data_ANA # _chem_comp.id ANA _chem_comp.name "methyl 4-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosidonic acid" _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C14 H23 N O10" _chem_comp.mon_nstd_parent_comp_id SIA _chem_comp.pdbx_synonyms ;4-O-ACETYL-ALPHA-2-OMETHYL-5-N-ACETYL-ALPHA-D-NEURAMINIC ACID; methyl 4-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulosidonic acid; methyl 4-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-D-galacto-non-2-ulosidonic acid; methyl 4-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-galacto-non-2-ulosidonic acid ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 365.333 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ANA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1HGI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 ANA "4-O-ACETYL-ALPHA-2-OMETHYL-5-N-ACETYL-ALPHA-D-NEURAMINIC ACID" PDB ? 2 ANA "methyl 4-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulosidonic acid" PDB ? 3 ANA "methyl 4-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-D-galacto-non-2-ulosidonic acid" PDB ? 4 ANA "methyl 4-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-galacto-non-2-ulosidonic acid" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ANA C1 C1 C 0 1 N N N 24.933 90.573 1.478 2.257 -0.905 0.270 C1 ANA 1 ANA C2 C2 C 0 1 N N R 23.792 91.564 1.171 1.966 0.569 0.174 C2 ANA 2 ANA C3 C3 C 0 1 N N N 24.073 92.321 -0.133 1.566 0.917 -1.261 C3 ANA 3 ANA C4 C4 C 0 1 N N S 23.942 91.394 -1.336 0.332 0.095 -1.649 C4 ANA 4 ANA C5 C5 C 0 1 N N R 22.528 90.817 -1.339 -0.757 0.320 -0.595 C5 ANA 5 ANA C6 C6 C 0 1 N N R 22.298 90.044 -0.055 -0.182 0.017 0.789 C6 ANA 6 ANA C7 C7 C 0 1 N N R 20.916 89.421 0.113 -1.272 0.208 1.846 C7 ANA 7 ANA C8 C8 C 0 1 N N R 20.806 88.735 1.489 -0.698 -0.093 3.231 C8 ANA 8 ANA C9 C9 C 0 1 N N N 19.513 87.924 1.557 -1.789 0.096 4.288 C9 ANA 9 ANA C10 C10 C 0 1 N N N 21.370 89.776 -3.221 -2.894 -0.161 -1.663 C10 ANA 10 ANA C11 C11 C 0 1 N N N 21.433 88.787 -4.385 -4.058 -1.078 -1.938 C11 ANA 11 ANA C12 C12 C 0 1 N N N 23.461 91.977 3.526 3.421 0.991 1.898 C12 ANA 12 ANA CA4 CA4 C 0 1 N N N 25.564 92.453 -2.833 0.315 -0.067 -4.064 CA4 ANA 13 ANA CM4 CM4 C 0 1 N N N 25.849 93.944 -2.872 -0.182 0.375 -5.415 CM4 ANA 14 ANA N5 N5 N 0 1 N N N 22.461 89.925 -2.483 -1.889 -0.570 -0.863 N5 ANA 15 ANA O1A O1A O 0 1 N N N 26.094 90.955 1.525 1.951 -1.518 1.266 O1A ANA 16 ANA O1B O1B O 0 1 N N N 24.684 89.392 1.668 2.855 -1.539 -0.750 O1B ANA 17 ANA O2 O2 O 0 1 N N N 23.743 92.514 2.233 3.135 1.308 0.534 O2 ANA 18 ANA O4 O4 O 0 1 N N N 24.226 92.000 -2.629 -0.147 0.522 -2.951 O4 ANA 19 ANA O6 O6 O 0 1 N N N 22.516 90.913 1.061 0.902 0.901 1.065 O6 ANA 20 ANA O7 O7 O 0 1 N N N 19.917 90.386 -0.024 -1.741 1.557 1.808 O7 ANA 21 ANA O8 O8 O 0 1 N N N 21.925 87.888 1.732 -0.229 -1.443 3.269 O8 ANA 22 ANA O9 O9 O 0 1 N N N 19.525 87.087 2.683 -1.253 -0.185 5.582 O9 ANA 23 ANA O10 O10 O 0 1 N N N 20.339 90.382 -2.921 -2.862 0.943 -2.160 O10 ANA 24 ANA OA4 OA4 O 0 1 N N N 26.493 91.648 -2.872 1.132 -0.954 -3.982 OA4 ANA 25 ANA H32 H31 H 0 1 N N N 25.081 92.767 -0.073 1.332 1.980 -1.327 H32 ANA 26 ANA H31 H32 H 0 1 N N N 