data_AIX # _chem_comp.id AIX _chem_comp.name "(2R,4S)-2-[(1R)-1-{[(2R)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H21 N3 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "AMPICILLIN (open form)" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-07-02 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 351.421 _chem_comp.one_letter_code ? _chem_comp.three_letter_code AIX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3A3I _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal AIX C8 C8 C 0 1 Y N N N N N 15.682 1.399 6.678 3.828 2.647 -1.263 C8 AIX 1 AIX C5 C5 C 0 1 Y N N N N N 15.526 -0.355 8.347 3.844 0.419 -0.386 C5 AIX 2 AIX C6 C6 C 0 1 N N N N N N 15.765 -3.019 4.538 -3.614 0.042 -0.933 C6 AIX 3 AIX N1 N1 N 0 1 N N N N N N 16.884 -3.362 8.224 1.018 -0.966 -0.067 N1 AIX 4 AIX C2 C2 C 0 1 N N N N N N 18.031 -3.833 3.587 -3.830 1.512 1.051 C2 AIX 5 AIX N3 N3 N 0 1 N N N N N N 16.960 -4.903 5.476 -2.485 -0.488 1.240 N3 AIX 6 AIX C4 C4 C 0 1 N N R N N N 16.236 -1.252 9.281 3.452 -1.032 -0.501 C4 AIX 7 AIX C1 C1 C 0 1 N N N N N N 15.149 -3.484 3.195 -3.760 1.450 -1.513 C1 AIX 8 AIX C3 C3 C 0 1 N N N N N N 15.958 -2.683 8.932 2.250 -1.298 0.367 C3 AIX 9 AIX C7 C7 C 0 1 Y N N N N N 16.305 0.531 7.611 3.470 1.316 -1.369 C7 AIX 10 AIX C9 C9 C 0 1 Y N N N N N 14.295 1.309 6.500 4.566 3.079 -0.177 C9 AIX 11 AIX C10 C10 C 0 1 Y N N N N N 13.511 0.416 7.248 4.945 2.181 0.803 C10 AIX 12 AIX C11 C11 C 0 1 Y N N N N N 14.124 -0.445 8.181 4.586 0.850 0.697 C11 AIX 13 AIX C12 C12 C 0 1 N N S N N N 17.150 -3.635 4.802 -3.678 0.080 0.606 C12 AIX 14 AIX C13 C13 C 0 1 N N R N N N 15.969 -4.933 6.525 -1.276 -0.257 0.402 C13 AIX 15 AIX C14 C14 C 0 1 N N R N N N 16.758 -4.779 7.877 -0.151 -1.224 0.777 C14 AIX 16 AIX C15 C15 C 0 1 N N N N N N 18.204 -5.299 7.631 -0.618 -2.642 0.569 C15 AIX 17 AIX C16 C16 C 0 1 N N N N N N 15.793 -1.517 4.507 -4.691 -0.889 -1.495 C16 AIX 18 AIX N2 N2 N 0 1 N N N N N N 15.835 -1.072 10.659 4.570 -1.877 -0.062 N2 AIX 19 AIX O1 O1 O 0 1 N N N N N N 18.098 -5.006 3.151 -5.035 2.103 1.011 O1 AIX 20 AIX O2 O2 O 0 1 N N N N N N 18.686 -2.869 3.056 -2.868 2.128 1.443 O2 AIX 21 AIX O3 O3 O 0 1 N N N N N N 14.942 -3.191 9.355 2.390 -1.811 1.457 O3 AIX 22 AIX O4 O4 O 0 1 N N N N N N 19.182 -4.517 7.518 -0.034 -3.362 -0.205 O4 AIX 23 AIX S1 S1 S 0 1 N N N N N N 14.870 -3.666 5.944 -1.938 -0.628 -1.275 S1 AIX 24 AIX H8 H8 H 0 1 N N N N N N 16.265 2.114 6.116 3.536 3.348 -2.031 H8 AIX 25 AIX HN1 HN1 H 0 1 N N N N N N 17.700 -2.871 7.920 0.905 -0.555 -0.939 HN1 AIX 26 AIX HN3 HN3 H 0 1 N N N N N N 16.677 -5.566 4.783 -2.358 -0.116 2.169 HN3 AIX 27 AIX H4 H4 H 0 1 N N N N N N 17.302 -1.000 9.182 3.209 -1.261 -1.539 H4 AIX 28 AIX H1 H1 H 0 1 N N N N N N 14.060 -3.594 3.309 -2.953 2.082 -1.142 H1 AIX 29 AIX H1A H1A H 0 1 N N N N N N 15.362 -2.737 2.416 -3.712 1.401 -2.601 H1A AIX 30 AIX H1B H1B H 0 1 N N N N N N 15.587 -4.451 2.906 -4.719 1.870 -1.211 H1B AIX 31 AIX H7 H7 H 0 1 N N N N N N 17.376 0.558 7.749 2.897 0.977 -2.219 H7 AIX 32 AIX H9 H9 H 0 1 N N N N N N 13.816 1.943 5.768 4.847 4.119 -0.094 H9 AIX 33 AIX H10 H10 H 0 1 N N N N N N 12.440 0.389 7.109 5.523 2.519 1.651 H10 AIX 34 AIX H11 H11 H 0 1 N N N N N N 13.541 -1.152 8.752 4.883 0.149 1.463 H11 AIX 35 AIX H12 H12 H 0 1 N N N N N N 17.693 -2.903 5.417 -4.551 -0.484 0.935 H12 AIX 36 AIX H13 H13 H 0 1 N N N N N N 15.360 -5.825 6.733 -0.941 0.778 0.473 H13 AIX 37 AIX H14 H14 H 0 1 N N N N N N 16.233 -5.326 8.674 0.118 -1.081 1.824 H14 AIX 38 AIX H15 H15 H 0 1 N N N N N N 18.372 -6.363 7.555 -1.474 -3.014 1.112 H15 AIX 39 AIX H16 H16 H 0 1 N N N N N N 15.800 -1.129 5.536 -5.675 -0.530 -1.191 H16 AIX 40 AIX H16A H16A H 0 0 N N N N N N 16.698 -1.178 3.981 -4.629 -0.901 -2.583 H16A AIX 41 AIX H16B H16B H 0 0 N N N N N N 14.902 -1.145 3.981 -4.537 -1.897 -1.110 H16B AIX 42 AIX HN2 HN2 H 0 1 N N N N N N 16.648 -1.030 11.240 5.369 -1.765 -0.669 HN2 AIX 43 AIX HN2A HN2A H 0 0 N N N N N N 15.318 -0.220 10.747 4.815 -1.683 0.897 HN2A AIX 44 AIX HO1 HO1 H 0 1 N N N N N N 18.686 -5.034 2.406 -5.082 3.022 1.306 HO1 AIX 45 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AIX C9 C8 DOUB Y N 1 AIX C8 C7 SING Y N 2 AIX C8 H8 SING N N 3 AIX C7 C5 DOUB Y N 4 AIX C11 C5 SING Y N 5 AIX C5 C4 SING N N 6 AIX C1 C6 SING N N 7 AIX C16 C6 SING N N 8 AIX C6 C12 SING N N 9 AIX C6 S1 SING N N 10 AIX C14 N1 SING N N 11 AIX N1 C3 SING N N 12 AIX N1 HN1 SING N N 13 AIX O2 C2 DOUB N N 14 AIX O1 C2 SING N N 15 AIX C2 C12 SING N N 16 AIX C12 N3 SING N N 17 AIX N3 C13 SING N N 18 AIX N3 HN3 SING N N 19 AIX C3 C4 SING N N 20 AIX C4 N2 SING N N 21 AIX C4 H4 SING N N 22 AIX C1 H1 SING N N 23 AIX C1 H1A SING N N 24 AIX C1 H1B SING N N 25 AIX C3 O3 DOUB N N 26 AIX C7 H7 SING N N 27 AIX C9 C10 SING Y N 28 AIX C9 H9 SING N N 29 AIX C10 C11 DOUB Y N 30 AIX C10 H10 SING N N 31 AIX C11 H11 SING N N 32 AIX C12 H12 SING N N 33 AIX S1 C13 SING N N 34 AIX C13 C14 SING N N 35 AIX C13 H13 SING N N 36 AIX C15 C14 SING N N 37 AIX C14 H14 SING N N 38 AIX O4 C15 DOUB N N 39 AIX C15 H15 SING N N 40 AIX C16 H16 SING N N 41 AIX C16 H16A SING N N 42 AIX C16 H16B SING N N 43 AIX N2 HN2 SING N N 44 AIX N2 HN2A SING N N 45 AIX O1 HO1 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor AIX SMILES ACDLabs 10.04 "O=C(NC(C=O)C1SC(C(N1)C(=O)O)(C)C)C(c2ccccc2)N" AIX SMILES_CANONICAL CACTVS 3.341 "CC1(C)S[C@@H](N[C@H]1C(O)=O)[C@H](NC(=O)[C@H](N)c2ccccc2)C=O" AIX SMILES CACTVS 3.341 "CC1(C)S[CH](N[CH]1C(O)=O)[CH](NC(=O)[CH](N)c2ccccc2)C=O" AIX SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC1([C@@H](N[C@H](S1)[C@@H](C=O)NC(=O)[C@@H](c2ccccc2)N)C(=O)O)C" AIX SMILES "OpenEye OEToolkits" 1.5.0 "CC1(C(NC(S1)C(C=O)NC(=O)C(c2ccccc2)N)C(=O)O)C" AIX InChI InChI 1.03 "InChI=1S/C16H21N3O4S/c1-16(2)12(15(22)23)19-14(24-16)10(8-20)18-13(21)11(17)9-6-4-3-5-7-9/h3-8,10-12,14,19H,17H2,1-2H3,(H,18,21)(H,22,23)/t10-,11-,12+,14-/m1/s1" AIX InChIKey InChI 1.03 WHAIWIUXAXKSOT-NRWUCQMLSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier AIX "SYSTEMATIC NAME" ACDLabs 10.04 "(2R,4S)-2-[(1R)-1-{[(2R)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid" AIX "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,4S)-2-[(1R)-1-[[(2R)-2-amino-2-phenyl-ethanoyl]amino]-2-oxo-ethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site AIX "Create component" 2009-07-02 PDBJ AIX "Modify aromatic_flag" 2011-06-04 RCSB AIX "Modify descriptor" 2011-06-04 RCSB AIX "Modify synonyms" 2020-06-05 PDBE AIX "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id AIX _pdbx_chem_comp_synonyms.name "AMPICILLIN (open form)" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id AIX _pdbx_chem_comp_pcm.modified_residue_id SER _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C15 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #