data_ASG # _chem_comp.id ASG _chem_comp.name 2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose _chem_comp.type "D-saccharide, beta linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C8 H15 N O9 S" _chem_comp.mon_nstd_parent_comp_id NGA _chem_comp.pdbx_synonyms ;2-DEOXY-2-ACETAMIDO-BETA-D-GALACTOSE-4-SULFATE; N-acetyl-4-O-sulfo-beta-D-galactosamine; 2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactose; 2-acetamido-2-deoxy-4-O-sulfo-D-galactose; 2-acetamido-2-deoxy-4-O-sulfo-galactose ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces NGL _chem_comp.formula_weight 301.271 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ASG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1C4S _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 ASG 2-DEOXY-2-ACETAMIDO-BETA-D-GALACTOSE-4-SULFATE PDB ? 2 ASG N-acetyl-4-O-sulfo-beta-D-galactosamine PDB ? 3 ASG 2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactose PDB ? 4 ASG 2-acetamido-2-deoxy-4-O-sulfo-D-galactose PDB ? 5 ASG 2-acetamido-2-deoxy-4-O-sulfo-galactose PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ASG C1 C1 C 0 1 N N R 8.940 4.592 3.112 1.469 -0.128 1.544 C1 ASG 1 ASG C2 C2 C 0 1 N N R 8.660 3.544 4.180 -0.059 -0.171 1.561 C2 ASG 2 ASG C3 C3 C 0 1 N N R 9.209 3.992 5.525 -0.547 -1.128 0.467 C3 ASG 3 ASG C4 C4 C 0 1 N N R 10.680 4.365 5.398 0.081 -0.707 -0.866 C4 ASG 4 ASG C5 C5 C 0 1 N N R 10.875 5.363 4.262 1.600 -0.624 -0.700 C5 ASG 5 ASG C6 C6 C 0 1 N N N 12.332 5.686 4.010 2.236 -0.235 -2.036 C6 ASG 6 ASG C7 C7 C 0 1 N N N 6.729 2.016 4.112 -0.765 0.237 3.857 C7 ASG 7 ASG C8 C8 C 0 1 N N N 5.226 1.919 4.217 -1.240 -0.250 5.202 C8 ASG 8 ASG O1 O1 O 0 1 N Y N 8.543 4.083 1.883 1.932 0.739 2.580 O1 ASG 9 ASG N2 N N 0 1 N N N 7.203 3.303 4.262 -0.522 -0.645 2.868 N2 ASG 10 ASG O3 O3 O 0 1 N N N 9.059 2.940 6.480 -1.971 -1.066 0.367 O3 ASG 11 ASG O4 O4 O 0 1 N N N 11.466 3.204 5.137 -0.428 0.570 -1.253 O4 ASG 12 ASG O5 O5 O 0 1 N N N 10.348 4.829 3.039 1.925 0.357 0.282 O5 ASG 13 ASG O6 O6 O 0 1 N N N 12.791 5.138 2.775 3.655 -0.163 -1.885 O6 ASG 14 ASG O7 O7 O 0 1 N N N 7.450 1.051 3.917 -0.600 1.423 3.666 O7 ASG 15 ASG OSA OSA O 0 1 N N N 11.471 2.970 7.618 -2.379 -0.418 -2.364 OSA ASG 16 ASG OSB OSB O 0 1 N N N 13.135 1.828 6.375 -1.535 1.677 -3.002 OSB ASG 17 ASG OSC OSC O 0 1 N N N 10.889 1.084 6.313 -0.250 -0.467 -3.351 OSC ASG 18 ASG S S S 0 1 N N N 11.747 2.250 6.389 -1.107 0.383 -2.602 S ASG 19 ASG H1 H1 