data_AHM # _chem_comp.id AHM _chem_comp.name "2,5-anhydro-1,6-di-O-phosphono-D-mannitol" _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H14 O11 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "2,5-ANHYDROMANNITOL-1,6-DIPHOSPHATE" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 324.116 _chem_comp.one_letter_code ? _chem_comp.three_letter_code AHM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1FBF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id AHM _pdbx_chem_comp_synonyms.name "2,5-ANHYDROMANNITOL-1,6-DIPHOSPHATE" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal AHM P1 P1 P 0 1 N N N 40.586 89.032 26.093 -1.181 -0.098 -4.059 P1 AHM 1 AHM O1P O1P O 0 1 N N N 41.669 90.045 26.166 -0.907 -1.541 -4.243 O1P AHM 2 AHM O2P O2P O 0 1 N N N 40.938 87.606 25.800 -2.743 0.188 -4.321 O2P AHM 3 AHM O3P O3P O 0 1 N N N 39.786 89.127 27.470 -0.296 0.752 -5.101 O3P AHM 4 AHM O1 O1 O 0 1 N N N 39.507 89.428 24.983 -0.801 0.332 -2.555 O1 AHM 5 AHM C1 C1 C 0 1 N N N 38.645 90.553 25.151 0.590 0.054 -2.385 C1 AHM 6 AHM C2 C2 C 0 1 N N R 37.235 90.055 25.405 1.018 0.443 -0.969 C2 AHM 7 AHM C3 C3 C 0 1 N N S 36.137 90.796 24.641 2.508 0.086 -0.736 C3 AHM 8 AHM O3 O3 O 0 1 N N N 36.051 90.291 23.330 3.365 1.145 -1.169 O3 AHM 9 AHM C4 C4 C 0 1 N N S 34.910 90.551 25.529 2.539 -0.062 0.808 C4 AHM 10 AHM O4 O4 O 0 1 N N N 33.909 91.572 25.497 3.570 -0.965 1.212 O4 AHM 11 AHM C5 C5 C 0 1 N N R 35.525 90.470 26.951 1.142 -0.646 1.109 C5 AHM 12 AHM O5 O5 O 0 1 N N N 36.931 90.288 26.772 0.292 -0.329 0.000 O5 AHM 13 AHM C6 C6 C 0 1 N N N 34.952 89.340 27.757 0.583 -0.021 2.389 C6 AHM 14 AHM O6 O6 O 0 1 N N N 34.188 89.903 28.822 -0.709 -0.566 2.660 O6 AHM 15 AHM P2 P2 P 0 1 N N N 32.753 89.271 29.248 -1.234 0.131 4.013 P2 AHM 16 AHM O4P O4P O 0 1 N N N 32.896 87.756 29.230 -1.314 1.596 3.813 O4P AHM 17 AHM O5P O5P O 0 1 N N N 31.708 89.760 28.254 -2.694 -0.439 4.379 O5P AHM 18 AHM O6P O6P O 0 1 N N N 32.546 89.866 30.627 -0.214 -0.191 5.215 O6P AHM 19 AHM HOP2 HOP2 H 0 0 N N N 40.245 86.958 25.753 -2.928 -0.082 -5.231 HOP2 AHM 20 AHM HOP3 HOP3 H 0 0 N N N 39.093 88.479 27.423 -0.504 1.684 -4.948 HOP3 AHM 21 AHM H11 H11 H 0 1 N N N 38.698 91.262 24.292 1.167 0.629 -3.110 H11 AHM 22 AHM H12 H12 H 0 1 N N N 39.001 91.247 25.947 0.769 -1.009 -2.540 H12 AHM 23 AHM H2 H2 H 0 1 N N N 37.238 88.988 25.082 0.855 1.507 -0.804 H2 AHM 24 AHM H3 H3 H 0 1 N N N 36.293 91.888 24.481 2.769 -0.851 -1.226 H3 AHM 25 AHM HO3 HO3 H 0 1 N N N 35.369 90.751 22.855 4.268 0.882 -0.946 HO3 AHM 26 AHM H4 H4 H 0 1 N N N 34.362 89.644 25.181 2.666 0.907 1.289 H4 AHM 27 AHM HO4 HO4 H 0 1 N N N 33.149 91.420 