data_AZ1 # _chem_comp.id AZ1 _chem_comp.name "AZELAIC ACID" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H16 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2004-07-07 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 188.221 _chem_comp.one_letter_code ? _chem_comp.three_letter_code AZ1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1TUF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal AZ1 C C1 C 0 1 N N N Y Y Y 45.598 29.746 12.034 0.153 0.000 4.978 C1 AZ1 1 AZ1 C2 C2 C 0 1 N N N Y N N 46.950 29.880 12.760 -0.716 0.000 3.747 C2 AZ1 2 AZ1 C3 C3 C 0 1 N N N Y N N 48.484 30.087 12.695 0.167 0.000 2.498 C3 AZ1 3 AZ1 C4 C4 C 0 1 N N N Y N N 49.559 30.168 13.799 -0.716 0.000 1.249 C4 AZ1 4 AZ1 C5 C5 C 0 1 N N N Y N N 50.998 29.633 13.652 0.167 0.000 0.000 C5 AZ1 5 AZ1 C6 C6 C 0 1 N N N Y N N 52.040 30.144 14.670 -0.715 0.000 -1.249 C6 AZ1 6 AZ1 C7 C7 C 0 1 N N N Y N N 53.553 30.394 14.528 0.167 0.000 -2.498 C7 AZ1 7 AZ1 C8 C8 C 0 1 N N N Y N N 54.433 29.784 13.433 -0.715 0.000 -3.747 C8 AZ1 8 AZ1 C9 C9 C 0 1 N N N Y Y Y 54.585 30.560 12.110 0.154 0.000 -4.978 C9 AZ1 9 AZ1 OXT O1 O 0 1 N Y N Y Y Y 44.446 29.550 12.708 -0.407 0.000 6.197 O1 AZ1 10 AZ1 O O2 O 0 1 N N N Y Y Y 45.559 29.820 10.811 1.357 0.000 4.867 O2 AZ1 11 AZ1 O2 O3 O 0 1 N N N Y Y Y 54.114 29.995 10.925 1.357 0.000 -4.867 O3 AZ1 12 AZ1 OXT2 O4 O 0 1 N Y N Y Y Y 55.146 31.677 12.165 -0.407 0.000 -6.197 O4 AZ1 13 AZ1 H21 H21 H 0 1 N N N Y N N 46.691 30.711 13.456 -1.345 0.890 3.747 H21 AZ1 14 AZ1 H22 H22 H 0 1 N N N Y N N 46.927 28.931 13.346 -1.345 -0.890 3.747 H22 AZ1 15 AZ1 H31 H31 H 0 1 N N N Y N N 48.845 29.282 12.012 0.796 -0.890 2.498 H31 AZ1 16 AZ1 H32 H32 H 0 1 N N N Y N N 48.613 31.027 12.110 0.796 0.890 2.498 H32 AZ1 17 AZ1 H41 H41 H 0 1 N N N Y N N 49.639 31.239 14.097 -1.345 0.890 1.249 H41 AZ1 18 AZ1 H42 H42 H 0 1 N N N Y N N 49.126 29.692 14.709 -1.345 -0.890 1.249 H42 AZ1 19 AZ1 H51 H51 H 0 1 N N N Y N N 50.983 28.518 13.661 0.796 -0.890 0.000 H51 AZ1 20 AZ1 H52 H52 H 0 1 N N N Y N N 51.363 29.825 12.616 0.796 0.890 0.000 H52 AZ1 21 AZ1 H61 H61 H 0 1 N N N Y N N 51.625 31.111 15.038 -1.345 0.890 -1.249 H61 AZ1 22 AZ1 H62 H62 H 0 1 N N N Y N N 51.946 29.454 15.541 -1.345 -0.890 -1.249 H62 AZ1 23 AZ1 H71 H71 H 0 1 N N N Y N N 53.696 31.498 14.481 0.796 -0.890 -2.498 H71 AZ1 24 AZ1 H72 H72 H 0 1 N N N Y N N 54.019 30.126 15.505 0.796 0.890 -2.498 H72 AZ1 25 AZ1 H81 H81 H 0 1 N N N Y N N 55.444 29.574 13.852 -1.345 0.890 -3.747 H81 AZ1 26 AZ1 H82 H82 H 0 1 N N N Y N N 54.077 28.750 13.211 -1.345 -0.890 -3.747 H82 AZ1 27 AZ1 HXT HO1 H 0 1 N Y N Y Y Y 43.612 29.467 12.260 0.150 0.000 6.986 HO1 AZ1 28 AZ1 HXT2 HO4 H 0 1 N Y N Y Y Y 55.239 32.155 11.349 0.150 0.000 -6.986 HO4 AZ1 29 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AZ1 C C2 SING N N 1 AZ1 C OXT SING N N 2 AZ1 C O DOUB N N 3 AZ1 C2 C3 SING N N 4 AZ1 C2 H21 SING N N 5 AZ1 C2 H22 SING N N 6 AZ1 C3 C4 SING N N 7 AZ1 C3 H31 SING N N 8 AZ1 C3 H32 SING N N 9 AZ1 C4 C5 SING N N 10 AZ1 C4 H41 SING N N 11 AZ1 C4 H42 SING N N 12 AZ1 C5 C6 SING N N 13 AZ1 C5 H51 SING N N 14 AZ1 C5 H52 SING N N 15 AZ1 C6 C7 SING N N 16 AZ1 C6 H61 SING N N 17 AZ1 C6 H62 SING N N 18 AZ1 C7 C8 SING N N 19 AZ1 C7 H71 SING N N 20 AZ1 C7 H72 SING N N 21 AZ1 C8 C9 SING N N 22 AZ1 C8 H81 SING N N 23 AZ1 C8 H82 SING N N 24 AZ1 C9 O2 DOUB N N 25 AZ1 C9 OXT2 SING N N 26 AZ1 OXT HXT SING N N 27 AZ1 OXT2 HXT2 SING N N 28 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor AZ1 SMILES ACDLabs 10.04 "O=C(O)CCCCCCCC(=O)O" AZ1 SMILES_CANONICAL CACTVS 3.341 "OC(=O)CCCCCCCC(O)=O" AZ1 SMILES CACTVS 3.341 "OC(=O)CCCCCCCC(O)=O" AZ1 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C(CCCC(=O)O)CCCC(=O)O" AZ1 SMILES "OpenEye OEToolkits" 1.5.0 "C(CCCC(=O)O)CCCC(=O)O" AZ1 InChI InChI 1.03 "InChI=1S/C9H16O4/c10-8(11)6-4-2-1-3-5-7-9(12)13/h1-7H2,(H,10,11)(H,12,13)" AZ1 InChIKey InChI 1.03 BDJRBEYXGGNYIS-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier AZ1 "SYSTEMATIC NAME" ACDLabs 10.04 "nonanedioic acid" AZ1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "nonanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site AZ1 "Create component" 2004-07-07 RCSB AZ1 "Modify descriptor" 2011-06-04 RCSB AZ1 "Modify backbone" 2023-11-03 PDBE AZ1 "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id AZ1 _pdbx_chem_comp_pcm.modified_residue_id ? _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Non-standard residue" _pdbx_chem_comp_pcm.position "Amino-acid side chain and backbone" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #