data_ARO # _chem_comp.id ARO _chem_comp.name "C-GAMMA-HYDROXY ARGININE" _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H15 N4 O3" _chem_comp.mon_nstd_parent_comp_id ARG _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2000-09-05 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 191.208 _chem_comp.one_letter_code R _chem_comp.three_letter_code ARO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 1FFV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ARO N N N 0 1 N N N Y Y N 38.618 70.327 46.292 2.405 1.680 -0.081 N ARO 1 ARO CA CA C 0 1 N N S Y N N 39.332 71.543 45.893 2.289 0.309 0.432 CA ARO 2 ARO C C C 0 1 N N N Y N Y 39.150 71.921 44.415 3.524 -0.472 0.062 C ARO 3 ARO O O O 0 1 N N N Y N Y 40.115 72.327 43.760 3.839 -1.589 0.736 O ARO 4 ARO CB CB C 0 1 N N N N N N 40.836 71.399 46.186 1.058 -0.363 -0.180 CB ARO 5 ARO CG CG C 0 1 N N R N N N 41.140 71.180 47.664 -0.207 0.336 0.322 CG ARO 6 ARO OH OH O 0 1 N N N N N N 40.737 70.056 48.180 -0.249 1.670 -0.188 OH ARO 7 ARO CD CD C 0 1 N N N N N N 42.540 71.653 48.053 -1.439 -0.433 -0.159 CD ARO 8 ARO NE NE N 0 1 N N N N N N 43.134 70.966 49.197 -2.650 0.236 0.322 NE ARO 9 ARO CZ CZ C 0 1 N N N N N N 44.117 71.437 49.964 -3.888 -0.277 0.013 CZ ARO 10 ARO NH1 NH1 N 0 1 N N N N N N 44.652 72.633 49.743 -3.986 -1.388 -0.728 NH1 ARO 11 ARO NH2 NH2 N 1 1 N N N N N N 44.607 70.670 50.932 -4.995 0.334 0.452 NH2 ARO 12 ARO OXT OXT O 0 1 N Y N Y N Y 37.917 71.863 43.910 4.230 -0.093 -0.842 OXT ARO 13 ARO H H H 0 1 N N N Y Y N 38.738 70.076 47.273 2.338 1.620 -1.086 H ARO 14 ARO H2 HN2 H 0 1 N Y N Y Y N 38.876 69.546 45.688 1.586 2.178 0.234 H2 ARO 15 ARO HA HA H 0 1 N N N Y N N 38.881 72.364 46.498 2.187 0.334 1.517 HA ARO 16 ARO HB2 1HB H 0 1 N N N N N N 41.286 70.590 45.563 1.107 -0.289 -1.267 HB2 ARO 17 ARO HB3 2HB H 0 1 N N N N N N 41.403 72.272 45.789 1.034 -1.413 0.112 HB3 ARO 18 ARO HG 1HG H 0 1 N N N N N N 40.452 71.874 48.201 -0.198 0.363 1.412 HG ARO 19 ARO HH HOH H 0 1 N N N N N N 40.926 69.919 49.100 -0.255 1.600 -1.153 HH ARO 20 ARO HD2 1HD H 0 1 N N N N N N 43.222 71.593 47.173 -1.448 -0.461 -1.249 HD2 ARO 21 ARO HD3 2HD H 0 1 N N N N N N 42.538 72.754 48.225 -1.407 -1.451 0.230 HD3 ARO 22 ARO HE HE H 0 1 N N N N N N 43.442 70.054 48.858 -2.579 1.040 0.859 HE ARO 23 ARO HH11 1HH1 H 0 0 N N N N N N 45.404 72.993 50.330 -3.184 -1.831 -1.047 HH11 ARO 24 ARO HH12 2HH1 H 0 0 N N N N N N 43.897 73.319 49.740 -4.859 -1.750 -0.947 HH12 ARO 25 ARO HH21 1HH2 H 0 0 N N N N N N 44.196 69.751 51.101 -5.868 -0.028 0.234 HH21 ARO 26 ARO HH22 2HH2 H 0 0 N N N N N N 45.359 71.030 51.519 -4.924 1.139 0.989 HH22 ARO 27 ARO HXT HXT H 0 1 N Y N Y N Y 37.804 72.096 42.996 ? ? ? HXT ARO 28 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ARO N CA SING N N 1 ARO N H SING N N 2 ARO N H2 SING N N 3 ARO CA C SING N N 4 ARO CA CB SING N N 5 ARO CA HA SING N N 6 ARO C O DOUB N N 7 ARO C OXT SING N N 8 ARO CB CG SING N N 9 ARO CB HB2 SING N N 10 ARO CB HB3 SING N N 11 ARO CG OH SING N N 12 ARO CG CD SING N N 13 ARO CG HG SING N N 14 ARO OH HH SING N N 15 ARO CD NE SING N N 16 ARO CD HD2 SING N N 17 ARO CD HD3 SING N N 18 ARO NE CZ SING N N 19 ARO NE HE SING N N 20 ARO CZ NH1 SING N N 21 ARO CZ NH2 DOUB N N 22 ARO NH1 HH11 SING N N 23 ARO NH1 HH12 SING N N 24 ARO NH2 HH21 SING N N 25 ARO NH2 HH22 SING N N 26 ARO OXT HXT SING N N 27 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ARO SMILES ACDLabs 10.04 "O=C(O)C(N)CC(O)CNC(\N)=[NH2+]" ARO SMILES_CANONICAL CACTVS 3.341 "N[C@@H](C[C@@H](O)CNC(N)=[NH2+])C(O)=O" ARO SMILES CACTVS 3.341 "N[CH](C[CH](O)CNC(N)=[NH2+])C(O)=O" ARO SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@H](CNC(=[NH2+])N)O)[C@@H](C(=O)O)N" ARO SMILES "OpenEye OEToolkits" 1.5.0 "C(C(CNC(=[NH2+])N)O)C(C(=O)O)N" ARO InChI InChI 1.03 "InChI=1S/C6H14N4O3/c7-4(5(12)13)1-3(11)2-10-6(8)9/h3-4,11H,1-2,7H2,(H,12,13)(H4,8,9,10)/p+1/t3-,4+/m1/s1" ARO InChIKey InChI 1.03 OPCBKDJCJYBGTQ-DMTCNVIQSA-O # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ARO "SYSTEMATIC NAME" ACDLabs 10.04 "amino{[(2R,4S)-4-amino-2,5-dihydroxy-5-oxopentyl]amino}methaniminium" ARO "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[amino-[[(2R,4S)-4-amino-2,5-dihydroxy-5-oxo-pentyl]amino]methylidene]azanium" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ARO "Create component" 2000-09-05 RCSB ARO "Modify descriptor" 2011-06-04 RCSB ARO "Modify backbone" 2023-11-03 PDBE ARO "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id ARO _pdbx_chem_comp_pcm.modified_residue_id ARG _pdbx_chem_comp_pcm.type Hydroxylation _pdbx_chem_comp_pcm.category "Named protein modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession PTM-0042 _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession PTM-0498 #