H 0 1 N N N 8.395 5.532 3.360 1.862 -1.131 1.709 H1 ASG 20 ASG H2 H2 H 0 1 N N N 9.170 2.592 3.903 -0.455 0.827 1.375 H2 ASG 21 ASG H3 H3 H 0 1 N N N 8.639 4.887 5.866 -0.241 -2.145 0.711 H3 ASG 22 ASG H4 H4 H 0 1 N N N 11.006 4.825 6.359 -0.161 -1.444 -1.632 H4 ASG 23 ASG H5 H5 H 0 1 N N N 10.341 6.291 4.574 1.984 -1.594 -0.384 H5 ASG 24 ASG H61 H6A H 0 1 N N N 12.518 6.784 4.061 1.988 -0.984 -2.788 H61 ASG 25 ASG H62 H6B H 0 1 N N N 12.973 5.359 4.861 1.854 0.735 -2.351 H62 ASG 26 ASG H81 H8A H 0 1 N N N 4.842 0.878 4.095 -1.381 0.600 5.868 H81 ASG 27 ASG H82 H8B H 0 1 N N N 4.865 2.365 5.173 -2.186 -0.779 5.083 H82 ASG 28 ASG H83 H8C H 0 1 N N N 4.732 2.610 3.494 -0.497 -0.925 5.627 H83 ASG 29 ASG HO1 HO1 H 0 1 N Y N 8.717 4.737 1.216 2.898 0.739 2.535 HO1 ASG 30 ASG HN2 HN H 0 1 N N N 6.513 4.036 4.424 -0.653 -1.593 3.021 HN2 ASG 31 ASG HO3 HO3 H 0 1 N Y N 9.402 3.220 7.320 -2.323 -1.338 1.225 HO3 ASG 32 ASG HO6 HO6 H 0 1 N Y N 13.705 5.340 2.616 4.016 0.083 -2.747 HO6 ASG 33 ASG HOA HOA H 0 1 N N N 11.638 2.403 8.361 -2.803 -0.531 -3.226 HOA ASG 34 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ASG C1 C2 SING N N 1 ASG C1 O1 SING N N 2 ASG C1 O5 SING N N 3 ASG C1 H1 SING N N 4 ASG C2 C3 SING N N 5 ASG C2 N2 SING N N 6 ASG C2 H2 SING N N 7 ASG C3 C4 SING N N 8 ASG C3 O3 SING N N 9 ASG C3 H3 SING N N 10 ASG C4 C5 SING N N 11 ASG C4 O4 SING N N 12 ASG C4 H4 SING N N 13 ASG C5 C6 SING N N 14 ASG C5 O5 SING N N 15 ASG C5 H5 SING N N 16 ASG C6 O6 SING N N 17 ASG C6 H61 SING N N 18 ASG C6 H62 SING N N 19 ASG C7 C8 SING N N 20 ASG C7 N2 SING N N 21 ASG C7 O7 DOUB N N 22 ASG C8 H81 SING N N 23 ASG C8 H82 SING N N 24 ASG C8 H83 SING N N 25 ASG O1 HO1 SING N N 26 ASG N2 HN2 SING N N 27 ASG O3 HO3 SING N N 28 ASG O4 S SING N N 29 ASG O6 HO6 SING N N 30 ASG OSA S SING N N 31 ASG OSA HOA SING N N 32 ASG OSB S DOUB N N 33 ASG OSC S DOUB N N 34 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ASG SMILES ACDLabs 10.04 "O=S(=O)(O)OC1C(OC(O)C(NC(=O)C)C1O)CO" ASG SMILES_CANONICAL CACTVS 3.341 "CC(=O)N[C@H]1[C@H](O)O[C@H](CO)[C@H](O[S](O)(=O)=O)[C@@H]1O" ASG SMILES CACTVS 3.341 "CC(=O)N[CH]1[CH](O)O[CH](CO)[CH](O[S](O)(=O)=O)[CH]1O" ASG SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(=O)N[C@@H]1[C@H]([C@H]([C@H](O[C@H]1O)CO)OS(=O)(=O)O)O" ASG SMILES "OpenEye OEToolkits" 1.5.0 "CC(=O)NC1C(C(C(OC1O)CO)OS(=O)(=O)O)O" ASG InChI InChI 1.03 "InChI=1S/C8H15NO9S/c1-3(11)9-5-6(12)7(18-19(14,15)16)4(2-10)17-8(5)13/h4-8,10,12-13H,2H2,1H3,(H,9,11)(H,14,15,16)/t4-,5-,6-,7+,8-/m1/s1" ASG InChIKey InChI 1.03 WHCJUIFHMJFEFZ-UIAUGNHASA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ASG "SYSTEMATIC NAME" ACDLabs 10.04 "2-(acetylamino)-2-deoxy-4-O-sulfo-beta-D-galactopyranose" ASG "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3R,4R,5R,6R)-5-acetamido-4,6-dihydroxy-2-(hydroxymethyl)oxan-3-yl] hydrogen sulfate" ASG "CONDENSED IUPAC CARBOHYDRATE SYMBOL" GMML 1.0 DGalpNAc[4S]b ASG "COMMON NAME" GMML 1.0 N-acetyl-4-sulfo-b-D-galactopyranose ASG "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 b-D-GalpNAc4SO3 # _pdbx_chem_comp_related.comp_id ASG _pdbx_chem_comp_related.related_comp_id NGA _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 ASG C1 NGA C1 "Carbohydrate core" 2 ASG C2 NGA C2 "Carbohydrate core" 3 ASG C3 NGA C3 "Carbohydrate core" 4 ASG C4 NGA C4 "Carbohydrate core" 5 ASG C5 NGA C5 "Carbohydrate core" 6 ASG C6 NGA C6 "Carbohydrate core" 7 ASG C7 NGA C7 "Carbohydrate core" 8 ASG C8 NGA C8 "Carbohydrate core" 9 ASG N2 NGA N2 "Carbohydrate core" 10 ASG O1 NGA O1 "Carbohydrate core" 11 ASG O3 NGA O3 "Carbohydrate core" 12 ASG O4 NGA O4 "Carbohydrate core" 13 ASG O5 NGA O5 "Carbohydrate core" 14 ASG O6 NGA O6 "Carbohydrate core" 15 ASG O7 NGA O7 "Carbohydrate core" 16 ASG H1 NGA H1 "Carbohydrate core" 17 ASG H2 NGA H2 "Carbohydrate core" 18 ASG H3 NGA H3 "Carbohydrate core" 19 ASG H4 NGA H4 "Carbohydrate core" 20 ASG H5 NGA H5 "Carbohydrate core" 21 ASG H61 NGA H61 "Carbohydrate core" 22 ASG H62 NGA H62 "Carbohydrate core" 23 ASG H81 NGA H81 "Carbohydrate core" 24 ASG H82 NGA H82 "Carbohydrate core" 25 ASG H83 NGA H83 "Carbohydrate core" 26 ASG HN2 NGA HN2 "Carbohydrate core" 27 ASG HO1 NGA HO1 "Carbohydrate core" 28 ASG HO3 NGA HO3 "Carbohydrate core" 29 ASG HO6 NGA HO6 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support ASG "CARBOHYDRATE ISOMER" D PDB ? ASG "CARBOHYDRATE RING" pyranose PDB ? ASG "CARBOHYDRATE ANOMER" beta PDB ? ASG "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ASG "Create component" 1999-07-08 EBI ASG "Modify descriptor" 2011-06-04 RCSB ASG "Other modification" 2020-07-03 RCSB ASG "Modify parent residue" 2020-07-17 RCSB ASG "Modify name" 2020-07-17 RCSB ASG "Modify synonyms" 2020-07-17 RCSB ASG "Modify linking type" 2020-07-17 RCSB ASG "Modify atom id" 2020-07-17 RCSB ASG "Modify component atom id" 2020-07-17 RCSB ASG "Modify leaving atom flag" 2020-07-17 RCSB ##