H13 H13 H 0 1 N N N 48.972 -19.733 4.217 0.567 2.509 0.445 H13 AFY 43 AFY H14 H14 H 0 1 N N N 48.834 -21.572 5.443 -0.434 1.172 -1.388 H14 AFY 44 AFY H15 H15 H 0 1 N N N 50.263 -22.210 4.561 -0.248 -0.305 -0.412 H15 AFY 45 AFY H16 H16 H 0 1 N N N 50.384 -21.493 8.631 -2.852 0.043 -1.013 H16 AFY 46 AFY H17 H17 H 0 1 N N N 48.298 -20.283 7.091 -4.306 1.932 0.500 H17 AFY 47 AFY H18 H18 H 0 1 N N N 48.161 -20.927 8.762 -4.120 0.455 1.476 H18 AFY 48 AFY H19 H19 H 0 1 N N N 41.786 -19.668 5.273 -8.584 -4.030 1.547 H19 AFY 49 AFY H20 H20 H 0 1 N N N 50.790 -18.956 1.609 4.859 1.291 2.278 H20 AFY 50 AFY H21 H21 H 0 1 N N N 52.384 -18.151 1.414 6.494 0.595 2.163 H21 AFY 51 AFY H22 H22 H 0 1 N N N 51.288 -18.328 0.001 6.148 2.182 1.433 H22 AFY 52 AFY H23 H23 H 0 1 N N N 50.410 -21.231 0.576 3.713 -0.574 1.212 H23 AFY 53 AFY H24 H24 H 0 1 N N N 50.881 -20.517 -1.004 4.339 -1.286 -0.294 H24 AFY 54 AFY H25 H25 H 0 1 N N N 51.729 -21.977 -0.389 5.259 -1.456 1.220 H25 AFY 55 AFY H26 H26 H 0 1 N N N 53.082 -19.377 -1.258 6.347 -0.295 -1.403 H26 AFY 56 AFY H27 H27 H 0 1 N N N 53.966 -20.788 -0.583 7.152 1.122 -0.686 H27 AFY 57 AFY H28 H28 H 0 1 N N N 55.862 -17.136 -1.837 10.486 -2.395 0.660 H28 AFY 58 AFY H29 H29 H 0 1 N N N 57.367 -18.695 0.803 8.108 -2.929 -1.347 H29 AFY 59 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AFY O30 P27 DOUB N N 1 AFY O28 P27 SING N N 2 AFY C25 O26 SING N N 3 AFY C25 C22 SING N N 4 AFY P27 O26 SING N N 5 AFY P27 O29 SING N N 6 AFY C24 C22 SING N N 7 AFY C22 C23 SING N N 8 AFY C22 C02 SING N N 9 AFY C02 O01 SING N N 10 AFY C02 C03 SING N N 11 AFY C03 N04 SING N N 12 AFY C03 O21 DOUB N N 13 AFY N04 C05 SING N N 14 AFY C05 C06 SING N N 15 AFY O19 C17 DOUB N N 16 AFY O14 C15 SING N N 17 AFY O14 C13 SING N N 18 AFY C15 C12 SING N N 19 AFY C06 C07 SING N N 20 AFY C17 O18 SING N N 21 AFY C17 C16 SING N N 22 AFY C13 C12 SING N N 23 AFY C12 C16 SING N N 24 AFY C12 S11 SING N N 25 AFY C07 O20 DOUB N N 26 AFY C07 N08 SING N N 27 AFY C10 S11 SING N N 28 AFY C10 C09 SING N N 29 AFY C09 N08 SING N N 30 AFY C10 H1 SING N N 31 AFY C10 H2 SING N N 32 AFY C13 H3 SING N N 33 AFY C13 H4 SING N N 34 AFY C15 H5 SING N N 35 AFY C15 H6 SING N N 36 AFY C16 H7 SING N N 37 AFY C16 H8 SING N N 38 AFY O01 H9 SING N N 39 AFY C02 H10 SING N N 40 AFY N04 H11 SING N N 41 AFY C05 H12 SING N N 42 AFY C05 H13 SING N N 43 AFY C06 H14 SING N N 44 AFY C06 H15 SING N N 45 AFY N08 H16 SING N N 46 AFY C09 H17 SING N N 47 AFY C09 H18 SING N N 48 AFY O18 H19 SING N N 49 AFY C23 H20 SING N N 50 AFY C23 H21 SING N N 51 AFY C23 H22 SING N N 52 AFY C24 H23 SING N N 53 AFY C24 H24 SING N N 54 AFY C24 H25 SING N N 55 AFY C25 H26 SING N N 56 AFY C25 H27 SING N N 57 AFY O28 H28 SING N N 58 AFY O29 H29 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor AFY SMILES ACDLabs 12.01 "C(SC1(CC(O)=O)COC1)CNC(CCNC(C(C(C)(C)COP(O)(O)=O)O)=O)=O" AFY InChI InChI 1.03 "InChI=1S/C16H29N2O10PS/c1-15(2,8-28-29(24,25)26)13(22)14(23)18-4-3-11(19)17-5-6-30-16(7-12(20)21)9-27-10-16/h13,22H,3-10H2,1-2H3,(H,17,19)(H,18,23)(H,20,21)(H2,24,25,26)/t13-/m0/s1" AFY InChIKey InChI 1.03 WYVQKYVITQEIME-ZDUSSCGKSA-N AFY SMILES_CANONICAL CACTVS 3.385 "CC(C)(CO[P](O)(O)=O)[C@@H](O)C(=O)NCCC(=O)NCCSC1(COC1)CC(O)=O" AFY SMILES CACTVS 3.385 "CC(C)(CO[P](O)(O)=O)[CH](O)C(=O)NCCC(=O)NCCSC1(COC1)CC(O)=O" AFY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC(C)(COP(=O)(O)O)[C@H](C(=O)NCCC(=O)NCCSC1(COC1)CC(=O)O)O" AFY SMILES "OpenEye OEToolkits" 2.0.6 "CC(C)(COP(=O)(O)O)C(C(=O)NCCC(=O)NCCSC1(COC1)CC(=O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier AFY "SYSTEMATIC NAME" ACDLabs 12.01 "(3-{[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl]sulfanyl}oxetan-3-yl)acetic acid" AFY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "2-[3-[2-[3-[[(2~{R})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethylsulfanyl]oxetan-3-yl]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site AFY "Create component" 2017-07-17 RCSB AFY "Initial release" 2018-04-18 RCSB #