data_AY3
#
_chem_comp.id AY3
_chem_comp.name "4-[(~{E})-(2-oxidanylidene-1~{H}-indol-3-ylidene)methyl]benzoic acid"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C16 H11 N O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2021-12-06
_chem_comp.pdbx_modified_date 2022-12-16
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 265.263
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code AY3
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7QFM
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
AY3 C15 C1 C 0 1 Y N N -119.435 203.299 -3.084 1.563 1.807 -0.861 C15 AY3 1
AY3 C14 C2 C 0 1 Y N N -119.272 202.058 -3.666 2.824 1.269 -0.835 C14 AY3 2
AY3 C13 C3 C 0 1 N N N -118.371 199.741 -3.679 4.482 -0.350 0.075 C13 AY3 3
AY3 C12 C4 C 0 1 Y N N -118.498 201.083 -3.054 3.123 0.229 0.049 C12 AY3 4
AY3 C11 C5 C 0 1 Y N N -117.875 201.387 -1.850 2.139 -0.264 0.910 C11 AY3 5
AY3 C10 C6 C 0 1 Y N N -118.030 202.635 -1.275 0.877 0.273 0.888 C10 AY3 6
AY3 O2 O1 O 0 1 N N N -118.923 199.495 -4.753 5.339 0.078 -0.673 O2 AY3 7
AY3 C9 C7 C 0 1 Y N N -118.822 203.613 -1.876 0.575 1.314 0.001 C9 AY3 8
AY3 O1 O2 O 0 1 N N N -117.652 198.876 -3.010 4.772 -1.352 0.927 O1 AY3 9
AY3 C8 C8 C 0 1 N N N -119.065 204.933 -1.291 -0.775 1.893 -0.020 C8 AY3 10
AY3 C1 C9 C 0 1 N N N -119.453 205.239 -0.044 -1.866 1.079 0.017 C1 AY3 11
AY3 O O3 O 0 1 N N N -119.486 207.672 -0.304 -3.686 2.606 0.378 O AY3 12
AY3 C C10 C 0 1 N N N -119.631 206.668 0.388 -3.276 1.472 0.214 C AY3 13
AY3 C7 C11 C 0 1 Y N N -119.805 203.072 1.389 -0.912 -1.350 -0.356 C7 AY3 14
AY3 C2 C12 C 0 1 Y N N -119.762 204.441 1.126 -1.898 -0.393 -0.140 C2 AY3 15
AY3 N N1 N 0 1 N N N -119.999 206.639 1.688 -4.024 0.356 0.182 N AY3 16
AY3 C6 C13 C 0 1 Y N N -120.162 202.626 2.653 -1.261 -2.682 -0.460 C6 AY3 17
AY3 C5 C14 C 0 1 Y N N -120.475 203.526 3.663 -2.588 -3.062 -0.349 C5 AY3 18
AY3 C4 C15 C 0 1 Y N N -120.442 204.893 3.430 -3.574 -2.120 -0.134 C4 AY3 19
AY3 C3 C16 C 0 1 Y N N -120.087 205.338 2.165 -3.242 -0.774 -0.027 C3 AY3 20
AY3 H1 H1 H 0 1 N N N -120.049 204.039 -3.575 1.333 2.613 -1.541 H1 AY3 21
AY3 H2 H2 H 0 1 N N N -119.753 201.844 -4.609 3.586 1.648 -1.500 H2 AY3 22
AY3 H3 H3 H 0 1 N N N -117.265 200.643 -1.359 2.372 -1.067 1.593 H3 AY3 23
AY3 H4 H4 H 0 1 N N N -117.529 202.856 -0.344 0.116 -0.109 1.553 H4 AY3 24
AY3 H5 H5 H 0 1 N N N -117.630 198.051 -3.480 5.674 -1.698 0.907 H5 AY3 25
AY3 H6 H6 H 0 1 N N N -118.911 205.773 -1.952 -0.902 2.964 -0.065 H6 AY3 26
AY3 H7 H7 H 0 1 N N N -119.561 202.362 0.612 0.122 -1.052 -0.443 H7 AY3 27
AY3 H8 H8 H 0 1 N N N -120.185 207.453 2.238 -4.988 0.342 0.287 H8 AY3 28
AY3 H9 H9 H 0 1 N N N -120.197 201.565 2.854 -0.499 -3.428 -0.628 H9 AY3 29
AY3 H10 H10 H 0 1 N N N -120.747 203.158 4.641 -2.854 -4.105 -0.431 H10 AY3 30
AY3 H11 H11 H 0 1 N N N -120.687 205.594 4.214 -4.606 -2.429 -0.050 H11 AY3 31
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
AY3 O2 C13 DOUB N N 1
AY3 C13 C12 SING N N 2
AY3 C13 O1 SING N N 3
AY3 C14 C15 DOUB Y N 4
AY3 C14 C12 SING Y N 5
AY3 C15 C9 SING Y N 6
AY3 C12 C11 DOUB Y N 7
AY3 C9 C8 SING N N 8
AY3 C9 C10 DOUB Y N 9
AY3 C11 C10 SING Y N 10
AY3 C8 C1 DOUB N E 11
AY3 O C DOUB N N 12
AY3 C1 C SING N N 13
AY3 C1 C2 SING N N 14
AY3 C N SING N N 15
AY3 C2 C7 DOUB Y N 16
AY3 C2 C3 SING Y N 17
AY3 C7 C6 SING Y N 18
AY3 N C3 SING N N 19
AY3 C3 C4 DOUB Y N 20
AY3 C6 C5 DOUB Y N 21
AY3 C4 C5 SING Y N 22
AY3 C15 H1 SING N N 23
AY3 C14 H2 SING N N 24
AY3 C11 H3 SING N N 25
AY3 C10 H4 SING N N 26
AY3 O1 H5 SING N N 27
AY3 C8 H6 SING N N 28
AY3 C7 H7 SING N N 29
AY3 N H8 SING N N 30
AY3 C6 H9 SING N N 31
AY3 C5 H10 SING N N 32
AY3 C4 H11 SING N N 33
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
AY3 InChI InChI 1.06 "InChI=1S/C16H11NO3/c18-15-13(12-3-1-2-4-14(12)17-15)9-10-5-7-11(8-6-10)16(19)20/h1-9H,(H,17,18)(H,19,20)/b13-9+"
AY3 InChIKey InChI 1.06 YILTUWKDVMACDH-UKTHLTGXSA-N
AY3 SMILES_CANONICAL CACTVS 3.385 "OC(=O)c1ccc(cc1)\C=C2\C(=O)Nc3ccccc23"
AY3 SMILES CACTVS 3.385 "OC(=O)c1ccc(cc1)C=C2C(=O)Nc3ccccc23"
AY3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)/C(=C\c3ccc(cc3)C(=O)O)/C(=O)N2"
AY3 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)C(=Cc3ccc(cc3)C(=O)O)C(=O)N2"
#
_pdbx_chem_comp_identifier.comp_id AY3
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "4-[(~{E})-(2-oxidanylidene-1~{H}-indol-3-ylidene)methyl]benzoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
AY3 "Create component" 2021-12-06 PDBE
AY3 "Modify descriptor" 2022-08-22 RCSB
AY3 "Initial release" 2022-12-21 RCSB
#