data_AGT # _chem_comp.id AGT _chem_comp.name "S-{(S)-AMINO[(4-AMINOBUTYL)AMINO]METHYL}-L-CYSTEINE" _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C8 H20 N4 O2 S" _chem_comp.mon_nstd_parent_comp_id CYS _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2006-08-17 _chem_comp.pdbx_modified_date 2011-08-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 236.335 _chem_comp.one_letter_code C _chem_comp.three_letter_code AGT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2JER _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal AGT O O O 0 1 N N N 24.295 -3.567 64.540 4.717 -1.410 -1.022 O AGT 1 AGT C C C 0 1 N N N 23.569 -2.965 65.314 3.919 -1.494 -0.119 C AGT 2 AGT CA CA C 0 1 N N R 23.406 -1.438 65.243 3.376 -0.245 0.526 CA AGT 3 AGT N N N 0 1 N N N 22.407 -0.934 66.186 4.276 0.881 0.247 N AGT 4 AGT CB CB C 0 1 N N N 24.759 -0.971 65.658 1.987 0.059 -0.040 CB AGT 5 AGT SG SG S 0 1 N N N 25.749 -1.150 64.155 1.334 1.562 0.737 SG AGT 6 AGT CZ CZ C 0 1 N N S 26.142 0.567 64.542 -0.289 1.755 -0.050 CZ AGT 7 AGT NH2 NH2 N 0 1 N N N 25.182 0.952 65.668 -0.116 1.899 -1.502 NH2 AGT 8 AGT NE NE N 0 1 N N N 27.542 0.562 64.953 -1.113 0.572 0.230 NE AGT 9 AGT CD CD C 0 1 N N N 28.341 -0.434 64.213 -2.527 0.830 -0.075 CD AGT 10 AGT CG CG C 0 1 N N N 29.767 0.027 64.457 -3.351 -0.423 0.229 CG AGT 11 AGT CK CK C 0 1 N N N 30.261 -0.718 65.621 -4.823 -0.154 -0.088 CK AGT 12 AGT CJ CJ C 0 1 N N N 31.403 -1.588 65.112 -5.648 -1.407 0.215 CJ AGT 13 AGT NB NB N 0 1 N N N 32.447 -1.367 66.083 -7.061 -1.148 -0.089 NB AGT 14 AGT OXT OXT O 0 1 N Y N 22.878 -3.589 66.546 3.512 -2.701 0.307 OXT AGT 15 AGT HA HA H 0 1 N N N 23.068 -1.096 64.254 3.304 -0.394 1.604 HA AGT 16 AGT HOT HOT H 0 1 N Y N 23.106 -4.509 66.605 3.885 -3.473 -0.140 HOT AGT 17 AGT HN1 HN1 H 0 1 N N N 22.339 0.060 66.101 5.182 0.733 0.667 HN1 AGT 18 AGT HN2 HN2 H 0 1 N N N 21.519 -1.347 65.983 4.359 1.040 -0.746 HN2 AGT 19 AGT HB HB H 0 1 N N N 24.736 0.073 66.004 2.059 0.208 -1.117 HB AGT 20 AGT HZ HZ H 0 1 N N N 26.026 1.288 63.719 -0.782 2.643 0.346 HZ AGT 21 AGT HH21 HH21 H 0 0 N N N 25.345 1.902 65.936 0.339 1.088 -1.894 HH21 AGT 22 AGT HH22 HH22 H 0 0 N N N 24.239 0.853 65.350 -1.000 2.072 -1.956 HH22 AGT 23 AGT HE HE H 0 1 N N N 27.927 1.469 64.781 -0.775 -0.232 -0.278 HE AGT 24 AGT HDC1 HDC1 H 0 0 N N N 28.172 -1.453 64.591 -2.885 1.658 0.538 HDC1 AGT 25 AGT HDC2 HDC2 H 0 0 N N N 28.093 -0.440 63.141 -2.630 1.086 -1.129 HDC2 AGT 26 AGT HGC1 HGC1 H 0 0 N N N 30.392 -0.181 63.576 -2.993 -1.251 -0.383 HGC1 AGT 27 AGT HGC2 HGC2 H 0 0 N N N 29.791 1.108 64.656 -3.247 -0.679 1.283 HGC2 AGT 28 AGT HKC1 HKC1 H 0 0 N N N 30.617 -0.028 66.400 -5.181 0.674 0.524 HKC1 AGT 29 AGT HKC2 HKC2 H 0 0 N N N 29.462 -1.340 66.050 -4.927 0.103 -1.143 HKC2 AGT 30 AGT HJC1 HJC1 H 0 0 N N N 31.113 -2.648 65.063 -5.289 -2.234 -0.397 HJC1 AGT 31 AGT HJC2 HJC2 H 0 0 N N N 31.720 -1.289 64.102 -5.544 -1.663 1.270 HJC2 AGT 32 AGT HBN1 HBN1 H 0 0 N N N 33.253 -1.903 65.834 -7.176 -0.846 -1.045 HBN1 AGT 33 AGT HBN2 HBN2 H 0 0 N N N 32.685 -0.396 66.101 -7.627 -1.961 0.103 HBN2 AGT 34 AGT HB2 HB2 H 0 1 N N N 25.161 -1.581 66.480 1.319 -0.777 0.168 HB2 AGT 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AGT O C DOUB N N 1 AGT C CA SING N N 2 AGT C OXT SING N N 3 AGT CA N SING N N 4 AGT CA CB SING N N 5 AGT CA HA SING N N 6 AGT N HN1 SING N N 7 AGT N HN2 SING N N 8 AGT CB SG SING N N 9 AGT CB HB SING N N 10 AGT CB HB2 SING N N 11 AGT SG CZ SING N N 12 AGT CZ NH2 SING N N 13 AGT CZ NE SING N N 14 AGT CZ HZ SING N N 15 AGT NH2 HH21 SING N N 16 AGT NH2 HH22 SING N N 17 AGT NE CD SING N N 18 AGT NE HE SING N N 19 AGT CD CG SING N N 20 AGT CD HDC1 SING N N 21 AGT CD HDC2 SING N N 22 AGT CG CK SING N N 23 AGT CG HGC1 SING N N 24 AGT CG HGC2 SING N N 25 AGT CK CJ SING N N 26 AGT CK HKC1 SING N N 27 AGT CK HKC2 SING N N 28 AGT CJ NB SING N N 29 AGT CJ HJC1 SING N N 30 AGT CJ HJC2 SING N N 31 AGT NB HBN1 SING N N 32 AGT NB HBN2 SING N N 33 AGT OXT HOT SING N N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor AGT SMILES ACDLabs 12.01 "O=C(O)C(N)CSC(NCCCCN)N" AGT InChI InChI 1.03 "InChI=1S/C8H20N4O2S/c9-3-1-2-4-12-8(11)15-5-6(10)7(13)14/h6,8,12H,1-5,9-11H2,(H,13,14)/t6-,8-/m0/s1" AGT InChIKey InChI 1.03 GZLBOQUKGXMSFX-XPUUQOCRSA-N AGT SMILES_CANONICAL CACTVS 3.370 "NCCCCN[C@H](N)SC[C@H](N)C(O)=O" AGT SMILES CACTVS 3.370 "NCCCCN[CH](N)SC[CH](N)C(O)=O" AGT SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "C(CCN[C@H](N)SC[C@@H](C(=O)O)N)CN" AGT SMILES "OpenEye OEToolkits" 1.7.2 "C(CCNC(N)SCC(C(=O)O)N)CN" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier AGT "SYSTEMATIC NAME" ACDLabs 12.01 "S-{(S)-amino[(4-aminobutyl)amino]methyl}-L-cysteine" AGT "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "(2R)-2-azanyl-3-[(S)-azanyl-(4-azanylbutylamino)methyl]sulfanyl-propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site AGT "Create component" 2006-08-17 EBI AGT "Modify descriptor" 2011-06-04 RCSB AGT "Modify parent residue" 2011-08-04 RCSB #