data_AML # _chem_comp.id AML _chem_comp.name AMYLAMINE _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C5 H13 N" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2001-07-05 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 87.163 _chem_comp.one_letter_code ? _chem_comp.three_letter_code AML _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1JIR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal AML C1 C1 C 0 1 N N N N N N 13.507 4.235 80.725 -0.243 0.020 3.168 C1 AML 1 AML C2 C2 C 0 1 N N N N N N 14.327 3.236 79.910 0.563 -0.019 1.869 C2 AML 2 AML C3 C3 C 0 1 N N N N N N 14.209 3.419 78.405 -0.392 0.009 0.674 C3 AML 3 AML C4 C4 C 0 1 N N N N N N 12.755 3.485 77.973 0.414 -0.030 -0.624 C4 AML 4 AML C5 C5 C 0 1 N N N N N N 12.622 3.545 76.464 -0.540 -0.001 -1.819 C5 AML 5 AML N1 N1 N 0 1 N N N N N N 11.197 3.669 76.088 0.234 -0.040 -3.067 N1 AML 6 AML HC11 1HC1 H 0 0 N N N N N N 13.593 4.100 81.828 0.436 -0.000 4.019 HC11 AML 7 AML HC12 2HC1 H 0 0 N N N N N N 13.765 5.280 80.436 -0.836 0.935 3.199 HC12 AML 8 AML HC13 3HC1 H 0 0 N N N N N N 12.437 4.211 80.410 -0.906 -0.843 3.211 HC13 AML 9 AML HC21 1HC2 H 0 0 N N N N N N 15.396 3.259 80.224 1.226 0.844 1.826 HC21 AML 10 AML HC22 2HC2 H 0 0 N N N N N N 14.068 2.190 80.198 1.155 -0.934 1.838 HC22 AML 11 AML HC31 1HC3 H 0 0 N N N N N N 14.781 4.308 78.053 -1.054 -0.854 0.717 HC31 AML 12 AML HC32 2HC3 H 0 0 N N N N N N 14.766 2.627 77.850 -0.984 0.924 0.705 HC32 AML 13 AML HC41 1HC4 H 0 0 N N N N N N 12.164 2.641 78.400 1.077 0.833 -0.668 HC41 AML 14 AML HC42 2HC4 H 0 0 N N N N N N 12.223 4.334 78.462 1.007 -0.945 -0.656 HC42 AML 15 AML HC51 1HC5 H 0 0 N N N N N N 13.243 4.357 76.021 -1.203 -0.865 -1.776 HC51 AML 16 AML HC52 2HC5 H 0 0 N N N N N N 13.112 2.676 75.966 -1.133 0.913 -1.788 HC52 AML 17 AML HN11 1HN1 H 0 0 N N N N N N 11.107 3.709 75.072 -0.432 -0.018 -3.823 HN11 AML 18 AML HN12 2HN1 H 0 0 N N N N N N 10.748 4.463 76.543 0.752 0.824 -3.113 HN12 AML 19 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AML C1 C2 SING N N 1 AML C1 HC11 SING N N 2 AML C1 HC12 SING N N 3 AML C1 HC13 SING N N 4 AML C2 C3 SING N N 5 AML C2 HC21 SING N N 6 AML C2 HC22 SING N N 7 AML C3 C4 SING N N 8 AML C3 HC31 SING N N 9 AML C3 HC32 SING N N 10 AML C4 C5 SING N N 11 AML C4 HC41 SING N N 12 AML C4 HC42 SING N N 13 AML C5 N1 SING N N 14 AML C5 HC51 SING N N 15 AML C5 HC52 SING N N 16 AML N1 HN11 SING N N 17 AML N1 HN12 SING N N 18 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor AML SMILES ACDLabs 10.04 NCCCCC AML SMILES_CANONICAL CACTVS 3.341 CCCCCN AML SMILES CACTVS 3.341 CCCCCN AML SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 CCCCCN AML SMILES "OpenEye OEToolkits" 1.5.0 CCCCCN AML InChI InChI 1.03 InChI=1S/C5H13N/c1-2-3-4-5-6/h2-6H2,1H3 AML InChIKey InChI 1.03 DPBLXKKOBLCELK-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier AML "SYSTEMATIC NAME" ACDLabs 10.04 pentan-1-amine AML "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 pentan-1-amine # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site AML "Create component" 2001-07-05 RCSB AML "Modify descriptor" 2011-06-04 RCSB AML "Modify PCM" 2024-09-27 PDBE # loop_ _pdbx_chem_comp_pcm.pcm_id _pdbx_chem_comp_pcm.comp_id _pdbx_chem_comp_pcm.modified_residue_id _pdbx_chem_comp_pcm.type _pdbx_chem_comp_pcm.category _pdbx_chem_comp_pcm.position _pdbx_chem_comp_pcm.polypeptide_position _pdbx_chem_comp_pcm.comp_id_linking_atom _pdbx_chem_comp_pcm.modified_residue_id_linking_atom _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 1 AML TPO None Crosslinker "Amino-acid backbone" C-terminal N1 C ? ? 2 AML 56A None Crosslinker "Amino-acid side chain" "Any position" C1 NE2 ? ? #