26.047 4.408 -0.583 0.916 HO4 AHM 28 AHM H5 H5 H 0 1 N N N 35.293 91.401 27.519 1.210 -1.727 1.226 H5 AHM 29 AHM H61 H61 H 0 1 N N N 35.731 88.627 28.115 1.251 -0.238 3.222 H61 AHM 30 AHM H62 H62 H 0 1 N N N 34.366 88.622 27.138 0.502 1.058 2.261 H62 AHM 31 AHM HOP5 HOP5 H 0 0 N N N 30.869 89.391 28.503 -2.971 0.003 5.193 HOP5 AHM 32 AHM HOP6 HOP6 H 0 0 N N N 31.707 89.497 30.876 -0.191 -1.153 5.312 HOP6 AHM 33 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AHM P1 O1P DOUB N N 1 AHM P1 O2P SING N N 2 AHM P1 O3P SING N N 3 AHM P1 O1 SING N N 4 AHM O2P HOP2 SING N N 5 AHM O3P HOP3 SING N N 6 AHM O1 C1 SING N N 7 AHM C1 C2 SING N N 8 AHM C1 H11 SING N N 9 AHM C1 H12 SING N N 10 AHM C2 C3 SING N N 11 AHM C2 O5 SING N N 12 AHM C2 H2 SING N N 13 AHM C3 O3 SING N N 14 AHM C3 C4 SING N N 15 AHM C3 H3 SING N N 16 AHM O3 HO3 SING N N 17 AHM C4 O4 SING N N 18 AHM C4 C5 SING N N 19 AHM C4 H4 SING N N 20 AHM O4 HO4 SING N N 21 AHM C5 O5 SING N N 22 AHM C5 C6 SING N N 23 AHM C5 H5 SING N N 24 AHM C6 O6 SING N N 25 AHM C6 H61 SING N N 26 AHM C6 H62 SING N N 27 AHM O6 P2 SING N N 28 AHM P2 O4P DOUB N N 29 AHM P2 O5P SING N N 30 AHM P2 O6P SING N N 31 AHM O5P HOP5 SING N N 32 AHM O6P HOP6 SING N N 33 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor AHM SMILES ACDLabs 10.04 "O=P(OCC1OC(C(O)C1O)COP(=O)(O)O)(O)O" AHM SMILES_CANONICAL CACTVS 3.341 "O[C@H]1[C@H](O)[C@@H](CO[P](O)(O)=O)O[C@@H]1CO[P](O)(O)=O" AHM SMILES CACTVS 3.341 "O[CH]1[CH](O)[CH](CO[P](O)(O)=O)O[CH]1CO[P](O)(O)=O" AHM SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@@H]1[C@H]([C@@H]([C@H](O1)COP(=O)(O)O)O)O)OP(=O)(O)O" AHM SMILES "OpenEye OEToolkits" 1.5.0 "C(C1C(C(C(O1)COP(=O)(O)O)O)O)OP(=O)(O)O" AHM InChI InChI 1.03 "InChI=1S/C6H14O11P2/c7-5-3(1-15-18(9,10)11)17-4(6(5)8)2-16-19(12,13)14/h3-8H,1-2H2,(H2,9,10,11)(H2,12,13,14)/t3-,4-,5-,6-/m1/s1" AHM InChIKey InChI 1.03 WSMBXSQDFPTODV-KVTDHHQDSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier AHM "SYSTEMATIC NAME" ACDLabs 10.04 "2,5-anhydro-1,6-di-O-phosphono-D-mannitol" AHM "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4S,5R)-3,4-dihydroxy-5-(phosphonooxymethyl)oxolan-2-yl]methyl dihydrogen phosphate" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support AHM "CARBOHYDRATE ISOMER" D PDB ? AHM "CARBOHYDRATE RING" furanose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site AHM "Create component" 1999-07-08 RCSB AHM "Modify descriptor" 2011-06-04 RCSB AHM "Other modification" 2020-07-03 RCSB AHM "Modify name" 2020-07-17 RCSB AHM "Modify synonyms" 2020-07-17 RCSB AHM "Modify internal type" 2020-07-17 RCSB AHM "Modify linking type" 2020-07-17 RCSB ##