data_AZK # _chem_comp.id AZK _chem_comp.name "(S)-2-AMINO-6-AZIDOHEXANOIC ACID" _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C6 H14 N4 O" _chem_comp.mon_nstd_parent_comp_id LYS _chem_comp.pdbx_synonyms EPSILON-AZIDO-LYSINE _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2005-08-04 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 158.202 _chem_comp.one_letter_code K _chem_comp.three_letter_code AZK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal AZK N N N 0 1 N N N Y Y N 23.399 -8.039 4.906 2.846 1.437 0.117 N AZK 1 AZK CA CA C 0 1 N N S Y N N 23.199 -7.794 3.487 2.592 -0.002 0.267 CA AZK 2 AZK CB CB C 0 1 N N N N N N 24.503 -7.776 2.723 1.297 -0.370 -0.460 CB AZK 3 AZK CG CG C 0 1 N N N N N N 25.483 -6.717 3.191 0.115 0.323 0.220 CG AZK 4 AZK CD CD C 0 1 N N N N N N 26.818 -7.059 2.551 -1.179 -0.046 -0.507 CD AZK 5 AZK CE CE C 0 1 N N N N N N 27.424 -5.860 1.839 -2.362 0.647 0.173 CE AZK 6 AZK NZ NZ N 0 1 N N N N N N 27.976 -5.039 2.883 -3.601 0.294 -0.523 NZ AZK 7 AZK NZ2 NZ2 N 1 1 N N N N N N 28.627 -5.655 3.688 -4.427 -0.231 0.030 NZ2 AZK 8 AZK NZ3 NZ3 N -1 1 N N N N N N 29.226 -6.268 4.415 -5.253 -0.756 0.583 NZ3 AZK 9 AZK C C C 0 1 N N N Y N Y 22.290 -8.795 2.818 3.757 -0.791 -0.334 C AZK 10 AZK O O O 0 1 N N N Y N Y 21.458 -8.408 2.008 4.944 -0.535 0.420 O AZK 11 AZK H 1HN H 0 1 N N N Y Y N 24.254 -7.611 5.201 2.927 1.615 -0.873 H AZK 12 AZK H2 2HN H 0 1 N Y N Y Y N 23.445 -9.024 5.071 2.013 1.913 0.430 H2 AZK 13 AZK HA HA H 0 1 N N N Y N N 22.719 -6.805 3.454 2.496 -0.245 1.326 HA AZK 14 AZK HB2 1HB H 0 1 N N N N N N 24.256 -7.542 1.677 1.360 -0.046 -1.499 HB2 AZK 15 AZK HB3 2HB H 0 1 N N N N N N 24.982 -8.759 2.847 1.155 -1.450 -0.424 HB3 AZK 16 AZK HG2 1HG H 0 1 N N N N N N 25.559 -6.702 4.288 0.053 -0.001 1.259 HG2 AZK 17 AZK HG3 2HG H 0 1 N N N N N N 25.149 -5.717 2.877 0.257 1.403 0.185 HG3 AZK 18 AZK HD2 1HD H 0 1 N N N N N N 26.650 -7.852 1.807 -1.117 0.278 -1.546 HD2 AZK 19 AZK HD3 2HD H 0 1 N N N N N N 27.512 -7.391 3.337 -1.322 -1.126 -0.471 HD3 AZK 20 AZK HE2 1HE H 0 1 N N N N N N 26.675 -5.316 1.244 -2.424 0.323 1.212 HE2 AZK 21 AZK HE3 2HE H 0 1 N N N N N N 28.206 -6.177 1.134 -2.220 1.727 0.138 HE3 AZK 22 AZK HC1 1H H 0 1 N N N Y N Y 21.686 -9.197 3.645 3.529 -1.856 -0.302 HC1 AZK 23 AZK HC2 2H H 0 1 N N N Y N Y 22.946 -9.492 2.276 3.910 -0.482 -1.368 HC2 AZK 24 AZK HO HO H 0 1 N N N Y N Y 20.618 -8.308 2.440 5.652 -1.050 0.009 HO AZK 25 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AZK N CA SING N N 1 AZK N H SING N N 2 AZK N H2 SING N N 3 AZK CA CB SING N N 4 AZK CA C SING N N 5 AZK CA HA SING N N 6 AZK CB CG SING N N 7 AZK CB HB2 SING N N 8 AZK CB HB3 SING N N 9 AZK CG CD SING N N 10 AZK CG HG2 SING N N 11 AZK CG HG3 SING N N 12 AZK CD CE SING N N 13 AZK CD HD2 SING N N 14 AZK CD HD3 SING N N 15 AZK CE NZ SING N N 16 AZK CE HE2 SING N N 17 AZK CE HE3 SING N N 18 AZK NZ NZ2 DOUB N N 19 AZK NZ2 NZ3 DOUB N N 20 AZK C O SING N N 21 AZK C HC1 SING N N 22 AZK C HC2 SING N N 23 AZK O HO SING N N 24 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor AZK SMILES ACDLabs 10.04 "[N-]=[N+]=N/CCCCC(N)CO" AZK SMILES_CANONICAL CACTVS 3.341 "N[C@H](CO)CCCCN=[N+]=[N-]" AZK SMILES CACTVS 3.341 "N[CH](CO)CCCCN=[N+]=[N-]" AZK SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C(CCN=[N+]=[N-])C[C@@H](CO)N" AZK SMILES "OpenEye OEToolkits" 1.5.0 "C(CCN=[N+]=[N-])CC(CO)N" AZK InChI InChI 1.03 "InChI=1S/C6H14N4O/c7-6(5-11)3-1-2-4-9-10-8/h6,11H,1-5,7H2/t6-/m0/s1" AZK InChIKey InChI 1.03 RZPRHTBHWVNFLM-LURJTMIESA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier AZK "SYSTEMATIC NAME" ACDLabs 10.04 "(2S)-2-amino-6-azidohexan-1-ol" AZK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-amino-6-azido-hexan-1-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site AZK "Create component" 2005-08-04 RCSB AZK "Modify descriptor" 2011-06-04 RCSB AZK "Modify synonyms" 2020-06-05 PDBE AZK "Modify backbone" 2023-11-03 PDBE AZK "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id AZK _pdbx_chem_comp_synonyms.name EPSILON-AZIDO-LYSINE _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? #