23.351 93.143 -0.228 2.389 0.681 -1.936 H31 ANA 27 ANA H4 H4 H 0 1 N N N 24.657 90.564 -1.233 0.594 -0.962 -1.684 H4 ANA 28 ANA H5 H5 H 0 1 N N N 21.805 91.650 -1.417 -1.092 1.356 -0.633 H5 ANA 29 ANA H6 H6 H 0 1 N N N 22.993 89.193 -0.052 0.173 -1.012 0.817 H6 ANA 30 ANA H7 H7 H 0 1 N N N 20.765 88.672 -0.673 -2.100 -0.470 1.640 H7 ANA 31 ANA H8 H8 H 0 1 N N N 20.766 89.507 2.283 0.129 0.584 3.437 H8 ANA 32 ANA H92 H91 H 0 1 N N N 19.396 87.309 0.655 -2.146 1.126 4.259 H92 ANA 33 ANA H91 H92 H 0 1 N N N 18.649 88.605 1.591 -2.617 -0.581 4.082 H91 ANA 34 ANA H111 H111 H 0 0 N N N 22.354 88.190 -4.350 -4.765 -0.578 -2.600 H111 ANA 35 ANA H113 H112 H 0 0 N N N 21.389 89.338 -5.333 -3.698 -1.990 -2.414 H113 ANA 36 ANA H112 H113 H 0 0 N N N 20.575 88.094 -4.352 -4.553 -1.329 -1.000 H112 ANA 37 ANA H121 H121 H 0 0 N N N 23.422 92.719 4.356 4.248 1.607 2.249 H121 ANA 38 ANA H122 H122 H 0 0 N N N 22.514 91.388 3.496 2.539 1.184 2.508 H122 ANA 39 ANA H123 H123 H 0 0 N N N 24.188 91.168 3.770 3.693 -0.061 1.976 H123 ANA 40 ANA HM41 HM41 H 0 0 N N N 26.894 94.297 -3.031 0.303 -0.213 -6.193 HM41 ANA 41 ANA HM42 HM42 H 0 0 N N N 25.193 94.412 -3.642 -1.261 0.230 -5.470 HM42 ANA 42 ANA HM43 HM43 H 0 0 N N N 25.454 94.406 -1.937 0.049 1.430 -5.560 HM43 ANA 43 ANA HN5 HN5 H 0 1 N N N 23.290 89.471 -2.745 -1.915 -1.455 -0.465 HN5 ANA 44 ANA HO1B HOB1 H 0 0 N N N 25.386 88.781 1.857 3.041 -2.486 -0.689 HO1B ANA 45 ANA HO7 HO7 H 0 1 N Y N 19.892 90.659 -0.954 -0.980 2.123 1.995 HO7 ANA 46 ANA HO8 HO8 H 0 1 N Y N 22.681 88.474 1.932 -0.991 -2.009 3.082 HO8 ANA 47 ANA HO9 HO9 H 0 1 N Y N 18.637 87.151 3.051 -1.970 -0.053 6.216 HO9 ANA 48 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ANA C1 C2 SING N N 1 ANA C1 O1A DOUB N N 2 ANA C1 O1B SING N N 3 ANA C2 C3 SING N N 4 ANA C2 O2 SING N N 5 ANA C2 O6 SING N N 6 ANA C3 C4 SING N N 7 ANA C3 H32 SING N N 8 ANA C3 H31 SING N N 9 ANA C4 C5 SING N N 10 ANA C4 O4 SING N N 11 ANA C4 H4 SING N N 12 ANA C5 C6 SING N N 13 ANA C5 N5 SING N N 14 ANA C5 H5 SING N N 15 ANA C6 C7 SING N N 16 ANA C6 O6 SING N N 17 ANA C6 H6 SING N N 18 ANA C7 C8 SING N N 19 ANA C7 O7 SING N N 20 ANA C7 H7 SING N N 21 ANA C8 C9 SING N N 22 ANA C8 O8 SING N N 23 ANA C8 H8 SING N N 24 ANA C9 O9 SING N N 25 ANA C9 H92 SING N N 26 ANA C9 H91 SING N N 27 ANA C10 C11 SING N N 28 ANA C10 N5 SING N N 29 ANA C10 O10 DOUB N N 30 ANA C11 H111 SING N N 31 ANA C11 H113 SING N N 32 ANA C11 H112 SING N N 33 ANA C12 O2 SING N N 34 ANA C12 H121 SING N N 35 ANA C12 H122 SING N N 36 ANA C12 H123 SING N N 37 ANA CA4 CM4 SING N N 38 ANA CA4 O4 SING N N 39 ANA CA4 OA4 DOUB N N 40 ANA CM4 HM41 SING N N 41 ANA CM4 HM42 SING N N 42 ANA CM4 HM43 SING N N 43 ANA N5 HN5 SING N N 44 ANA O1B HO1B SING N N 45 ANA O7 HO7 SING N N 46 ANA O8 HO8 SING N N 47 ANA O9 HO9 SING N N 48 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ANA SMILES ACDLabs 10.04 "O=C(O)C1(OC)OC(C(O)C(O)CO)C(NC(=O)C)C(OC(=O)C)C1" ANA SMILES_CANONICAL CACTVS 3.341 "CO[C@@]1(C[C@H](OC(C)=O)[C@@H](NC(C)=O)[C@@H](O1)[C@H](O)[C@H](O)CO)C(O)=O" ANA SMILES CACTVS 3.341 "CO[C]1(C[CH](OC(C)=O)[CH](NC(C)=O)[CH](O1)[CH](O)[CH](O)CO)C(O)=O" ANA SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(=O)N[C@@H]1[C@H](C[C@@](O[C@H]1[C@@H]([C@@H](CO)O)O)(C(=O)O)OC)OC(=O)C" ANA SMILES "OpenEye OEToolkits" 1.5.0 "CC(=O)NC1C(CC(OC1C(C(CO)O)O)(C(=O)O)OC)OC(=O)C" ANA InChI InChI 1.03 "InChI=1S/C14H23NO10/c1-6(17)15-10-9(24-7(2)18)4-14(23-3,13(21)22)25-12(10)11(20)8(19)5-16/h8-12,16,19-20H,4-5H2,1-3H3,(H,15,17)(H,21,22)/t8-,9+,10-,11-,12-,14-/m1/s1" ANA InChIKey InChI 1.03 LWHOUUJWFGBXPR-SVALUAMDSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ANA "SYSTEMATIC NAME" ACDLabs 10.04 "methyl 4-O-acetyl-5-(acetylamino)-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosidonic acid" ANA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,4S,5R,6R)-5-acetamido-4-acetyloxy-2-methoxy-6-[(1R,2R)-1,2,3-trihydroxypropyl]oxane-2-carboxylic acid" ANA "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 "4-O-acetyl-2-O-methyl-5-N-acetyl-a-D-neuraminic acid" # _pdbx_chem_comp_related.comp_id ANA _pdbx_chem_comp_related.related_comp_id SIA _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 ANA C1 SIA C1 "Carbohydrate core" 2 ANA C10 SIA C10 "Carbohydrate core" 3 ANA C11 SIA C11 "Carbohydrate core" 4 ANA C2 SIA C2 "Carbohydrate core" 5 ANA C3 SIA C3 "Carbohydrate core" 6 ANA C4 SIA C4 "Carbohydrate core" 7 ANA C5 SIA C5 "Carbohydrate core" 8 ANA C6 SIA C6 "Carbohydrate core" 9 ANA C7 SIA C7 "Carbohydrate core" 10 ANA C8 SIA C8 "Carbohydrate core" 11 ANA C9 SIA C9 "Carbohydrate core" 12 ANA N5 SIA N5 "Carbohydrate core" 13 ANA O10 SIA O10 "Carbohydrate core" 14 ANA O1A SIA O1A "Carbohydrate core" 15 ANA O1B SIA O1B "Carbohydrate core" 16 ANA O2 SIA O2 "Carbohydrate core" 17 ANA O4 SIA O4 "Carbohydrate core" 18 ANA O6 SIA O6 "Carbohydrate core" 19 ANA O7 SIA O7 "Carbohydrate core" 20 ANA O8 SIA O8 "Carbohydrate core" 21 ANA O9 SIA O9 "Carbohydrate core" 22 ANA H111 SIA H111 "Carbohydrate core" 23 ANA H113 SIA H113 "Carbohydrate core" 24 ANA H112 SIA H112 "Carbohydrate core" 25 ANA H32 SIA H32 "Carbohydrate core" 26 ANA H31 SIA H31 "Carbohydrate core" 27 ANA H4 SIA H4 "Carbohydrate core" 28 ANA H5 SIA H5 "Carbohydrate core" 29 ANA H6 SIA H6 "Carbohydrate core" 30 ANA H7 SIA H7 "Carbohydrate core" 31 ANA H8 SIA H8 "Carbohydrate core" 32 ANA H92 SIA H92 "Carbohydrate core" 33 ANA H91 SIA H91 "Carbohydrate core" 34 ANA HN5 SIA HN5 "Carbohydrate core" 35 ANA HO7 SIA HO7 "Carbohydrate core" 36 ANA HO8 SIA HO8 "Carbohydrate core" 37 ANA HO9 SIA HO9 "Carbohydrate core" 38 ANA HO1B SIA HO1B "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support ANA "CARBOHYDRATE ISOMER" D PDB ? ANA "CARBOHYDRATE RING" pyranose PDB ? ANA "CARBOHYDRATE ANOMER" alpha PDB ? ANA "CARBOHYDRATE PRIMARY CARBONYL GROUP" ketose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ANA "Create component" 1999-07-08 RCSB ANA "Modify descriptor" 2011-06-04 RCSB ANA "Other modification" 2020-07-03 RCSB ANA "Modify parent residue" 2020-07-17 RCSB ANA "Modify name" 2020-07-17 RCSB ANA "Modify synonyms" 2020-07-17 RCSB ANA "Modify internal type" 2020-07-17 RCSB ANA "Modify linking type" 2020-07-17 RCSB ANA "Modify atom id" 2020-07-17 RCSB ANA "Modify component atom id" 2020-07-17 RCSB ANA "Modify leaving atom flag" 2020-07-17 RCSB ##