data_AXV # _chem_comp.id AXV _chem_comp.name "1~{H}-benzimidazol-2-ylcyanamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H6 N4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-07-28 _chem_comp.pdbx_modified_date 2018-08-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 158.160 _chem_comp.one_letter_code ? _chem_comp.three_letter_code AXV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5Q1W _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal AXV N1 N1 N 0 1 Y N N 16.525 2.676 26.120 0.617 0.726 0.004 N1 AXV 1 AXV N3 N2 N 0 1 N N N 16.249 2.521 28.502 2.478 -0.849 -0.000 N3 AXV 2 AXV C4 C1 C 0 1 Y N N 17.640 0.798 25.795 -1.038 -0.769 -0.001 C4 AXV 3 AXV C5 C2 C 0 1 Y N N 17.109 1.910 25.131 -0.763 0.609 0.002 C5 AXV 4 AXV C6 C3 C 0 1 Y N N 17.209 2.074 23.761 -1.806 1.523 0.002 C6 AXV 5 AXV C7 C4 C 0 1 Y N N 16.718 2.023 27.287 1.130 -0.539 0.002 C7 AXV 6 AXV C8 C5 C 0 1 N N N 16.300 1.779 29.686 3.401 0.143 -0.002 C8 AXV 7 AXV C1 C6 C 0 1 Y N N 17.872 1.086 23.067 -3.111 1.075 -0.001 C1 AXV 8 AXV C2 C7 C 0 1 Y N N 18.410 -0.030 23.715 -3.388 -0.284 -0.004 C2 AXV 9 AXV C3 C8 C 0 1 Y N N 18.306 -0.191 25.077 -2.365 -1.205 -0.003 C3 AXV 10 AXV N2 N3 N 0 1 Y N N 17.385 0.891 27.162 0.157 -1.415 0.005 N2 AXV 11 AXV N4 N4 N 0 1 N N N 16.335 1.175 30.669 4.175 0.974 -0.004 N4 AXV 12 AXV H1 H1 H 0 1 N N N 16.050 3.547 25.996 1.124 1.553 0.002 H1 AXV 13 AXV H2 H2 H 0 1 N N N 15.862 3.443 28.528 2.762 -1.776 -0.001 H2 AXV 14 AXV H3 H3 H 0 1 N N N 16.788 2.934 23.261 -1.597 2.582 0.004 H3 AXV 15 AXV H4 H4 H 0 1 N N N 17.979 1.176 21.996 -3.922 1.788 -0.001 H4 AXV 16 AXV H5 H5 H 0 1 N N N 18.919 -0.783 23.132 -4.414 -0.622 -0.005 H5 AXV 17 AXV H6 H6 H 0 1 N N N 18.726 -1.054 25.572 -2.588 -2.262 -0.005 H6 AXV 18 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AXV C1 C2 DOUB Y N 1 AXV C1 C6 SING Y N 2 AXV C2 C3 SING Y N 3 AXV C6 C5 DOUB Y N 4 AXV C3 C4 DOUB Y N 5 AXV C5 C4 SING Y N 6 AXV C5 N1 SING Y N 7 AXV C4 N2 SING Y N 8 AXV N1 C7 SING Y N 9 AXV N2 C7 DOUB Y N 10 AXV C7 N3 SING N N 11 AXV N3 C8 SING N N 12 AXV C8 N4 TRIP N N 13 AXV N1 H1 SING N N 14 AXV N3 H2 SING N N 15 AXV C6 H3 SING N N 16 AXV C1 H4 SING N N 17 AXV C2 H5 SING N N 18 AXV C3 H6 SING N N 19 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor AXV InChI InChI 1.03 "InChI=1S/C8H6N4/c9-5-10-8-11-6-3-1-2-4-7(6)12-8/h1-4H,(H2,10,11,12)" AXV InChIKey InChI 1.03 NYLIXUBOFQIMGV-UHFFFAOYSA-N AXV SMILES_CANONICAL CACTVS 3.385 "N#CNc1[nH]c2ccccc2n1" AXV SMILES CACTVS 3.385 "N#CNc1[nH]c2ccccc2n1" AXV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc2c(c1)[nH]c(n2)NC#N" AXV SMILES "OpenEye OEToolkits" 2.0.6 "c1ccc2c(c1)[nH]c(n2)NC#N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier AXV "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "1~{H}-benzimidazol-2-ylcyanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site AXV "Create component" 2017-07-28 RCSB AXV "Initial release" 2018-08-08 RCSB #