data_AZS # _chem_comp.id AZS _chem_comp.name O-DIAZOACETYL-L-SERINE _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C5 H7 N3 O4" _chem_comp.mon_nstd_parent_comp_id SER _chem_comp.pdbx_synonyms ASASERINE _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2007-09-20 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 173.127 _chem_comp.one_letter_code S _chem_comp.three_letter_code AZS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2Z8J _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal AZS O O O 0 1 N N N N N N 12.420 -33.880 -22.754 -3.471 -1.374 -0.740 O AZS 1 AZS C C C 0 1 N N N N N N 13.652 -33.939 -22.958 -3.105 -0.293 -0.033 C AZS 2 AZS OXT OXT O 0 1 N Y N N N N 14.530 -33.289 -22.357 -3.759 0.053 0.922 OXT AZS 3 AZS CA CA C 0 1 N N S N N N 14.125 -34.898 -24.058 -1.880 0.488 -0.430 CA AZS 4 AZS N N N 0 1 N N N N N N 13.101 -35.935 -24.249 -1.949 1.836 0.149 N AZS 5 AZS CB CB C 0 1 N N N N N N 14.324 -34.110 -25.356 -0.629 -0.226 0.088 CB AZS 6 AZS OG OG O 0 1 N N N N N N 14.847 -34.944 -26.401 0.536 0.450 -0.387 OG AZS 7 AZS CH CH C 0 1 N N N N N N 14.905 -34.211 -27.626 1.734 -0.057 -0.017 CH AZS 8 AZS CI CI C 0 1 N N N N N N 15.018 -35.181 -28.799 2.917 0.556 -0.446 CI AZS 9 AZS NJ NJ N 1 1 N N N N N N 16.343 -35.838 -28.747 4.024 0.086 -0.104 NJ AZS 10 AZS NK NK N -1 1 N N N N N N 17.549 -36.577 -28.834 5.020 -0.335 0.204 NK AZS 11 AZS OH OH O 0 1 N N N N N N 16.049 -33.349 -27.605 1.783 -1.048 0.691 OH AZS 12 AZS HO HO H 0 1 N N N N N N 12.243 -33.256 -22.060 -4.264 -1.843 -0.447 HO AZS 13 AZS HA HA H 0 1 N N N N N N 15.077 -35.370 -23.775 -1.832 0.562 -1.517 HA AZS 14 AZS HN1 1HN H 0 1 N N N N N N 12.868 -36.000 -25.219 -2.731 2.352 -0.227 HN1 AZS 15 AZS HN2 2HN H 0 1 N N N N N N 13.455 -36.815 -23.932 -1.994 1.795 1.156 HN2 AZS 16 AZS HB1 1HB H 0 1 N N N N N N 13.353 -33.705 -25.678 -0.634 -0.221 1.178 HB1 AZS 17 AZS HB2 2HB H 0 1 N N N N N N 15.045 -33.301 -25.164 -0.624 -1.255 -0.271 HB2 AZS 18 AZS HI HI H 0 1 N N N N N N 14.257 -35.359 -29.544 2.874 1.434 -1.073 HI AZS 19 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AZS O HO SING N N 1 AZS O C SING N N 2 AZS C OXT DOUB N N 3 AZS C CA SING N N 4 AZS CA HA SING N N 5 AZS CA N SING N N 6 AZS CA CB SING N N 7 AZS N HN1 SING N N 8 AZS N HN2 SING N N 9 AZS CB HB1 SING N N 10 AZS CB HB2 SING N N 11 AZS CB OG SING N N 12 AZS OG CH SING N N 13 AZS CH OH DOUB N N 14 AZS CH CI SING N N 15 AZS CI HI SING N N 16 AZS CI NJ DOUB N N 17 AZS NJ NK DOUB N N 18 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor AZS SMILES ACDLabs 10.04 "O=C(OCC(N)C(=O)O)\C=[N+]=[N-]" AZS SMILES_CANONICAL CACTVS 3.341 "N[C@@H](COC(=O)C=[N+]=[N-])C(O)=O" AZS SMILES CACTVS 3.341 "N[CH](COC(=O)C=[N+]=[N-])C(O)=O" AZS SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@@H](C(=O)O)N)OC(=O)C=[N+]=[N-]" AZS SMILES "OpenEye OEToolkits" 1.5.0 "C(C(C(=O)O)N)OC(=O)C=[N+]=[N-]" AZS InChI InChI 1.03 "InChI=1S/C5H7N3O4/c6-3(5(10)11)2-12-4(9)1-8-7/h1,3H,2,6H2,(H,10,11)/t3-/m0/s1" AZS InChIKey InChI 1.03 MZZGOOYMKKIOOX-VKHMYHEASA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier AZS "SYSTEMATIC NAME" ACDLabs 10.04 "O-(diazoacetyl)-L-serine" AZS "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-amino-3-(2-diazoethanoyloxy)propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site AZS "Create component" 2007-09-20 EBI AZS "Modify descriptor" 2011-06-04 RCSB AZS "Modify synonyms" 2020-06-05 PDBE AZS "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id AZS _pdbx_chem_comp_synonyms.name ASASERINE _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id AZS _pdbx_chem_comp_pcm.modified_residue_id THR _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom CH _pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG1 _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #